FFCP PHASE1:Hg19::chr15:59397366..59397381,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9133|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1580|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_ENST00000559622_5end|coexpression_cluster_id=C109|description=CAGE_peak_2_at_CCNB2_5end|id=chr15:59397366..59397381,+|ontology_enrichment_celltype=CL:0000548!5.09e-19!679;CL:0000004!5.09e-19!679;CL:0000255!5.09e-19!679;CL:0000012!1.73e-18!682;CL:0000066!2.29e-18!254;CL:0000003!1.69e-10!722;CL:0000055!2.54e-09!180;CL:0002321!2.85e-09!248;CL:0000220!1.05e-08!246;CL:0000063!5.17e-08!578;CL:0002319!2.49e-07!25;CL:0000133!5.83e-07!59;CL:0000333!7.32e-07!41|ontology_enrichment_celltype_v019=CL:0002319;1.82e-07;25|ontology_enrichment_celltype_v019_2=CL:0000066,5.41e-17,253;CL:0002321,6.10e-08,250;CL:0002319,1.62e-07,25;CL:0000333,6.56e-07,41|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!4.79e-48!235;DOID:14566!6.03e-47!239;DOID:0050687!4.03e-24!143;DOID:0050686!9.07e-22!137;DOID:305!8.57e-19!106;DOID:2531!8.73e-17!51;DOID:0060083!8.73e-17!51;DOID:1240!9.81e-13!39;DOID:8692!4.77e-09!31|ontology_enrichment_disease_v019=DOID:2531;1.04e-10;51!DOID:0060083;1.04e-10;51!DOID:1240;1.76e-10;39!DOID:8692;3.84e-09;31|ontology_enrichment_disease_v019_2=DOID:162,2.36e-47,235;DOID:14566,4.66e-46,239;DOID:0050687,1.44e-23,143;DOID:0050686,8.25e-21,137;DOID:305,2.21e-18,106;DOID:2531,2.80e-17,51;DOID:0060083,2.80e-17,51;DOID:1240,4.26e-13,39;DOID:8692,2.73e-09,31|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001737;9.05e-07;9!UBERON:0001557;9.05e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.37e-07,9|phase1_expression=0,0.856402095563933,0.281908808191942,2.00146596706261,0,0,5.06599756336621,0,0,5.16041266653169,2.79120467188971,10.0483031179879,4.48403862988371,1.98026164736075,1.65698687863958,0,2.41077811209591,0.730310090387373,0,12.5583479238324,7.14002419354885,2.5076377718247,19.1778111377808,21.3524103113699,20.7145355331425,8.40547463227464,11.2477807546426,10.4685339147193,0,0,0.309632246632152,9.19421224478927,6.32532429434325,4.06729411183466,21.2260129590026,15.4964463411289,2.64240395401362,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0,0,0,5.26768169550154,0.196709770113833,0,0,0.501559486172034,0,0,0,5.79334375802903,0.294605907474837,0.664601683750863,0.541607727530031,3.71464827204458,4.1618991219161,8.71520894399483,8.5668505513613,8.40428948631652,0.14828656316206,0,0,7.25179793264424,0.383220493601921,0,0,0,0,0,0,0,0,0.473554504088034,0,0.403213486449465,0.267440195783507,0,0,7.37770945674,7.54389114876829,31.8066454098418,4.51204119572301,3.33146993609895,13.5198610998687,0.486634870302636,10.8715039738678,4.43458794925128,5.62142628436007,2.48860243445654,5.10013403609559,8.52804218404188,0.324547393654683,0,0,0,0,0,4.77029777680092,9.46258054616737,8.33137203858226,2.26123176769604,2.93649605346934,6.60283300656162,6.68783892917794,1.55050055501597,0.71153252537342,1.00416183829401,6.0424397566372,2.28081631715554,1.95249646038536,11.0298924103761,0,10.6266676658055,11.2264686313085,8.22063807528252,1.53316637465883,3.79706263827252,3.48083313467774,0,0,5.23312862571041,0.496971951695318,6.33152558322899,0.397227542439656,6.3104056564739,10.9947198481491,3.36406560085384,1.06748995729705,0.98667019366864,3.7345324247972,3.63718814588158,13.2404141521902,2.4217188423189,0.576175924479999,12.1847144553574,2.49728061464256,10.8389646093445,1.64393548606981,12.9177948508141,11.3311061057692,15.3091379305451,4.28723759635276,11.0550885580591,1.54988671763648,2.37600571456411,2.71993622206413,6.37112953356618,3.59309070