FFCP PHASE1:Hg19::chr16:67197614..67197625,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3299|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5227|TSSclassifier=S|UniProt=|association_with_transcript=3bp_to_ENST00000518227_5end|coexpression_cluster_id=C3582|description=CAGE_peak_10_at_HSF4_5end|id=chr16:67197614..67197625,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;2.41e-14;5!CL:0002535;1.07e-09;2!CL:0000123;1.64e-09;2!CL:0000242;1.64e-09;2|ontology_enrichment_celltype_v019_2=CL:0002535,1.22e-09,2;CL:0000242,1.33e-09,2|ontology_enrichment_development_v019=UBERON:0006215;4.12e-23;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;9.80e-16;10!DOID:3095;1.61e-12;22!DOID:2994;1.61e-12;22!DOID:169;4.07e-12;6!DOID:3307;1.07e-09;2|ontology_enrichment_disease_v019_2=DOID:171,9.10e-16,10;DOID:3095,1.51e-12,22;DOID:2994,1.51e-12,22;DOID:169,3.85e-12,6;DOID:3307,1.03e-09,2|ontology_enrichment_uberon=UBERON:0007023!3.61e-33!115;UBERON:0001049!1.43e-30!57;UBERON:0005068!1.43e-30!57;UBERON:0006241!1.43e-30!57;UBERON:0007135!1.43e-30!57;UBERON:0000073!2.70e-30!94;UBERON:0001016!2.70e-30!94;UBERON:0002616!3.27e-29!59;UBERON:0001017!1.65e-27!82;UBERON:0005743!2.14e-27!86;UBERON:0000955!1.33e-26!69;UBERON:0006238!1.33e-26!69;UBERON:0002346!3.48e-26!90;UBERON:0003075!1.75e-24!86;UBERON:0007284!1.75e-24!86;UBERON:0000924!5.01e-23!173;UBERON:0006601!5.01e-23!173;UBERON:0002780!5.54e-22!41;UBERON:0001890!5.54e-22!41;UBERON:0006240!5.54e-22!41;UBERON:0004121!1.61e-21!169;UBERON:0003080!2.62e-21!42;UBERON:0001893!3.70e-18!34;UBERON:0002020!4.68e-18!34;UBERON:0003528!4.68e-18!34;UBERON:0000033!5.81e-18!123;UBERON:0001869!1.37e-17!32;UBERON:0002791!7.71e-17!33;UBERON:0002619!7.75e-17!22;UBERON:0000153!1.32e-16!129;UBERON:0007811!1.32e-16!129;UBERON:0001950!3.21e-16!20;UBERON:0003056!1.70e-15!61;UBERON:0000956!1.98e-14!25;UBERON:0000203!1.98e-14!25;UBERON:0004733!1.29e-10!12;UBERON:0002028!1.29e-10!12;UBERON:0007277!1.29e-10!12;UBERON:0003076!1.98e-10!15;UBERON:0003057!1.98e-10!15;UBERON:0004732!1.13e-09!13;UBERON:0000200!6.94e-09!6;UBERON:0002298!8.53e-09!8;UBERON:0002771!2.61e-07!3;UBERON:0001896!3.23e-07!3;UBERON:0005290!3.23e-07!3;UBERON:0010096!3.23e-07!3;UBERON:0001872!5.34e-07!5|ontology_enrichment_uberon_v019=UBERON:0000013;2.41e-14;5!UBERON:0002410;2.41e-14;5!UBERON:0002037;4.55e-12;6!UBERON:0006955;1.07e-09;2!UBERON:0004801;1.07e-09;2!UBERON:0001905;1.64e-09;2!UBERON:0002757;1.64e-09;2!UBERON:0010134;1.64e-09;2!UBERON:0005408;1.64e-09;2!UBERON:0001899;1.64e-09;2!UBERON:0000010;2.20e-08;8!UBERON:0002680;2.37e-08;9!UBERON:0001895;2.37e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.25e-14,5;UBERON:0002410,2.25e-14,5;UBERON:0002037,5.08e-12,6;UBERON:0006215,5.08e-12,6;UBERON:0001016,6.53e-11,89;UBERON:0006955,1.22e-09,2;UBERON:0004801,1.22e-09,2;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0004121,1.10e-08,171;UBERON:0000924,1.10e-08,171;UBERON:0006601,1.10e-08,171;UBERON:0000010,2.13e-08,8;UBERON:0002680,2.55e-08,9;UBERON:0001895,2.55e-08,9;UBERON:0010092,2.55e-08,9;UBERON:0000073,1.21e-07,53;UBERON:0002616,1.21e-07,53;UBERON:0001049,3.06e-07,56;UBERON:0005068,3.06e-07,56;UBERON:0006241,3.06e-07,56;UBERON:0007135,3.06e-07,56;UBERON:0001017,6.45e-07,81|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,2.01546198283421,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,3.05163472634166,1.10579259931225,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5227 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENST00000518227_5end | |||
|coexpression_cluster_id=C3582 | |||
|description=CAGE_peak_10_at_HSF4_5end | |||
