FFCP PHASE1:Hg19::chr15:52821020..52821025,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4644|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7602|TSSclassifier=S|UniProt=G3V394|association_with_transcript=12bp_to_ENST00000553916_5end|description=CAGE_peak_5_at_MYO5A_5end|id=chr15:52821020..52821025,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;3.96e-14;5!CL:0000235;8.62e-12;6!CL:0000163;7.00e-08;9!CL:0000148;6.14e-07;10|ontology_enrichment_celltype_v019_2=CL:0000097,1.85e-14,5;CL:0002028,1.85e-14,5;CL:0000235,1.14e-11,6;CL:0000163,4.65e-08,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!7.12e-19!41;UBERON:0001890!7.12e-19!41;UBERON:0006240!7.12e-19!41;UBERON:0001049!1.50e-18!57;UBERON:0005068!1.50e-18!57;UBERON:0006241!1.50e-18!57;UBERON:0007135!1.50e-18!57;UBERON:0001017!2.84e-18!82;UBERON:0003080!5.56e-18!42;UBERON:0001869!2.10e-17!32;UBERON:0005743!3.38e-17!86;UBERON:0000955!1.58e-16!69;UBERON:0006238!1.58e-16!69;UBERON:0001893!3.19e-16!34;UBERON:0002616!5.94e-16!59;UBERON:0002791!1.73e-15!33;UBERON:0000073!2.08e-15!94;UBERON:0001016!2.08e-15!94;UBERON:0002020!2.67e-15!34;UBERON:0003528!2.67e-15!34;UBERON:0002619!2.18e-13!22;UBERON:0000956!2.35e-13!25;UBERON:0000203!2.35e-13!25;UBERON:0001950!2.12e-12!20;UBERON:0003075!5.83e-12!86;UBERON:0007284!5.83e-12!86;UBERON:0003056!2.37e-11!61;UBERON:0000033!1.76e-10!123;UBERON:0002346!1.87e-10!90;UBERON:0000153!7.94e-10!129;UBERON:0007811!7.94e-10!129;UBERON:0007023!4.26e-09!115;UBERON:0004121!1.70e-08!169;UBERON:0000924!1.12e-07!173;UBERON:0006601!1.12e-07!173|ontology_enrichment_uberon_v019=UBERON:0001950;9.43e-44;20!UBERON:0002619;1.22e-39;22!UBERON:0001869;1.94e-37;32!UBERON:0001893;5.37e-37;34!UBERON:0000956;1.17e-34;25!UBERON:0000203;1.17e-34;25!UBERON:0002791;1.00e-33;32!UBERON:0003528;7.16e-32;34!UBERON:0002020;7.16e-32;34!UBERON:0000200;2.70e-26;6!UBERON:0002780;9.18e-22;41!UBERON:0001890;9.18e-22;41!UBERON:0000073;1.81e-16;53!UBERON:0002616;1.81e-16;53!UBERON:0000955;2.85e-14;68!UBERON:0001870;3.41e-14;3!UBERON:0001872;8.52e-14;5!UBERON:0001017;1.19e-11;75!UBERON:0001871;3.56e-10;6!UBERON:0000369;3.96e-10;4!UBERON:0002435;3.96e-10;4!UBERON:0000204;3.96e-10;4!UBERON:0002771;5.38e-10;2!UBERON:0002702;6.87e-10;2!UBERON:0001016;1.98e-09;83!UBERON:0002021;9.18e-09;5!UBERON:0002420;1.05e-07;9!UBERON:0007245;1.05e-07;9!UBERON:0010009;1.05e-07;9!UBERON:0010011;1.05e-07;9!UBERON:0000454;1.05e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.78e-44,20;UBERON:0001869,1.02e-43,32;UBERON:0001893,5.95e-41,34;UBERON:0002619,9.05e-40,22;UBERON:0002791,6.20e-39,32;UBERON:0003528,1.85e-36,34;UBERON:0002020,1.85e-36,34;UBERON:0000956,9.02e-35,25;UBERON:0000203,9.02e-35,25;UBERON:0002780,2.39e-33,41;UBERON:0001890,2.39e-33,41;UBERON:0003080,2.39e-33,41;UBERON:0006240,2.39e-33,41;UBERON:0000073,1.04e-27,53;UBERON:0002616,1.04e-27,53;UBERON:0000200,4.87e-26,6;UBERON:0001049,5.38e-26,56;UBERON:0005068,5.38e-26,56;UBERON:0006241,5.38e-26,56;UBERON:0007135,5.38e-26,56;UBERON:0000955,1.32e-22,68;UBERON:0006238,1.32e-22,68;UBERON:0001017,2.14e-22,81;UBERON:0003056,4.24e-21,61;UBERON:0001016,1.16e-19,89;UBERON:0003075,2.41e-16,82;UBERON:0007284,2.41e-16,82;UBERON:0002346,2.25e-15,86;UBERON:0001870,4.50e-14,3;UBERON:0001872,9.53e-14,5;UBERON:0007023,4.23e-12,114;UBERON:0010371,6.15e-12,104;UBERON:0000369,2.11e-10,4;UBERON:0002435,2.11e-10,4;UBERON:0000204,2.11e-10,4;UBERON:0010082,2.11e-10,4;UBERON:0001871,2.32e-10,6;UBERON:0002771,5.42e-10,2;UBERON:0002702,1.01e-09,2;UBERON:0010314,1.48e-09,132;UBERON:0002021,8.89e-09,5;UBERON:0002420,5.49e-08,9;UBERON:0007245,5.49e-08,9;UBERON:0010009,5.49e-08,9;UBERON:0010011,5.49e-08,9;UBERON:0000454,5.49e-08,9;UBERON:0004121,6.78e-08,171;UBERON:0000924,6.78e-08,171;UBERON:0006601,6.78e-08,171|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0.684372125364421,0,0,0.0821005894499457,0.157421562627358,0.786728553697808,0.767658796194425,0,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0.401088894940283,0.434021741431704,0.447830948479849,0.971680998056939,0.515151135268373,0,0.755751887377619,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.344745680736619,0,2.70852973188684,0,0,0.449446968890169,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0.637812899895131,0.209658645508376,0.673971786878971,0.300353785683013,0.48217676009124,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0.294605907474837,0,0.812411591295047,0.25618263945135,0,0,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0.383959833463255,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7602 | |||
|TSSclassifier=S | |||
|UniProt=G3V394 | |||
|association_with_transcript=12bp_to_ENST00000553916_5end | |||
|description=CAGE_peak_5_at_MYO5A_5end | |||
|id=chr15:52821020..52821025,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.96e-14;5!CL:0000235;8.62e-12;6!CL:0000163;7.00e-08;9!CL:0000148;6.14e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.85e-14,5;CL:0002028,1.85e-14,5;CL:0000235,1.14e-11,6;CL:0000163,4.65e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p5@MYO5A | |||
}} |
Revision as of 07:27, 11 September 2013
Short description: | p5@MYO5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MYO5A_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000553916_5end |
EntrezGene: | MYO5A |
HGNC: | 7602 |
UniProt: | G3V394 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.85e-14 | 5 |
basophil mast progenitor cell | 1.85e-14 | 5 |
macrophage | 1.14e-11 | 6 |
endocrine cell | 4.65e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.