FFCP PHASE1:Hg19::chr16:55516909..55516914,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:55516909..55516914,+|id=chr16:55516909..55516914,+|ontology_enrichment_celltype=CL:0000055!2.25e-23!180;CL:0000057!7.55e-18!75;CL:0000048!1.01e-10!430;CL:0002620!1.31e-10!23;CL:0000723!3.54e-10!436;CL:0002334!1.04e-09!12;CL:0000034!1.75e-09!444;CL:0002371!2.01e-09!591;CL:0000144!9.09e-08!625;CL:0000680!3.10e-07!57;CL:0000056!3.10e-07!57;CL:0000355!3.10e-07!57;CL:0000183!7.34e-07!59|ontology_enrichment_celltype_v019=CL:0000214;1.28e-11;3!CL:0000569;6.20e-09;4!CL:0000723;3.15e-08;61!CL:0000048;6.47e-08;58!CL:0002539;9.69e-08;10!CL:0000134;1.92e-07;55|ontology_enrichment_celltype_v019_2=CL:0000214,1.68e-11,3;CL:0000569,1.00e-08,4;CL:0000011,1.00e-08,4;CL:0002539,6.75e-08,10;CL:0000048,6.25e-07,427;CL:0000723,8.89e-07,433|ontology_enrichment_development_v019=UBERON:0003099;2.44e-09;1!UBERON:0003852;2.44e-09;1!CL:0000011;6.20e-09;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004290!5.10e-08!70;UBERON:0000914!1.14e-07!83;UBERON:0002329!1.14e-07!83;UBERON:0003077!1.14e-07!83;UBERON:0003059!1.14e-07!83;UBERON:0007282!1.14e-07!83;UBERON:0009618!1.14e-07!83;UBERON:0007285!1.14e-07!83;UBERON:0002199!2.85e-07!45;UBERON:0002416!2.85e-07!45;UBERON:0000486!3.43e-07!82|ontology_enrichment_uberon_v019=UBERON:0004457;1.26e-14;9!UBERON:0000042;1.26e-14;9!UBERON:0006915;1.28e-11;3!UBERON:0007616;1.28e-11;3!UBERON:0002217;1.28e-11;3!UBERON:0002018;1.28e-11;3!UBERON:0005705;2.44e-09;1!UBERON:0008193;2.44e-09;1!UBERON:0010912;2.44e-09;1!UBERON:0002514;2.44e-09;1!UBERON:0003457;2.44e-09;1!UBERON:0008907;2.44e-09;1!UBERON:0008001;2.44e-09;1!UBERON:0007213;2.44e-09;1!UBERON:0009891;2.44e-09;1!UBERON:0007914;2.44e-09;1!UBERON:0007375;2.44e-09;1!UBERON:0003323;2.44e-09;1!UBERON:0010258;2.44e-09;1!UBERON:0005253;2.44e-09;1!UBERON:0007842;2.44e-09;1!UBERON:0002397;2.44e-09;1!UBERON:0003113;2.44e-09;1!UBERON:0003277;2.44e-09;1!UBERON:0001709;2.44e-09;1!UBERON:0002244;2.44e-09;1!UBERON:0005620;2.44e-09;1!UBERON:0010364;2.44e-09;1!UBERON:0004288;2.44e-09;1!UBERON:0004237;9.69e-08;10!UBERON:0004695;9.69e-08;10!UBERON:0002111;9.69e-08;10!UBERON:0004178;9.69e-08;10!UBERON:0002118;2.59e-07;5!UBERON:0004458;4.00e-07;48|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.68e-11,3;UBERON:0007616,1.68e-11,3;UBERON:0002217,1.68e-11,3;UBERON:0002018,1.68e-11,3;UBERON:0004457,5.09e-11,12;UBERON:0000042,5.09e-11,12;UBERON:0005705,1.69e-09,1;UBERON:0008193,1.69e-09,1;UBERON:0010912,1.69e-09,1;UBERON:0002514,1.69e-09,1;UBERON:0003457,1.69e-09,1;UBERON:0008907,1.69e-09,1;UBERON:0008001,1.69e-09,1;UBERON:0007213,1.69e-09,1;UBERON:0009891,1.69e-09,1;UBERON:0007914,1.69e-09,1;UBERON:0009292,1.69e-09,1;UBERON:0003099,1.69e-09,1;UBERON:0007375,1.69e-09,1;UBERON:0003323,1.69e-09,1;UBERON:0010258,1.69e-09,1;UBERON:0007842,1.69e-09,1;UBERON:0009494,1.69e-09,1;UBERON:0010042,1.69e-09,1;UBERON:0010045,1.69e-09,1;UBERON:0010259,1.69e-09,1;UBERON:0010359,1.69e-09,1;UBERON:0009526,1.69e-09,1;UBERON:0002397,1.69e-09,1;UBERON:0003113,1.69e-09,1;UBERON:0003277,1.69e-09,1;UBERON:0001709,1.69e-09,1;UBERON:0004066,1.69e-09,1;UBERON:0002244,1.69e-09,1;UBERON:0005620,1.69e-09,1;UBERON:0004362,1.69e-09,1;UBERON:0010364,1.69e-09,1;UBERON:0010046,1.69e-09,1;UBERON:0005868,1.69e-09,1;UBERON:0007238,1.69e-09,1;UBERON:0004288,1.69e-09,1;UBERON:0004068,1.69e-09,1;UBERON:0010334,1.69e-09,1;UBERON:0003852,1.69e-09,1;UBERON:0010253,1.69e-09,1;UBERON:0004237,6.75e-08,10;UBERON:0004695,6.75e-08,10;UBERON:0002111,6.75e-08,10;UBERON:0004178,6.75e-08,10;UBERON:0002118,2.36e-07,5;UBERON:0004458,2.79e-07,49|phase1_expression=0.54503513781167,1.2846031433459,0.422863212287913,0,4.46961094427288,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0.672325146451775,1.20538905604795,0,1.95173119516203,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.506522046658319,0.132409180813219,2.0078563452417,0.709336764396714,0,0,0,1.24484414159907,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0.30648779579902,1.20190447125277,0,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0.644349290496095,0.323292113637624,0.710019185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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:55516909..55516914,+ | |||
|id=chr16:55516909..55516914,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.25e-23!180;CL:0000057!7.55e-18!75;CL:0000048!1.01e-10!430;CL:0002620!1.31e-10!23;CL:0000723!3.54e-10!436;CL:0002334!1.04e-09!12;CL:0000034!1.75e-09!444;CL:0002371!2.01e-09!591;CL:0000144!9.09e-08!625;CL:0000680!3.10e-07!57;CL:0000056!3.10e-07!57;CL:0000355!3.10e-07!57;CL:0000183!7.34e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.28e-11;3!CL:0000569;6.20e-09;4!CL:0000723;3.15e-08;61!CL:0000048;6.47e-08;58!CL:0002539;9.69e-08;10!CL:0000134;1.92e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.68e-11,3;CL:0000569,1.00e-08,4;CL:0000011,1.00e-08,4;CL:0002539,6.75e-08,10;CL:0000048,6.25e-07,427;CL:0000723,8.89e-07,433 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.44e-09;1!UBERON:0003852;2.44e-09;1!CL:0000011;6.20e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.10e-08!70;UBERON:0000914!1.14e-07!83;UBERON:0002329!1.14e-07!83;UBERON:0003077!1.14e-07!83;UBERON:0003059!1.14e-07!83;UBERON:0007282!1.14e-07!83;UBERON:0009618!1.14e-07!83;UBERON:0007285!1.14e-07!83;UBERON:0002199!2.85e-07!45;UBERON:0002416!2.85e-07!45;UBERON:0000486!3.43e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.26e-14;9!UBERON:0000042;1.26e-14;9!UBERON:0006915;1.28e-11;3!UBERON:0007616;1.28e-11;3!UBERON:0002217;1.28e-11;3!UBERON:0002018;1.28e-11;3!UBERON:0005705;2.44e-09;1!UBERON:0008193;2.44e-09;1!UBERON:0010912;2.44e-09;1!UBERON:0002514;2.44e-09;1!UBERON:0003457;2.44e-09;1!UBERON:0008907;2.44e-09;1!UBERON:0008001;2.44e-09;1!UBERON:0007213;2.44e-09;1!UBERON:0009891;2.44e-09;1!UBERON:0007914;2.44e-09;1!UBERON:0007375;2.44e-09;1!UBERON:0003323;2.44e-09;1!UBERON:0010258;2.44e-09;1!UBERON:0005253;2.44e-09;1!UBERON:0007842;2.44e-09;1!UBERON:0002397;2.44e-09;1!UBERON:0003113;2.44e-09;1!UBERON:0003277;2.44e-09;1!UBERON:0001709;2.44e-09;1!UBERON:0002244;2.44e-09;1!UBERON:0005620;2.44e-09;1!UBERON:0010364;2.44e-09;1!UBERON:0004288;2.44e-09;1!UBERON:0004237;9.69e-08;10!UBERON:0004695;9.69e-08;10!UBERON:0002111;9.69e-08;10!UBERON:0004178;9.69e-08;10!UBERON:0002118;2.59e-07;5!UBERON:0004458;4.00e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.68e-11,3;UBERON:0007616,1.68e-11,3;UBERON:0002217,1.68e-11,3;UBERON:0002018,1.68e-11,3;UBERON:0004457,5.09e-11,12;UBERON:0000042,5.09e-11,12;UBERON:0005705,1.69e-09,1;UBERON:0008193,1.69e-09,1;UBERON:0010912,1.69e-09,1;UBERON:0002514,1.69e-09,1;UBERON:0003457,1.69e-09,1;UBERON:0008907,1.69e-09,1;UBERON:0008001