FFCP PHASE1:Hg19::chr15:56365697..56365717,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2339|description=CAGE_peak_at_chr15:56365697..56365717,+|id=chr15:56365697..56365717,+|ontology_enrichment_celltype=CL:0002322!1.67e-17!5;CL:1000415!1.17e-07!2;CL:0000159!2.37e-07!2;CL:0002535!4.19e-07!2|ontology_enrichment_celltype_v019=CL:0002322;3.58e-52;5!CL:0002321;1.98e-17;15!CL:0000148;5.03e-10;10!CL:0000540;3.51e-08;6!CL:0000404;3.51e-08;6!CL:0000147;2.65e-07;14!CL:1000415;8.93e-07;2|ontology_enrichment_celltype_v019_2=CL:0002322,1.90e-52,5;CL:0000148,4.81e-10,10;CL:0000541,4.81e-10,10;CL:0000540,3.51e-08,6;CL:0000031,3.51e-08,6;CL:0000404,3.51e-08,6;CL:0000147,2.57e-07,14;CL:1000415,8.93e-07,2|ontology_enrichment_development_v019=CL:0000031;3.51e-08;6|ontology_enrichment_disease=DOID:4362!3.99e-10!5;DOID:299!7.71e-09!25;DOID:120!7.79e-08!27;DOID:5093!8.98e-08!4;DOID:1612!8.98e-08!4;DOID:4468!1.96e-07!2;DOID:193!3.50e-07!29;DOID:305!6.13e-07!106|ontology_enrichment_disease_v019=DOID:3151;5.04e-12;1!DOID:3149;5.04e-12;1|ontology_enrichment_disease_v019_2=DOID:3151,4.53e-12,1;DOID:3149,4.53e-12,1|ontology_enrichment_uberon=UBERON:0006331!3.60e-09!3;UBERON:0000002!1.92e-08!6;UBERON:0001560!1.92e-08!6;UBERON:0002308!7.79e-08!9;UBERON:0000125!7.79e-08!9;UBERON:0000310!1.01e-07!10;UBERON:0002950!4.19e-07!2;UBERON:0006955!4.19e-07!2;UBERON:0004801!4.19e-07!2;UBERON:0001891!4.19e-07!2;UBERON:0009616!4.19e-07!2;UBERON:0001443!5.49e-07!11;UBERON:0003100!6.83e-07!41|ontology_enrichment_uberon_v019=UBERON:0000922;1.82e-12;49|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0,3.17131635936948,1.98794652482228,1.51052125730374,1.34759371519982,3.5324919122588,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.979396848954886,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.293977192243133,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,6.6487470129833,0.320635281006135,0,0,0.432271251462318,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,4.26372253451425,4.56984371832104,0,0,0,2.68347750079413,1.02447419488958,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,1.82631744101899,0,0,0,0,0,0,0,0,0,2.07377898544228,0,0,0,0,0.4582137370881,0,0,0.671132590786754,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.504665699340316,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0.112131862580613,0,0.202117188958219,0,1.36893320434112,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr15:56365697..56365717,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2339 | |||
|description=CAGE_peak_at_chr15:56365697..56365717,+ | |||
|id=chr15:56365697..56365717,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.67e-17!5;CL:1000415!1.17e-07!2;CL:0000159!2.37e-07!2;CL:0002535!4.19e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.58e-52;5!CL:0002321;1.98e-17;15!CL:0000148;5.03e-10;10!CL:0000540;3.51e-08;6!CL:0000404;3.51e-08;6!CL:0000147;2.65e-07;14!CL:1000415;8.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.90e-52,5;CL:0000148,4.81e-10,10;CL:0000541,4.81e-10,10;CL:0000540,3.51e-08,6;CL:0000031,3.51e-08,6;CL:0000404,3.51e-08,6;CL:0000147,2.57e-07,14;CL:1000415,8.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;3.51e-08;6 | |||
|ontology_enrichment_disease=DOID:4362!3.99e-10!5;DOID:299!7.71e-09!25;DOID:120!7.79e-08!27;DOID:5093!8.98e-08!4;DOID:1612!8.98e-08!4;DOID:4468!1.96e-07!2;DOID:193!3.50e-07!29;DOID:305!6.13e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.04e-12;1!DOID:3149;5.04e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.53e-12,1;DOID:3149,4.53e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0006331!3.60e-09!3;UBERON:0000002!1.92e-08!6;UBERON:0001560!1.92e-08!6;UBERON:0002308!7.79e-08!9;UBERON:0000125!7.79e-08!9;UBERON:0000310!1.01e-07!10;UBERON:0002950!4.19e-07!2;UBERON:0006955!4.19e-07!2;UBERON:0004801!4.19e-07!2;UBERON:0001891!4.19e-07!2;UBERON:0009616!4.19e-07!2;UBERON:0001443!5.49e-07!11;UBERON:0003100!6.83e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.82e-12;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0,3.17131635936948,1.98794652482228,1.51052125730374,1.34759371519982,3.5324919122588,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.979396848954886,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.293977192243133,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,6.6487470129833,0.320635281006135,0,0,0.432271251462318,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.643012593860077,4.26372253451425,4.56984371832104,0,0,0,2.68347750079413,1.02447419488958,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0.314231179832004,0,1.82631744101899,0,0,0,0,0,0,0,0,0,2.07377898544228,0,0,0,0,0.4582137370881,0,0,0.671132590786754,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.504665699340316,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0.112131862580613,0,0.202117188958219,0,1.36893320434112,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr15:56365697..56365717,+ | |||
}} |
Revision as of 07:31, 11 September 2013
Short description: | p@chr15:56365697..56365717, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:56365697..56365717, + |
Coexpression cluster: | C2339_iPS_gall_H9_keratoacanthoma_HES3GFP_colon_kidney |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.90e-52 | 5 |
melanocyte | 4.81e-10 | 10 |
melanoblast | 4.81e-10 | 10 |
neuron | 3.51e-08 | 6 |
neuroblast | 3.51e-08 | 6 |
electrically signaling cell | 3.51e-08 | 6 |
pigment cell | 2.57e-07 | 14 |
epithelial cell of gall bladder | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.53e-12 | 1 |
keratoacanthoma | 4.53e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.