FFCP PHASE1:Hg19::chr17:27050447..27050450,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26809|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10180|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000459584,NR_000014,uc002hcm.1_5end|coexpression_cluster_id=C229|description=CAGE_peak_1_at_SNORD42A_5end|id=chr17:27050447..27050450,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002623;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0002623,3.35e-07,3|ontology_enrichment_development_v019=UBERON:0006215;2.63e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.96e-09!57;UBERON:0005068!2.96e-09!57;UBERON:0006241!2.96e-09!57;UBERON:0007135!2.96e-09!57;UBERON:0001893!3.62e-08!34;UBERON:0002619!6.80e-08!22;UBERON:0001950!8.73e-08!20;UBERON:0002791!9.48e-08!33;UBERON:0002020!1.91e-07!34;UBERON:0003528!1.91e-07!34;UBERON:0003080!2.95e-07!42;UBERON:0001869!2.96e-07!32;UBERON:0002616!5.08e-07!59|ontology_enrichment_uberon_v019=UBERON:0002134;2.71e-19;1!UBERON:0005208;2.71e-19;1!UBERON:0004145;2.71e-19;1!UBERON:0005946;2.71e-19;1!UBERON:0005965;2.71e-19;1!UBERON:0002078;2.71e-19;1!UBERON:0002081;2.48e-10;2!UBERON:0002133;2.48e-10;2!UBERON:0001950;2.44e-08;20!UBERON:0002619;1.16e-07;22!UBERON:0003978;2.63e-07;3!UBERON:0004151;2.63e-07;3!UBERON:0000946;2.63e-07;3!UBERON:0000956;7.71e-07;25!UBERON:0000203;7.71e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.56e-19,1;UBERON:0005208,1.56e-19,1;UBERON:0005946,1.56e-19,1;UBERON:0005965,1.56e-19,1;UBERON:0002078,1.56e-19,1;UBERON:0002081,1.89e-10,2;UBERON:0002133,1.89e-10,2;UBERON:0010227,1.89e-10,2;UBERON:0001950,2.51e-08,20;UBERON:0002619,1.19e-07,22;UBERON:0003978,2.19e-07,3;UBERON:0009751,2.19e-07,3;UBERON:0004151,2.19e-07,3;UBERON:0000946,2.19e-07,3;UBERON:0002523,2.19e-07,3;UBERON:0005983,2.19e-07,3;UBERON:0004145,2.19e-07,3;UBERON:0002165,2.19e-07,3;UBERON:0002062,2.19e-07,3;UBERON:0007280,2.19e-07,3;UBERON:0002346,2.39e-07,86;UBERON:0000956,7.88e-07,25;UBERON:0000203,7.88e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,6.762422020448,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0,0,0.178428988797162,0.630809660135739,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.765676274967505,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0.140669416410513,0.333926115068718,0.16480387422676,0.422250816255987,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0,0.236387681767936,0.344743373241465,0.583209226766509,0.173624994933292,0,0.241192877250816,1.52581736317083,0.331737779793674,0.295547618953547,0,0,0,0.230850775511391,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0.498635045700469,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0.593042257361244,0.123563938946503,0,0.067401132980677,0,0,0.729819156862664,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0,0.300646838828985,0.103688191397247,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10180 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000459584,NR_000014,uc002hcm.1_5end | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_1_at_SNORD42A_5end | |||
|id=chr17:27050447..27050450,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.63e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.96e-09!57;UBERON:0005068!2.96e-09!57;UBERON:0006241!2.96e-09!57;UBERON:0007135!2.96e-09!57;UBERON:0001893!3.62e-08!34;UBERON:0002619!6.80e-08!22;UBERON:0001950!8.73e-08!20;UBERON:0002791!9.48e-08!33;UBERON:0002020!1.91e-07!34;UBERON:0003528!1.91e-07!34;UBERON:0003080!2.95e-07!42;UBERON:0001869!2.96e-07!32;UBERON:0002616!5.08e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.71e-19;1!UBERON:0005208;2.71e-19;1!UBERON:0004145;2.71e-19;1!UBERON:0005946;2.71e-19;1!UBERON:0005965;2.71e-19;1!UBERON:0002078;2.71e-19;1!UBERON:0002081;2.48e-10;2!UBERON:0002133;2.48e-10;2!UBERON:0001950;2.44e-08;20!UBERON:0002619;1.16e-07;22!UBERON:0003978;2.63e-07;3!UBERON:0004151;2.63e-07;3!UBERON:0000946;2.63e-07;3!UBERON:0000956;7.71e-07;25!UBERON:0000203