FFCP PHASE1:Hg19::chr17:26697257..26697268,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=645832,7448|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=32942,12724|TSSclassifier=S|UniProt=C9JDG5,D9ZGG2,P04004|association_with_transcript=104bp_to_ENST00000536498,NM_000638,uc002hbc.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_SEBOX_5end,CAGE_peak_3_at_VTN_5end|id=chr17:26697257..26697268,-|ontology_enrichment_celltype=CL:0000077!1.48e-12!19;CL:0000181!1.58e-08!12;CL:0000417!1.58e-08!12;CL:0000668!1.58e-08!12;CL:0000414!1.58e-08!12;CL:0000412!1.58e-08!12;CL:0000182!1.58e-08!12|ontology_enrichment_celltype_v019=CL:0000182;7.05e-21;12!CL:0002563;8.93e-10;4!CL:0000077;3.00e-09;19|ontology_enrichment_celltype_v019_2=CL:0000182,7.06e-21,12;CL:0002563,8.94e-10,4;CL:0000077,2.68e-09,19;CL:0000223,1.45e-07,58|ontology_enrichment_development_v019=UBERON:0004161;9.97e-23;11!UBERON:0009497;5.18e-19;13!UBERON:0003104;1.70e-15;31!UBERON:0001041;2.03e-07;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!9.08e-11!19;UBERON:0006925!9.08e-11!19;UBERON:0008836!9.08e-11!19;UBERON:0001737!2.16e-10!9;UBERON:0008835!3.68e-10!22;UBERON:0003894!3.68e-10!22;UBERON:0009497!4.48e-10!25;UBERON:0000015!4.48e-10!25;UBERON:0002423!4.48e-10!25;UBERON:0006235!4.48e-10!25;UBERON:0004161!4.48e-10!25;UBERON:0005172!7.94e-10!55;UBERON:0005173!7.94e-10!55;UBERON:0004921!8.87e-10!129;UBERON:0004185!8.87e-10!129;UBERON:0002417!9.08e-10!61;UBERON:0000916!9.08e-10!61;UBERON:0009854!1.50e-09!23;UBERON:0005057!2.26e-09!26;UBERON:0007499!1.74e-08!25;UBERON:0009856!5.12e-08!26;UBERON:0003929!6.16e-08!54;UBERON:0001007!6.73e-07!155;UBERON:0001555!6.73e-07!155;UBERON:0007026!6.73e-07!155;UBERON:0001048!7.23e-07!168;UBERON:0000077!8.16e-07!130|ontology_enrichment_uberon_v019=UBERON:0002107;6.84e-24;19!UBERON:0006925;6.84e-24;19!UBERON:0002423;5.33e-21;25!UBERON:0002368;1.78e-13;33!UBERON:0002365;3.22e-13;31!UBERON:0002330;3.22e-13;31!UBERON:0001242;8.93e-10;4!UBERON:0001262;8.93e-10;4!UBERON:0004786;8.93e-10;4!UBERON:0004808;8.93e-10;4!UBERON:0001277;8.93e-10;4!UBERON:0005172;1.50e-09;52!UBERON:0005173;1.50e-09;52!UBERON:0000949;8.38e-08;43!UBERON:0002417;1.43e-07;58!UBERON:0000916;1.43e-07;58!UBERON:0002530;2.19e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.56e-24,19;UBERON:0006925,6.56e-24,19;UBERON:0008836,6.56e-24,19;UBERON:0009497,5.20e-21,25;UBERON:0000015,5.20e-21,25;UBERON:0002423,5.20e-21,25;UBERON:0006235,5.20e-21,25;UBERON:0004161,5.20e-21,25;UBERON:0008835,2.59e-20,22;UBERON:0003894,2.59e-20,22;UBERON:0009854,2.53e-19,23;UBERON:0003929,1.36e-17,54;UBERON:0007499,1.40e-17,25;UBERON:0009856,8.23e-17,26;UBERON:0005172,4.20e-15,54;UBERON:0005173,4.20e-15,54;UBERON:0002368,3.50e-14,35;UBERON:0002365,1.04e-13,31;UBERON:0002330,1.04e-13,31;UBERON:0002417,3.29e-13,60;UBERON:0000916,3.29e-13,60;UBERON:0005911,1.36e-11,82;UBERON:0000949,1.95e-10,45;UBERON:0002530,3.13e-10,59;UBERON:0001242,8.94e-10,4;UBERON:0001262,8.94e-10,4;UBERON:0004786,8.94e-10,4;UBERON:0004808,8.94e-10,4;UBERON:0001277,8.94e-10,4;UBERON:0004921,1.64e-07,118;UBERON:0003104,1.94e-07,160;UBERON:0009142,1.94e-07,160;UBERON:0005177,2.27e-07,101|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0.579386075843295,0,0,0,0,0,0.785874452986276,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0.709336764396714,3.36406560085384,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58633690910099,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.964044119533928,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,778.275913806041,487.482299472103,305.438381754286,0,45.6287106994951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,9.22456729165453,0,0,0,0,9.34462068884717,0.871533458600294,9.19751518874925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,11.6025071607957,0,0,2.64073230778596,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,165.277782682947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,1.14378116354295,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.70702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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=645832,7448 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32942,12724 | |||
