FFCP PHASE1:Hg19::chr16:68679173..68679184,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1001|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1762|TSSclassifier=S|UniProt=F5GZX7|association_with_transcript=-19bp_to_ENST00000542274_5end|coexpression_cluster_id=C226|description=CAGE_peak_2_at_CDH3_5end|id=chr16:68679173..68679184,+|ontology_enrichment_celltype=CL:0000066!4.19e-52!254;CL:0002076!2.45e-24!43;CL:0000223!2.50e-17!59;CL:0002077!2.17e-14!33;CL:0002368!4.28e-12!13;CL:0002251!5.47e-12!21;CL:0002159!3.93e-11!13;CL:0000076!2.29e-09!62;CL:0002202!4.22e-08!9;CL:0002632!4.22e-08!9;CL:0000147!5.33e-08!14;CL:0000150!5.57e-08!9;CL:0000148!1.33e-07!10;CL:0000541!1.33e-07!10;CL:0000075!3.10e-07!27;CL:1000507!3.49e-07!12;CL:1000494!3.49e-07!12;CL:0002321!8.73e-07!248;CL:0000039!9.99e-07!7;CL:0000586!9.99e-07!7|ontology_enrichment_celltype_v019=CL:0002076;2.18e-28;42!CL:0002251;2.16e-18;20!CL:0002368;7.24e-17;13!CL:0002159;2.59e-12;14!CL:0002077;2.58e-11;34!CL:0002202;3.75e-11;9!CL:0002632;3.75e-11;9!CL:0000039;6.81e-09;7!CL:0000586;6.81e-09;7!CL:1000507;1.25e-08;10!CL:1000494;1.25e-08;10!CL:0000244;4.89e-08;4!CL:0000731;4.89e-08;4!CL:0000622;1.02e-07;5!CL:0000082;1.39e-07;19!CL:0000150;2.23e-07;9!CL:0002322;7.29e-07;5!CL:1000449;8.28e-07;15!CL:0002327;9.03e-07;4!CL:0000240;9.54e-07;6!CL:0000311;9.54e-07;6!CL:0000079;9.54e-07;6!CL:0000237;9.54e-07;6|ontology_enrichment_celltype_v019_2=CL:0000066,3.80e-56,253;CL:0002076,5.74e-37,42;CL:0000223,1.15e-26,58;CL:0002251,2.18e-18,20;CL:0002368,7.60e-17,13;CL:0002077,6.78e-13,34;CL:0002159,2.17e-12,14;CL:0002202,3.86e-11,9;CL:0002632,3.86e-11,9;CL:0002321,7.54e-11,250;CL:0000076,1.17e-10,63;CL:0000039,6.13e-09,7;CL:0000586,6.13e-09,7;CL:1000507,1.32e-08,10;CL:1000494,1.32e-08,10;CL:0000244,4.94e-08,4;CL:0000731,4.94e-08,4;CL:0000622,1.06e-07,5;CL:0000082,1.34e-07,19;CL:0000150,2.39e-07,9;CL:1000449,8.56e-07,15;CL:0002322,8.77e-07,5;CL:0000240,8.82e-07,6;CL:0000311,8.82e-07,6;CL:0000079,8.82e-07,6;CL:0000237,8.82e-07,6;CL:0000036,8.82e-07,6;CL:0000357,8.82e-07,6;CL:0000114,8.82e-07,6;CL:0002327,9.12e-07,4|ontology_enrichment_development_v019=CL:0000223;1.27e-13;58!CL:0000357;9.54e-07;6!CL:0000114;9.54e-07;6|ontology_enrichment_disease=DOID:305!2.19e-19!106;DOID:0050687!1.30e-14!143;DOID:1749!2.32e-12!14;DOID:299!9.45e-08!25|ontology_enrichment_disease_v019=DOID:1749;3.61e-17;14!DOID:299;3.69e-09;25|ontology_enrichment_disease_v019_2=DOID:305,3.65e-20,106;DOID:1749,3.23e-17,14;DOID:0050687,4.32e-14,143;DOID:299,3.38e-09,25|ontology_enrichment_uberon=UBERON:0004119!1.43e-15!169;UBERON:0000925!1.43e-15!169;UBERON:0006595!1.43e-15!169;UBERON:0000464!1.01e-14!104;UBERON:0001004!5.03e-13!72;UBERON:0006554!3.08e-12!44;UBERON:0000466!3.93e-12!126;UBERON:0005153!4.43e-12!37;UBERON:0001008!9.44e-12!45;UBERON:0005911!1.59e-11!82;UBERON:0005157!6.50e-11!51;UBERON:0000065!1.85e-10!53;UBERON:0000077!2.91e-10!130;UBERON:0003064!5.02e-10!37;UBERON:0001007!8.03e-10!155;UBERON:0001555!8.03e-10!155;UBERON:0007026