908119,11.1101835209684,8.88341491090946,5.26421819419948,13.1693286264251,6.43624371177941,1.50238058906597,12.8178366970824,20.6298081042191,1.70845911054854,2.54318281391474,16.8051013807265,5.46178404963726,1.54584324027377,1.8611685633159,14.0084355760251,11.2052555935378,11.3595198409852,1.19664868234989,1.93975268182574,13.845374108148,14.1052937518696,22.5515587772949,0.57978255948989,3.00020732649918,2.29443676311203,18.9059244500873,25.7107750543681,22.6578188595561,18.9699730678128,22.7088765788066,25.9133924943839,3.12899064659632,2.57296375277154,8.28809528114883,0,0,22.1233716074508,21.9160097101532,20.485937540096,19.6323271463661,23.9667388501647,20.8798144817765,18.2022266016222,24.3314616755429,19.6221050042659,8.11971000087113,0,2.4694440679884,0,0,0.982827216677626,0.590789906681404,29.1365645613669,9.59309820636286,6.51957679134397,0.658501712451753,3.37205259772859,7.74073087569557,4.90718759340207,9.44844085399942,4.15973914111831,5.77325368101093,8.46291956318061,1.52631302506568,4.61972632835436,5.09284063834272,3.23432058798817,10.2726571734706,8.58486162094873,0.24621700608739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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1580 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000559622_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_CCNB2_5end | |||
|id=chr15:59397366..59397381,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.09e-19!679;CL:0000004!5.09e-19!679;CL:0000255!5.09e-19!679;CL:0000012!1.73e-18!682;CL:0000066!2.29e-18!254;CL:0000003!1.69e-10!722;CL:0000055!2.54e-09!180;CL:0002321!2.85e-09!248;CL:0000220!1.05e-08!246;CL:0000063!5.17e-08!578;CL:0002319!2.49e-07!25;CL:0000133!5.83e-07!59;CL:0000333!7.32e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.82e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.41e-17,253;CL:0002321,6.10e-08,250;CL:0002319,1.62e-07,25;CL:0000333,6.56e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.79e-48!235;DOID:14566!6.03e-47!239;DOID:0050687!4.03e-24!143;DOID:0050686!9.07e-22!137;DOID:305!8.57e-19!106;DOID:2531!8.73e-17!51;DOID:0060083!8.73e-17!51;DOID:1240!9.81e-13!39;DOID:8692!4.77e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.04e-10;51!DOID:0060083;1.04e-10;51!DOID:1240;1.76e-10;39!DOID:8692;3.84e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.36e-47,235;DOID:14566,4.66e-46,239;DOID:0050687,1.44e-23,143;DOID:0050686,8.25e-21,137;DOID:305,2.21e-18,106;DOID:2531,2.80e-17,51;DOID:0060083,2.80e-17,51;DOID:1240,4.26e-13,39;DOID:8692,2.73e-09,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.05e-07;9!UBERON:0001557;9.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.37e-07,9 | |||
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| |||
|short_description=p2@CCNB2 | |||
}} |
Revision as of 07:39, 11 September 2013
Short description: | p2@CCNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CCNB2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 10bp_to_ENST00000559622_5end |
EntrezGene: | CCNB2 |
HGNC: | 1580 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.41e-17 | 253 |
embryonic cell | 6.10e-08 | 250 |
neural cell | 1.62e-07 | 25 |
migratory neural crest cell | 6.56e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.36e-47 | 235 |
disease of cellular proliferation | 4.66e-46 | 239 |
cell type cancer | 1.44e-23 | 143 |
organ system cancer | 8.25e-21 | 137 |
carcinoma | 2.21e-18 | 106 |
hematologic cancer | 2.80e-17 | 51 |
immune system cancer | 2.80e-17 | 51 |
leukemia | 4.26e-13 | 39 |
myeloid leukemia | 2.73e-09 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.