FFCP PHASE1:Hg19::chr16:73093108..73093119,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000558842_5end|description=CAGE_peak_4_at_ENST00000558842_5end|id=chr16:73093108..73093119,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002536;2.68e-14;2!CL:0002553;5.39e-08;1|ontology_enrichment_celltype_v019_2=CL:0002536,2.53e-14,2;CL:0002553,2.71e-08,1|ontology_enrichment_development_v019=UBERON:0006242;2.11e-08;1!UBERON:0005754;5.39e-08;1!UBERON:0010115;5.39e-08;1!UBERON:0004874;5.39e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.71e-08;1!DOID:4549;1.71e-08;1!DOID:5861;1.71e-08;1!DOID:6496;1.71e-08;1|ontology_enrichment_disease_v019_2=DOID:3371,1.77e-08,1;DOID:4549,1.77e-08,1;DOID:5861,1.77e-08,1;DOID:6496,1.77e-08,1|ontology_enrichment_uberon=UBERON:0007023!6.31e-11!115;UBERON:0000468!1.92e-08!659;UBERON:0000477!8.18e-08!286;UBERON:0000481!1.02e-07!347;UBERON:0000467!5.54e-07!625;UBERON:0000480!6.91e-07!626|ontology_enrichment_uberon_v019=UBERON:0006947;3.98e-10;3!UBERON:0004054;3.98e-10;3!UBERON:0001000;1.90e-08;1!UBERON:0005352;1.90e-08;1!UBERON:0002363;5.39e-08;1!UBERON:0000989;5.39e-08;1!UBERON:0000998;5.39e-08;1!UBERON:0002134;5.39e-08;1!UBERON:0008811;5.39e-08;1!UBERON:0006868;5.39e-08;1!UBERON:0005208;5.39e-08;1!UBERON:0004145;5.39e-08;1!UBERON:0005946;5.39e-08;1!UBERON:0005965;5.39e-08;1!UBERON:0002078;5.39e-08;1!UBERON:0005904;8.40e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.18e-10,3;UBERON:0004054,4.18e-10,3;UBERON:0001000,1.91e-08,1;UBERON:0005352,1.91e-08,1;UBERON:0002363,2.35e-08,1;UBERON:0007645,2.35e-08,1;UBERON:0007647,2.35e-08,1;UBERON:0010115,2.35e-08,1;UBERON:0000989,3.58e-08,1;UBERON:0008811,3.58e-08,1;UBERON:0006258,3.58e-08,1;UBERON:0005876,3.58e-08,1;UBERON:0004874,3.58e-08,1;UBERON:0002134,4.11e-08,1;UBERON:0005208,4.11e-08,1;UBERON:0005946,4.11e-08,1;UBERON:0005965,4.11e-08,1;UBERON:0002078,4.11e-08,1;UBERON:0000998,5.79e-08,1;UBERON:0006868,5.79e-08,1;UBERON:0005904,8.71e-08,4|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,1.09220686065086,1.58260186937072,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0.269421344139376,0,0.454072282934794,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482022059766964,0.110293972732394,0.435758888184812,0,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0.234282829985426,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0.783204629850962,1.37257369524342,0,0,0,0.606255142892519,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.460404944679482,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.915694648183434,0.577566499444116,0,0,0,0.290012154876366,0.308097234229289,0.307007349452259,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0,0.576570202095319,0,0.10115778085555,0,0.31481234683064,0,0.924100740528266,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0.632758849437452,0,0,0,0,1.56989728039846,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0,0,1.12678241012897,0,0.196498082026242,0,0,0.422215270595328,0.329294892959902,0.75894634753143,1.04980416073495,0.192444225451024,0,1.08890984861323,0.753150406214233,0.43050537267123,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000558842_5end | |||
|description=CAGE_peak_4_at_ENST00000558842_5end | |||