!8.03e-10!155;UBERON:0005177!2.92e-09!107;UBERON:0005178!4.85e-09!34;UBERON:0002224!4.85e-09!34;UBERON:0005156!1.23e-08!59;UBERON:0000990!1.23e-08!59;UBERON:0005181!1.38e-08!35;UBERON:0000161!2.47e-08!35;UBERON:0009569!2.90e-08!113;UBERON:0003101!3.21e-08!22;UBERON:0000079!3.21e-08!22;UBERON:0000058!6.18e-08!26;UBERON:0000064!7.56e-08!219;UBERON:0004921!9.45e-08!129;UBERON:0004185!9.45e-08!129;UBERON:0000344!1.37e-07!12;UBERON:0002553!2.28e-07!70;UBERON:0009773!3.49e-07!12;UBERON:0001231!3.49e-07!12;UBERON:0004810!3.49e-07!12;UBERON:0002048!5.87e-07!22;UBERON:0000117!5.87e-07!22;UBERON:0000171!5.87e-07!22;UBERON:0000170!5.87e-07!22;UBERON:0005597!5.87e-07!22;UBERON:0000118!5.87e-07!22;UBERON:0004807!6.57e-07!28;UBERON:0000072!7.12e-07!46;UBERON:0005910!7.24e-07!6;UBERON:0008947!7.40e-07!38;UBERON:0003258!7.40e-07!38;UBERON:0003887!7.64e-07!21;UBERON:0000080!8.35e-07!18;UBERON:0002120!8.35e-07!18;UBERON:0004875!8.35e-07!18;UBERON:0005721!8.35e-07!18;UBERON:0005754!8.35e-07!18;UBERON:0007297!8.35e-07!18|ontology_enrichment_uberon_v019=UBERON:0005911;2.06e-11;36!UBERON:0004807;1.36e-10;22!UBERON:0000344;9.13e-10;20!UBERON:0000365;9.10e-09;5!UBERON:0004211;1.25e-08;10!UBERON:0009773;1.25e-08;10!UBERON:0001231;1.25e-08;10!UBERON:0004810;1.25e-08;10!UBERON:0005178;2.69e-08;34!UBERON:0002224;2.69e-08;34!UBERON:0006554;3.86e-08;30!UBERON:0001008;3.86e-08;30!UBERON:0000486;9.94e-08;12!UBERON:0004802;1.39e-07;19!UBERON:0000115;1.39e-07;19!UBERON:0005181;2.04e-07;35!UBERON:0000161;2.70e-07;19!UBERON:0000166;2.70e-07;19!UBERON:0007196;3.03e-07;15!UBERON:0001558;3.03e-07;15!UBERON:0005910;3.49e-07;6!UBERON:0003343;8.19e-07;4!UBERON:0004785;8.19e-07;4!UBERON:0006555;8.28e-07;15!UBERON:0004819;8.28e-07;15!UBERON:0001285;8.28e-07;15!UBERON:0007684;8.28e-07;15!UBERON:0003729;8.78e-07;13!UBERON:0001851;8.85e-07;15!UBERON:0001911;9.03e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.69e-15,160;UBERON:0000925,4.69e-15,160;UBERON:0006595,4.69e-15,160;UBERON:0001004,6.43e-13,74;UBERON:0005153,1.49e-11,37;UBERON:00051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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |||
|TSSclassifier=S | |||
|UniProt=F5GZX7 | |||
|association_with_transcript=-19bp_to_ENST00000542274_5end | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_2_at_CDH3_5end | |||
|id=chr16:68679173..68679184,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.19e-52!254;CL:0002076!2.45e-24!43;CL:0000223!2.50e-17!59;CL:0002077!2.17e-14!33;CL:0002368!4.28e-12!13;CL:0002251!5.47e-12!21;CL:0002159!3.93e-11!13;CL:0000076!2.29e-09!62;CL:0002202!4.22e-08!9;CL:0002632!4.22e-08!9;CL:0000147!5.33e-08!14;CL:0000150!5.57e-08!9;CL:0000148!1.33e-07!10;CL:0000541!1.33e-07!10;CL:0000075!3.10e-07!27;CL:1000507!3.49e-07!12;CL:1000494!3.49e-07!12;CL:0002321!8.73e-07!248;CL:0000039!9.99e-07!7;CL:0000586!9.99e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.18e-28;42!CL:0002251;2.16e-18;20!CL:0002368;7.24e-17;13!CL:0002159;2.59e-12;14!CL:0002077;2.58e-11;34!CL:0002202;3.75e-11;9!CL:0002632;3.75e-11;9!CL:0000039;6.81e-09;7!CL:0000586;6.81e-09;7!CL:1000507;1.25e-08;10!CL:1000494;1.25e-08;10!CL:0000244;4.89e-08;4!CL:0000731;4.89e-08;4!CL:0000622;1.02e-07;5!CL:0000082;1.39e-07;19!CL:0000150;2.23e-07;9!CL:0002322;7.29e-07;5!CL:1000449;8.28e-07;15!CL:0002327;9.03e-07;4!CL:0000240;9.54e-07;6!CL:0000311;9.54e-07;6!CL:0000079;9.54e-07;6!CL:0000237;9.54e-07;6 | |||