|TSSclassifier=S | |||
|UniProt=C9JDG5,D9ZGG2,P04004 | |||
|association_with_transcript=104bp_to_ENST00000536498,NM_000638,uc002hbc.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_SEBOX_5end,CAGE_peak_3_at_VTN_5end | |||
|id=chr17:26697257..26697268,- | |||
|ontology_enrichment_celltype=CL:0000077!1.48e-12!19;CL:0000181!1.58e-08!12;CL:0000417!1.58e-08!12;CL:0000668!1.58e-08!12;CL:0000414!1.58e-08!12;CL:0000412!1.58e-08!12;CL:0000182!1.58e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.05e-21;12!CL:0002563;8.93e-10;4!CL:0000077;3.00e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.06e-21,12;CL:0002563,8.94e-10,4;CL:0000077,2.68e-09,19;CL:0000223,1.45e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.97e-23;11!UBERON:0009497;5.18e-19;13!UBERON:0003104;1.70e-15;31!UBERON:0001041;2.03e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.08e-11!19;UBERON:0006925!9.08e-11!19;UBERON:0008836!9.08e-11!19;UBERON:0001737!2.16e-10!9;UBERON:0008835!3.68e-10!22;UBERON:0003894!3.68e-10!22;UBERON:0009497!4.48e-10!25;UBERON:0000015!4.48e-10!25;UBERON:0002423!4.48e-10!25;UBERON:0006235!4.48e-10!25;UBERON:0004161!4.48e-10!25;UBERON:0005172!7.94e-10!55;UBERON:0005173!7.94e-10!55;UBERON:0004921!8.87e-10!129;UBERON:0004185!8.87e-10!129;UBERON:0002417!9.08e-10!61;UBERON:0000916!9.08e-10!61;UBERON:0009854!1.50e-09!23;UBERON:0005057!2.26e-09!26;UBERON:0007499!1.74e-08!25;UBERON:0009856!5.12e-08!26;UBERON:0003929!6.16e-08!54;UBERON:0001007!6.73e-07!155;UBERON:0001555!6.73e-07!155;UBERON:0007026!6.73e-07!155;UBERON:0001048!7.23e-07!168;UBERON:0000077!8.16e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.84e-24;19!UBERON:0006925;6.84e-24;19!UBERON:0002423;5.33e-21;25!UBERON:0002368;1.78e-13;33!UBERON:0002365;3.22e-13;31!UBERON:0002330;3.22e-13;31!UBERON:0001242;8.93e-10;4!UBERON:0001262;8.93e-10;4!UBERON:0004786;8.93e-10;4!UBERON:0004808;8.93e-10;4!UBERON:0001277;8.93e-10;4!UBERON:0005172;1.50e-09;52!UBERON:0005173;1.50e-09;52!UBERON:0000949;8.38e-08;43!UBERON:0002417;1.43e-07;58!UBERON:0000916;1.43e-07;58!UBERON:0002530;2.19e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.56e-24,19;UBERON:0006925,6.56e-24,19;UBERON:0008836,6.56e-24,19;UBERON:0009497,5.20e-21,25;UBERON:0000015,5.20e-21,25;UBERON:0002423,5.20e-21,25;UBERON:0006235,5.20e-21,25;UBERON:0004161,5.20e-21,25;UBERON:0008835,2.59e-20,22;UBERON:0003894,2.59e-20,22;UBERON:0009854,2.53e-19,23;UBERON:0003929,1.36e-17,54;UBERON:0007499,1.40e-17,25;UBERON:0009856,8.23e-17,26;UBERON:0005172,4.20e-15,54;UBERON:0005173,4.20e-15,54;UBERON:0002368,3.50e-14,35;UBERON:0002365,1.04e-13,31;UBERON:0002330,1.04e-13,31;UBERON:0002417,3.29e-13,60;UBERON:0000916,3.29e-13,60;UBERON:0005911,1.36e-11,82;UBERON:0000949,1.95e-10,45;UBERON:0002530,3.13e-10,59;UBERON:0001242,8.94e-10,4;UBERON:0001262,8.94e-10,4;UBERON:0004786,8.94e-10,4;UBERON:0004808,8.94e-10,4;UBERON:0001277,8.94e-10,4;UBERON:0004921,1.64e-07,118;UBERON:0003104,1.94e-07,160;UBERON:0009142,1.94e-07,160;UBERON:0005177,2.27e-07,101 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0.579386075843295,0,0,0,0,0,0.785874452986276,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0.709336764396714,3.36406560085384,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58633690910099,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.964044119533928,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,1.47008711385542,778.275913806041,487.482299472103,305.438381754286,0,45.6287106994951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,9.22456729165453,0,0,0,0,9.34462068884717,0.871533458600294,9.19751518874