|id=chr16:73093108..73093119,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002536;2.68e-14;2!CL:0002553;5.39e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,2.53e-14,2;CL:0002553,2.71e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.11e-08;1!UBERON:0005754;5.39e-08;1!UBERON:0010115;5.39e-08;1!UBERON:0004874;5.39e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.71e-08;1!DOID:4549;1.71e-08;1!DOID:5861;1.71e-08;1!DOID:6496;1.71e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.77e-08,1;DOID:4549,1.77e-08,1;DOID:5861,1.77e-08,1;DOID:6496,1.77e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.31e-11!115;UBERON:0000468!1.92e-08!659;UBERON:0000477!8.18e-08!286;UBERON:0000481!1.02e-07!347;UBERON:0000467!5.54e-07!625;UBERON:0000480!6.91e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.98e-10;3!UBERON:0004054;3.98e-10;3!UBERON:0001000;1.90e-08;1!UBERON:0005352;1.90e-08;1!UBERON:0002363;5.39e-08;1!UBERON:0000989;5.39e-08;1!UBERON:0000998;5.39e-08;1!UBERON:0002134;5.39e-08;1!UBERON:0008811;5.39e-08;1!UBERON:0006868;5.39e-08;1!UBERON:0005208;5.39e-08;1!UBERON:0004145;5.39e-08;1!UBERON:0005946;5.39e-08;1!UBERON:0005965;5.39e-08;1!UBERON:0002078;5.39e-08;1!UBERON:0005904;8.40e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.18e-10,3;UBERON:0004054,4.18e-10,3;UBERON:0001000,1.91e-08,1;UBERON:0005352,1.91e-08,1;UBERON:0002363,2.35e-08,1;UBERON:0007645,2.35e-08,1;UBERON:0007647,2.35e-08,1;UBERON:0010115,2.35e-08,1;UBERON:0000989,3.58e-08,1;UBERON:0008811,3.58e-08,1;UBERON:0006258,3.58e-08,1;UBERON:0005876,3.58e-08,1;UBERON:0004874,3.58e-08,1;UBERON:0002134,4.11e-08,1;UBERON:0005208,4.11e-08,1;UBERON:0005946,4.11e-08,1;UBERON:0005965,4.11e-08,1;UBERON:0002078,4.11e-08,1;UBERON:0000998,5.79e-08,1;UBERON:0006868,5.79e-08,1;UBERON:0005904,8.71e-08,4 | |||
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| |||
|short_description=p4@ENST00000558842 | |||
}} |
Revision as of 11:29, 11 September 2013
Short description: | p4@ENST00000558842 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENST00000558842_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000558842_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 2.53e-14 | 2 |
lung fibroblast | 2.71e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.18e-10 | 3 |
internal male genitalia | 4.18e-10 | 3 |
vas deferens | 1.91e-08 | 1 |
spermatic cord | 1.91e-08 | 1 |
dura mater | 2.35e-08 | 1 |
future meninx | 2.35e-08 | 1 |
ectomeninx | 2.35e-08 | 1 |
future dura mater | 2.35e-08 | 1 |
penis | 3.58e-08 | 1 |
intromittent organ | 3.58e-08 | 1 |
lateral plate mesenchyme | 3.58e-08 | 1 |
undifferentiated genital tubercle | 3.58e-08 | 1 |
somatopleure | 3.58e-08 | 1 |
tricuspid valve | 4.11e-08 | 1 |
right atrium valve | 4.11e-08 | 1 |
outflow tract of atrium | 4.11e-08 | 1 |
outflow part of right atrium | 4.11e-08 | 1 |
right cardiac atrium | 4.11e-08 | 1 |
seminal vesicle | 5.79e-08 | 1 |
seminal fluid secreting gland | 5.79e-08 | 1 |
duct of male reproductive system | 8.71e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.77e-08 | 1 |
extraosseous chondrosarcoma | 1.77e-08 | 1 |
myxoid chondrosarcoma | 1.77e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.77e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.