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|ontology_enrichment_development_v019=CL:0000223;1.27e-13;58!CL:0000357;9.54e-07;6!CL:0000114;9.54e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.19e-19!106;DOID:0050687!1.30e-14!143;DOID:1749!2.32e-12!14;DOID:299!9.45e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.61e-17;14!DOID:299;3.69e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.65e-20,106;DOID:1749,3.23e-17,14;DOID:0050687,4.32e-14,143;DOID:299,3.38e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.43e-15!169;UBERON:0000925!1.43e-15!169;UBERON:0006595!1.43e-15!169;UBERON:0000464!1.01e-14!104;UBERON:0001004!5.03e-13!72;UBERON:0006554!3.08e-12!44;UBERON:0000466!3.93e-12!126;UBERON:0005153!4.43e-12!37;UBERON:0001008!9.44e-12!45;UBERON:0005911!1.59e-11!82;UBERON:0005157!6.50e-11!51;UBERON:0000065!1.85e-10!53;UBERON:0000077!2.91e-10!130;UBERON:0003064!5.02e-10!37;UBERON:0001007!8.03e-10!155;UBERON:0001555!8.03e-10!155;UBERON:0007026!8.03e-10!155;UBERON:0005177!2.92e-09!107;UBERON:0005178!4.85e-09!34;UBERON:0002224!4.85e-09!34;UBERON:0005156!1.23e-08!59;UBERON:0000990!1.23e-08!59;UBERON:0005181!1.38e-08!35;UBERON:0000161!2.47e-08!35;UBERON:0009569!2.90e-08!113;UBERON:0003101!3.21e-08!22;UBERON:0000079!3.21e-08!22;UBERON:0000058!6.18e-08!26;UBERON:0000064!7.56e-08!219;UBERON:0004921!9.45e-08!129;UBERON:0004185!9.45e-08!129;UBERON:0000344!1.37e-07!12;UBERON:0002553!2.28e-07!70;UBERON:0009773!3.49e-07!12;UBERON:0001231!3.49e-07!12;UBERON:0004810!3.49e-07!12;UBERON:0002048!5.87e-07!22;UBERON:0000117!5.87e-07!22;UBERON:0000171!5.87e-07!22;UBERON:0000170!5.87e-07!22;UBERON:0005597!5.87e-07!22;UBERON:0000118!5.87e-07!22;UBERON:0004807!6.57e-07!28;UBERON:0000072!7.12e-07!46;UBERON:0005910!7.24e-07!6;UBERON:0008947!7.40e-07!38;UBERON:0003258!7.40e-07!38;UBERON:0003887!7.64e-07!21;UBERON:0000080!8.35e-07!18;UBERON:0002120!8.35e-07!18;UBERON:0004875!8.35e-07!18;UBERON:0005721!8.35e-07!18;UBERON:0005754!8.35e-07!18;UBERON:0007297!8.35e-07!18 | |||
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| |||
|short_description=p2@CDH3 | |||
}} |
Revision as of 11:17, 11 September 2013
Short description: | p2@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CDH3_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | -19bp_to_ENST00000542274_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | F5GZX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.65e-20 | 106 |
squamous cell carcinoma | 3.23e-17 | 14 |
cell type cancer | 4.32e-14 | 143 |
adenocarcinoma | 3.38e-09 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.