FFCP PHASE1:Hg19::chr17:39928985..39929000,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3728|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6207|TSSclassifier=N|UniProt=C9J826|association_with_transcript=-464bp_to_ENST00000420370_5end|coexpression_cluster_id=C3631|description=CAGE_peak_16_at_JUP_5end|id=chr17:39928985..39929000,-|ontology_enrichment_celltype=CL:0000181!2.54e-24!12;CL:0000417!2.54e-24!12;CL:0000668!2.54e-24!12;CL:0000414!2.54e-24!12;CL:0000412!2.54e-24!12;CL:0000182!2.54e-24!12;CL:0000223!3.86e-12!59;CL:0002563!6.47e-09!4|ontology_enrichment_celltype_v019=CL:0000182;9.22e-59;12|ontology_enrichment_celltype_v019_2=CL:0000182,8.34e-59,12;CL:0000223,3.22e-12,58|ontology_enrichment_development_v019=UBERON:0004161;4.46e-64;11!UBERON:0009497;2.91e-54;13!UBERON:0001041;1.32e-23;30!UBERON:0003104;6.60e-23;31!CL:0000223;5.87e-08;58|ontology_enrichment_disease=DOID:3112!4.15e-09!1;DOID:299!8.51e-08!25|ontology_enrichment_disease_v019=DOID:3493;2.23e-11;2!DOID:7;6.05e-08;39|ontology_enrichment_disease_v019_2=DOID:3493,2.23e-11,2;DOID:7,1.93e-08,39|ontology_enrichment_uberon=UBERON:0002107!7.88e-27!19;UBERON:0006925!7.88e-27!19;UBERON:0008836!7.88e-27!19;UBERON:0009497!2.29e-25!25;UBERON:0000015!2.29e-25!25;UBERON:0002423!2.29e-25!25;UBERON:0006235!2.29e-25!25;UBERON:0004161!2.29e-25!25;UBERON:0005057!3.20e-24!26;UBERON:0003929!3.88e-23!54;UBERON:0008835!4.95e-23!22;UBERON:0003894!4.95e-23!22;UBERON:0009854!5.51e-22!23;UBERON:0007499!3.83e-20!25;UBERON:0009856!2.50e-19!26;UBERON:0005172!3.93e-19!55;UBERON:0005173!3.93e-19!55;UBERON:0002368!1.11e-17!35;UBERON:0002417!4.79e-17!61;UBERON:0000916!4.79e-17!61;UBERON:0002365!4.86e-16!31;UBERON:0002330!4.86e-16!31;UBERON:0005911!1.88e-14!82;UBERON:0000949!1.88e-13!45;UBERON:0002530!2.77e-12!59;UBERON:0001007!7.67e-12!155;UBERON:0001555!7.67e-12!155;UBERON:0007026!7.67e-12!155;UBERON:0004921!2.99e-11!129;UBERON:0004185!2.99e-11!129;UBERON:0004119!1.30e-10!169;UBERON:0000925!1.30e-10!169;UBERON:0006595!1.30e-10!169;UBERON:0000077!1.16e-09!130;UBERON:0001242!6.47e-09!4;UBERON:0001262!6.47e-09!4;UBERON:0004786!6.47e-09!4;UBERON:0004808!6.47e-09!4;UBERON:0001277!6.47e-09!4;UBERON:0005177!8.01e-09!107;UBERON:0001052!8.54e-09!4;UBERON:0009569!3.03e-08!113;UBERON:0000490!1.19e-07!138;UBERON:0005409!2.21e-07!35;UBERON:0003350!2.68e-07!5;UBERON:0004907!3.34e-07!5|ontology_enrichment_uberon_v019=UBERON:0002107;6.31e-66;19!UBERON:0006925;6.31e-66;19!UBERON:0002423;4.18e-50;25!UBERON:0002365;7.71e-39;31!UBERON:0002330;7.71e-39;31!UBERON:0002368;1.46e-33;33!UBERON:0000949;6.57e-24;43!UBERON:0002417;7.85e-15;58!UBERON:0000916;7.85e-15;58!UBERON:0005172;8.58e-15;52!UBERON:0005173;8.58e-15;52!UBERON:0002530;4.60e-12;57!UBERON:0001007;9.47e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.33e-66,19;UBERON:0006925,5.33e-66,19;UBERON:0008836,5.33e-66,19;UBERON:0008835,5.