,1.69e-09,1;UBERON:0007213,1.69e-09,1;UBERON:0009891,1.69e-09,1;UBERON:0007914,1.69e-09,1;UBERON:0009292,1.69e-09,1;UBERON:0003099,1.69e-09,1;UBERON:0007375,1.69e-09,1;UBERON:0003323,1.69e-09,1;UBERON:0010258,1.69e-09,1;UBERON:0007842,1.69e-09,1;UBERON:0009494,1.69e-09,1;UBERON:0010042,1.69e-09,1;UBERON:0010045,1.69e-09,1;UBERON:0010259,1.69e-09,1;UBERON:0010359,1.69e-09,1;UBERON:0009526,1.69e-09,1;UBERON:0002397,1.69e-09,1;UBERON:0003113,1.69e-09,1;UBERON:0003277,1.69e-09,1;UBERON:0001709,1.69e-09,1;UBERON:0004066,1.69e-09,1;UBERON:0002244,1.69e-09,1;UBERON:0005620,1.69e-09,1;UBERON:0004362,1.69e-09,1;UBERON:0010364,1.69e-09,1;UBERON:0010046,1.69e-09,1;UBERON:0005868,1.69e-09,1;UBERON:0007238,1.69e-09,1;UBERON:0004288,1.69e-09,1;UBERON:0004068,1.69e-09,1;UBERON:0010334,1.69e-09,1;UBERON:0003852,1.69e-09,1;UBERON:0010253,1.69e-09,1;UBERON:0004237,6.75e-08,10;UBERON:0004695,6.75e-08,10;UBERON:0002111,6.75e-08,10;UBERON:0004178,6.75e-08,10;UBERON:0002118,2.36e-07,5;UBERON:0004458,2.79e-07,49 | |||
|phase1_expression=0.54503513781167,1.2846031433459,0.422863212287913,0,4.46961094427288,0,0,0,0.783556884599516,0,0,0,0.263766978228454,0,0,0.672325146451775,1.20538905604795,0,1.95173119516203,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.506522046658319,0.132409180813219,2.0078563452417,0.709336764396714,0,0,0,1.24484414159907,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0.30648779579902,1.20190447125277,0,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0.644349290496095,0.323292113637624,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,2.0694614258501,0.664225598535437,0.553107505625109,0.260650843404249,0.587403472388222,0.343143423810856,0,0,0,0,0,0.604780586659361,1.24053903909388,0.460385919864187,0.841980283299221,0.256278298511402,1.53512174720011,0.64341568457443,0,0.154209693802656,0.355123450626254,0,0.519254429183621,0.232420756919918,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0,0,0,0.464845549297286,0.94443704049192,0,0,0,1.73986598415015,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0,0,0,0.282810863907425,0,0,0,0.876901770507525,0,0.655894752046633,0,0,0,0,0.0982490410131212,0.35667105148125,0,1.05553817648832,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0.276283915531148,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,1.10961172300523,0.378806010550178,1.25783950876288,0,0.686520205190771,1.05861646634267,0.310874401165561,1.18284119991707,0.159296767163702,0,0,1.24411862352257,0.265841714557995,0,0.150257608997218,0.761610424337591,0,1.09109195521536,0.107410557042488,1.85613503951397,0.796191777397232,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,1.8374728641192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.224263725161227,0.12729431655633,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr16:55516909..55516914,+ | |||
}} |
Revision as of 10:44, 11 September 2013
Short description: | p@chr16:55516909..55516914, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:55516909..55516914, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.68e-11 | 3 |
cardiac mesenchymal cell | 1.00e-08 | 4 |
migratory trunk neural crest cell | 1.00e-08 | 4 |
aortic smooth muscle cell | 6.75e-08 | 10 |
multi fate stem cell | 6.25e-07 | 427 |
somatic stem cell | 8.89e-07 | 433 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.