;7.71e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.56e-19,1;UBERON:0005208,1.56e-19,1;UBERON:0005946,1.56e-19,1;UBERON:0005965,1.56e-19,1;UBERON:0002078,1.56e-19,1;UBERON:0002081,1.89e-10,2;UBERON:0002133,1.89e-10,2;UBERON:0010227,1.89e-10,2;UBERON:0001950,2.51e-08,20;UBERON:0002619,1.19e-07,22;UBERON:0003978,2.19e-07,3;UBERON:0009751,2.19e-07,3;UBERON:0004151,2.19e-07,3;UBERON:0000946,2.19e-07,3;UBERON:0002523,2.19e-07,3;UBERON:0005983,2.19e-07,3;UBERON:0004145,2.19e-07,3;UBERON:0002165,2.19e-07,3;UBERON:0002062,2.19e-07,3;UBERON:0007280,2.19e-07,3;UBERON:0002346,2.39e-07,86;UBERON:0000956,7.88e-07,25;UBERON:0000203,7.88e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,6.762422020448,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0,0,0.178428988797162,0.630809660135739,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.765676274967505,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0.140669416410513,0.333926115068718,0.16480387422676,0.422250816255987,0,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.227586896570999,0,0.236387681767936,0.344743373241465,0.583209226766509,0.173624994933292,0,0.241192877250816,1.52581736317083,0.331737779793674,0.295547618953547,0,0,0,0.230850775511391,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0.498635045700469,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0.593042257361244,0.123563938946503,0,0.067401132980677,0,0,0.729819156862664,0,0.242780379534093,0,1.20990716048664,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0.471388069233591,0.135904206073614,0.104602846312333,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,1.43574604915363,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0,0.395223263795889,0.60896299190448,0,0,0,0,0,0.157054096250234,0.886068179966986,0.488105059607853,0.500763722825999,0.573409195690071,0,0.0620964029413835,1.10678907948985,0,0,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0,0.637724760305049,3.34626563499306,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0.615349092722265,0.504143392443436,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0.261906694481422,0.163771917510097,0.147856086217045,0.135075169236789,0,0.620060389503552,0,1.09394961803644,0.548257766857182,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,1.03608082081518,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0,1.1598144313382,0,0,1.39265542612958,0,0.11294608203896,0.439762066981716,0,0.231522474323834,0.218559560503957,0,0,0.235676547101626,0.588925401344836,0.297046400327086,0,0,0,0.0644578879735772,0.0999411559249289,0,0.352894871715692,0,0,0,0.286679166302903,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0.0918948995348449,0.50141507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| |||
|short_description=p1@SNORD42A | |||
}} |
Revision as of 12:47, 11 September 2013
Short description: | p1@SNORD42A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNORD42A_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_ENST00000459584, NR_000014, uc002hcm.1_5end |
EntrezGene: | SNORD42A |
HGNC: | 10180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.56e-19 | 1 |
right atrium valve | 1.56e-19 | 1 |
outflow tract of atrium | 1.56e-19 | 1 |
outflow part of right atrium | 1.56e-19 | 1 |
right cardiac atrium | 1.56e-19 | 1 |
cardiac atrium | 1.89e-10 | 2 |
atrioventricular valve | 1.89e-10 | 2 |
future cardiac atrium | 1.89e-10 | 2 |
neocortex | 2.51e-08 | 20 |
regional part of cerebral cortex | 1.19e-07 | 22 |
valve | 2.19e-07 | 3 |
cardiac mesenchyme | 2.19e-07 | 3 |
cardiac chamber | 2.19e-07 | 3 |
cardial valve | 2.19e-07 | 3 |
tunica intima | 2.19e-07 | 3 |
heart layer | 2.19e-07 | 3 |
outflow tract | 2.19e-07 | 3 |
endocardium | 2.19e-07 | 3 |
endocardial cushion | 2.19e-07 | 3 |
presumptive endocardium | 2.19e-07 | 3 |
neurectoderm | 2.39e-07 | 86 |
cerebral cortex | 7.88e-07 | 25 |
pallium | 7.88e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.