30e-57,22;UBERON:0003894,5.30e-57,22;UBERON:0009854,1.59e-54,23;UBERON:0007499,3.68e-50,25;UBERON:0009497,3.68e-50,25;UBERON:0000015,3.68e-50,25;UBERON:0002423,3.68e-50,25;UBERON:0006235,3.68e-50,25;UBERON:0004161,3.68e-50,25;UBERON:0009856,3.13e-48,26;UBERON:0002365,1.92e-40,31;UBERON:0002330,1.92e-40,31;UBERON:0002368,8.25e-36,35;UBERON:0000949,8.02e-28,45;UBERON:0003929,3.73e-23,54;UBERON:0005172,3.73e-23,54;UBERON:0005173,3.73e-23,54;UBERON:0002530,3.57e-21,59;UBERON:0002417,8.11e-21,60;UBERON:0000916,8.11e-21,60;UBERON:0005911,3.69e-15,82;UBERON:0001041,2.86e-14,87;UBERON:0005177,3.03e-12,101;UBERON:0009569,5.27e-11,112;UBERON:0003914,1.62e-10,117;UBERON:0004921,2.47e-10,118;UBERON:0005256,4.53e-10,122;UBERON:0001007,2.42e-08,145;UBERON:0001555,2.42e-08,145;UBERON:0007026,2.42e-08,145;UBERON:0000490,3.18e-08,148;UBERON:0001048,1.43e-07,160;UBERON:0003104,1.43e-07,160;UBERON:0009142,1.43e-07,160;UBERON:0004119,1.60e-07,160;UBERON:0000925,1.60e-07,160;UBERON:0006595,1.60e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,0,2.36315962672562,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0.21112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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3728 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |||
|TSSclassifier=N | |||
|UniProt=C9J826 | |||
|association_with_transcript=-464bp_to_ENST00000420370_5end | |||
|coexpression_cluster_id=C3631 | |||
|description=CAGE_peak_16_at_JUP_5end | |||
|id=chr17:39928985..39929000,- | |||
|ontology_enrichment_celltype=CL:0000181!2.54e-24!12;CL:0000417!2.54e-24!12;CL:0000668!2.54e-24!12;CL:0000414!2.54e-24!12;CL:0000412!2.54e-24!12;CL:0000182!2.54e-24!12;CL:0000223!3.86e-12!59;CL:0002563!6.47e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.22e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.34e-59,12;CL:0000223,3.22e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.46e-64;11!UBERON:0009497;2.91e-54;13!UBERON:0001041;1.32e-23;30!UBERON:0003104;6.60e-23;31!CL:0000223;5.87e-08;58 | |||
|ontology_enrichment_disease=DOID:3112!4.15e-09!1;DOID:299!8.51e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.23e-11;2!DOID:7;6.05e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.23e-11,2;DOID:7,1.93e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!7.88e-27!19;UBERON:0006925!7.88e-27!19;UBERON:0008836!7.88e-27!19;UBERON:0009497!2.29e-25!25;UBERON:0000015!2.29e-25!25;UBERON:0002423!2.29e-25!25;UBERON:0006235!2.29e-25!25;UBERON:0004161!2.29e-25!25;UBERON:0005057!3.20e-24!26;UBERON:0003929!3.88e-23!54;UBERON:0008835!4.95e-23!22;UBERON:0003894!4.95e-23!22;UBERON:0009854!5.51e-22!23;UBERON:0007499!3.83e-20!25;UBERON:0009856!2.50e-19!26;UBERON:0005172!3.93e-19!55;UBERON:0005173!3.93e-19!55;UBERON:0002368!1.11e-17!35;UBERON:0002417!4.79e-17!61;UBERON:0000916!4.79e-17!61;UBERON:0002365!4.86e-16!31;UBERON:0002330!4.86e-16!31;UBERON:0005911!1.88e-14!82;UBERON:0000949!1.88e-13!45;UBERON:0002530!2.77e-12!59;UBERON:0001007!7.67e-12!155;UBERON:0001555!7.67e-12!155;UBERON:0007026!7.67e-12!155;UBERON:0004921!2.99e-11!129;UBERON:0004185!2.99e-11!129;UBERON:0004119!1.30e-10!169;UBERON:0000925!1.30e-10!169;UBERON:0006595!1.30e-10!169;UBERON:0000077!1.16e-09!130;UBERON:0001242!6.47e-09!4;UBERON:0001262!6.47e-09!4;UBERON:0004786!6.47e-09!4;UBERON:0004808!6.47e-09!4;UBERON:0001277!6.47e-09!4;UBERON:0005177!8.01e-09!107;UBERON:0001052!8.54e-09!4;UBERON:0009569!3.03e-08!113;UBERON:0000490!1.19e-07!138;UBERON:0005409!2.21e-07!35;UBERON:0003350!2.68e-07!5;UBERON:0004907!3.34e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.31e-66;19!UBERON:0006925;6.31e-66;19!UBERON:0002423;4.18e-50;25!UBERON:0002365;7.71e-39;31!UBERON:0002330;7.71e-39;31!UBERON:0002368;1.46e-33;33!UBERON:0000949;6.57e-24;43!UBERON:0002417;7.85e-15;58!UBERON:0000916;7.85e-15;58!UBERON:0005172;8.58e-15;52!UBERON:0005173;8.58e-15;52!UBERON:0002530;4.60e-12;57!UBERON:0001007;9.47e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.33e-66,19;UBERON:0006925,5.33e-66,19;UBERON:0008836,5.33e-66,19;UBERON:0008835,5.30e-57,22;UBERON:0003894,5.30e-57,22;UBERON:0009854,1.59e-54,23;UBERON:0007499,3.68e-50,25;UBERON:0009497,3.68e-50,25;UBERON:0000015,3.68e-50,25;UBERON:0002423,3.68e-50,25;UBERON:0006235,3.68e-50,25;UBERON:0004161,3.68e-50,25;UBERON:0009856,3.13e-48,26;UBERON:0002365,1.92e-40,31;UBERON:0002330,1.92e-40,31;UBERON:0002368,8.25e-36,35;UBERON:0000949,8.02e-28,45;UBERON:0003929,3.73e-23,54;UBERON:0005172,3.73e-23,54;UBERON:0005173,3.73e-23,54;UBERON:0002530,3.57e-21,59;UBERON:0002417,8.11e-21,60;UBERON:0000916,8.11e-21,60;UBERON:0005911,3.69e-15,82;UBERON:0001041,2.86e-14,87;UBERON:0005177,3.03e-12,101;UBERON:0009569,5.27e-11,112;UBERON:0003914,1.62e-10,117;UBERON:0004921,2.47e-10,118;UBERON:0005256,4.53e-10,122;UBERON:0001007,2.42e-08,145;UBERON:0001555,2.42e-08,145;UBERON:0007026,2.42e-08,145;UBERON:0000490,3.18e-08,148;UBERON:0001048,1.43e-07,160;UBERON:0003104,1.43e-07,160;UBERON:0009142,1.43e-07,160;UBERON:0004119,1.60e-07,160;UBERON:0000925,1.60e-07,160;UBERON:0006595,1.60e-07,160 | |||
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|short_description=p16@JUP | |||
}} |
Revision as of 13:38, 11 September 2013
Short description: | p16@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_JUP_5end |
Coexpression cluster: | C3631_signet_liver_Hepatocyte_lung_gastrointestinal_duodenum_gall |
Association with transcript: | -464bp_to_ENST00000420370_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9J826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.34e-59 | 12 |
endodermal cell | 3.22e-12 | 58 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.23e-11 | 2 |
disease of anatomical entity | 1.93e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.