|id=chr16:67197614..67197625,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.41e-14;5!CL:0002535;1.07e-09;2!CL:0000123;1.64e-09;2!CL:0000242;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.22e-09,2;CL:0000242,1.33e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.12e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;9.80e-16;10!DOID:3095;1.61e-12;22!DOID:2994;1.61e-12;22!DOID:169;4.07e-12;6!DOID:3307;1.07e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.10e-16,10;DOID:3095,1.51e-12,22;DOID:2994,1.51e-12,22;DOID:169,3.85e-12,6;DOID:3307,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-33!115;UBERON:0001049!1.43e-30!57;UBERON:0005068!1.43e-30!57;UBERON:0006241!1.43e-30!57;UBERON:0007135!1.43e-30!57;UBERON:0000073!2.70e-30!94;UBERON:0001016!2.70e-30!94;UBERON:0002616!3.27e-29!59;UBERON:0001017!1.65e-27!82;UBERON:0005743!2.14e-27!86;UBERON:0000955!1.33e-26!69;UBERON:0006238!1.33e-26!69;UBERON:0002346!3.48e-26!90;UBERON:0003075!1.75e-24!86;UBERON:0007284!1.75e-24!86;UBERON:0000924!5.01e-23!173;UBERON:0006601!5.01e-23!173;UBERON:0002780!5.54e-22!41;UBERON:0001890!5.54e-22!41;UBERON:0006240!5.54e-22!41;UBERON:0004121!1.61e-21!169;UBERON:0003080!2.62e-21!42;UBERON:0001893!3.70e-18!34;UBERON:0002020!4.68e-18!34;UBERON:0003528!4.68e-18!34;UBERON:0000033!5.81e-18!123;UBERON:0001869!1.37e-17!32;UBERON:0002791!7.71e-17!33;UBERON:0002619!7.75e-17!22;UBERON:0000153!1.32e-16!129;UBERON:0007811!1.32e-16!129;UBERON:0001950!3.21e-16!20;UBERON:0003056!1.70e-15!61;UBERON:0000956!1.98e-14!25;UBERON:0000203!1.98e-14!25;UBERON:0004733!1.29e-10!12;UBERON:0002028!1.29e-10!12;UBERON:0007277!1.29e-10!12;UBERON:0003076!1.98e-10!15;UBERON:0003057!1.98e-10!15;UBERON:0004732!1.13e-09!13;UBERON:0000200!6.94e-09!6;UBERON:0002298!8.53e-09!8;UBERON:0002771!2.61e-07!3;UBERON:0001896!3.23e-07!3;UBERON:0005290!3.23e-07!3;UBERON:0010096!3.23e-07!3;UBERON:0001872!5.34e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.41e-14;5!UBERON:0002410;2.41e-14;5!UBERON:0002037;4.55e-12;6!UBERON:0006955;1.07e-09;2!UBERON:0004801;1.07e-09;2!UBERON:0001905;1.64e-09;2!UBERON:0002757;1.64e-09;2!UBERON:0010134;1.64e-09;2!UBERON:0005408;1.64e-09;2!UBERON:0001899;1.64e-09;2!UBERON:0000010;2.20e-08;8!UBERON:0002680;2.37e-08;9!UBERON:0001895;2.37e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.25e-14,5;UBERON:0002410,2.25e-14,5;UBERON:0002037,5.08e-12,6;UBERON:0006215,5.08e-12,6;UBERON:0001016,6.53e-11,89;UBERON:0006955,1.22e-09,2;UBERON:0004801,1.22e-09,2;UBERON:0001905,2.02e-09,2;UBERON:0002757,2.02e-09,2;UBERON:0010134,2.02e-09,2;UBERON:0005408,2.02e-09,2;UBERON:0001899,2.02e-09,2;UBERON:0004121,1.10e-08,171;UBERON:0000924,1.10e-08,171;UBERON:0006601,1.10e-08,171;UBERON:0000010,2.13e-08,8;UBERON:0002680,2.55e-08,9;UBERON:0001895,2.55e-08,9;UBERON:0010092,2.55e-08,9;UBERON:0000073,1.21e-07,53;UBERON:0002616,1.21e-07,53;UBERON:0001049,3.06e-07,56;UBERON:0005068,3.06e-07,56;UBERON:0006241,3.06e-07,56;UBERON:0007135,3.06e-07,56;UBERON:0001017,6.45e-07,81 | |||
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|short_description=p10@HSF4 | |||
}} |
Revision as of 11:08, 11 September 2013
Short description: | p10@HSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_HSF4_5end |
Coexpression cluster: | C3582_neuroblastoma_neuroectodermal_cerebellum_merkel_argyrophil_duodenum_pineal |
Association with transcript: | 3bp_to_ENST00000518227_5end |
EntrezGene: | HSF4 |
HGNC: | 5227 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.22e-09 | 2 |
Merkel cell | 1.33e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.25e-14 | 5 |
autonomic nervous system | 2.25e-14 | 5 |
cerebellum | 5.08e-12 | 6 |
rhombic lip | 5.08e-12 | 6 |
nervous system | 6.53e-11 | 89 |
uterine epithelium | 1.22e-09 | 2 |
cervix epithelium | 1.22e-09 | 2 |
pineal body | 2.02e-09 | 2 |
regional part of epithalamus | 2.02e-09 | 2 |
secretory circumventricular organ | 2.02e-09 | 2 |
circumventricular organ | 2.02e-09 | 2 |
epithalamus | 2.02e-09 | 2 |
ectoderm-derived structure | 1.10e-08 | 171 |
ectoderm | 1.10e-08 | 171 |
presumptive ectoderm | 1.10e-08 | 171 |
peripheral nervous system | 2.13e-08 | 8 |
regional part of metencephalon | 2.55e-08 | 9 |
metencephalon | 2.55e-08 | 9 |
future metencephalon | 2.55e-08 | 9 |
regional part of nervous system | 1.21e-07 | 53 |
regional part of brain | 1.21e-07 | 53 |
neural tube | 3.06e-07 | 56 |
neural rod | 3.06e-07 | 56 |
future spinal cord | 3.06e-07 | 56 |
neural keel | 3.06e-07 | 56 |
central nervous system | 6.45e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.10e-16 | 10 |
germ cell and embryonal cancer | 1.51e-12 | 22 |
germ cell cancer | 1.51e-12 | 22 |
neuroendocrine tumor | 3.85e-12 | 6 |
teratoma | 1.03e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.