925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0,0,0,11.6025071607957,0,0,2.64073230778596,0,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,165.277782682947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,1.14378116354295,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,2.45622602532803,0,0,0.422215270595328,1.64647446479951,0,0,0,0,0,159.197167113534,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,7.69983884210687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,3.87733098438087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0,5.92498690404406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4961953579214,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,3.28971526382889,1.38869702463753,1.56019368401098,0,0,0.225980740780532,0,0,0,0,0,11.526461715925,0,0,0,0.514784993585894,0,0,0.707082103850386,0.543616824294456,0.313808538937,0,0.866851769704557,0,0,0,0,0,1.39641200636127,0,0,0.599037001496973,3.43380838509257,0.446342914883745,0,0,0,13.0780082629991,14.0931117831795,14.222147753233,12.2050077078288,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0,0.537862017998534,0,1.42939065274673,0.662091970365432,0.5085370753095,0,1.72844298240254,0,0,0,0,0,544.441548114076,221.28650448341,0,0,0.513260513652988,0,0.213574825135389,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,1.20206087197775,2.28483127301277,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,6.6476893326227,1.82696004375648,0.226705925512272,0,0.244736704506468,0.179088841081487,10.808050650634,22.1476890074494,0,7.71656153083659,0.506827321959218,0,0.690860683462397,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.593682160298,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,2.20858708199438,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0.437119121007915,0.470317296361523,0,0,0,0,0,0,0.0939839179798536,1.28915775947154,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0.506794004045748,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@SEBOX,p3@VTN | |||
}} |
Revision as of 12:44, 11 September 2013
Short description: | p3@SEBOX, p3@VTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SEBOX_5end, CAGE_peak_3_at_VTN_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 104bp_to_ENST00000536498, NM_000638, uc002hbc.2_5end |
EntrezGene: | 645832,7448 |
HGNC: | 12724&submit=Submit 32942, 12724 |
UniProt: | C9JDG5D9ZGG2P04004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.06e-21 | 12 |
intestinal epithelial cell | 8.94e-10 | 4 |
mesothelial cell | 2.68e-09 | 19 |
endodermal cell | 1.45e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 6.56e-24 | 19 |
digestive gland | 6.56e-24 | 19 |
liver bud | 6.56e-24 | 19 |
epithelium of foregut-midgut junction | 5.20e-21 | 25 |
anatomical boundary | 5.20e-21 | 25 |
hepatobiliary system | 5.20e-21 | 25 |
foregut-midgut junction | 5.20e-21 | 25 |
septum transversum | 5.20e-21 | 25 |
hepatic diverticulum | 2.59e-20 | 22 |
liver primordium | 2.59e-20 | 22 |
digestive tract diverticulum | 2.53e-19 | 23 |
gut epithelium | 1.36e-17 | 54 |
epithelial sac | 1.40e-17 | 25 |
sac | 8.23e-17 | 26 |
abdomen element | 4.20e-15 | 54 |
abdominal segment element | 4.20e-15 | 54 |
endocrine gland | 3.50e-14 | 35 |
exocrine gland | 1.04e-13 | 31 |
exocrine system | 1.04e-13 | 31 |
abdominal segment of trunk | 3.29e-13 | 60 |
abdomen | 3.29e-13 | 60 |
endo-epithelium | 1.36e-11 | 82 |
endocrine system | 1.95e-10 | 45 |
gland | 3.13e-10 | 59 |
intestinal mucosa | 8.94e-10 | 4 |
wall of intestine | 8.94e-10 | 4 |
gastrointestinal system mucosa | 8.94e-10 | 4 |
gastrointestinal system epithelium | 8.94e-10 | 4 |
intestinal epithelium | 8.94e-10 | 4 |
subdivision of digestive tract | 1.64e-07 | 118 |
mesenchyme | 1.94e-07 | 160 |
entire embryonic mesenchyme | 1.94e-07 | 160 |
trunk region element | 2.27e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.