FFCP PHASE1:Hg19::chr17:42298386..42298397,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7343|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12511|TSSclassifier=S|UniProt=|association_with_transcript=-55bp_to_ENST00000343638_5end|description=CAGE_peak_20_at_UBTF_5end|id=chr17:42298386..42298397,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;7.40e-12;5!CL:0000306;2.14e-07;4!CL:0002222;2.14e-07;4!CL:0002224;2.14e-07;4!CL:0000163;8.61e-07;9|ontology_enrichment_celltype_v019_2=CL:0000097,1.59e-11,5;CL:0002028,1.59e-11,5;CL:0000306,1.69e-07,4;CL:0002222,1.69e-07,4;CL:0002224,1.69e-07,4|ontology_enrichment_development_v019=UBERON:0000358;4.87e-08;1!UBERON:0010226;1.34e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3111;1.34e-07;1!DOID:4235;1.34e-07;1!DOID:3603;1.34e-07;1|ontology_enrichment_disease_v019_2=DOID:3111,7.26e-08,1;DOID:3603,7.26e-08,1;DOID:4235,1.30e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002084;1.34e-07;1!UBERON:0001301;1.34e-07;1!UBERON:0002082;1.34e-07;1!UBERON:0010077;2.14e-07;4!UBERON:0005389;2.14e-07;4!UBERON:0000484;2.14e-07;4!UBERON:0000965;2.14e-07;4!UBERON:0001803;2.14e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002084,9.44e-08,1;UBERON:0002082,9.44e-08,1;UBERON:0010226,9.44e-08,1;UBERON:0010077,1.69e-07,4;UBERON:0005389,1.69e-07,4;UBERON:0000484,1.69e-07,4;UBERON:0002546,1.69e-07,4;UBERON:0000965,1.69e-07,4;UBERON:0001803,1.69e-07,4;UBERON:0003073,1.69e-07,4;UBERON:0005426,1.69e-07,4;UBERON:0001301,2.31e-07,1|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,0,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0.572471974262113,0.273748850145768,0.251085279189606,0.458480434487708,0.0821005894499457,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0.6024118375565,0,0.154934401160603,0.426507697462265,0,0,0,0.434021741431704,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0.39783335439818,0,0,0.546138611262131,0.889509253863555,0,0.800791974072025,0,0,0.954053754535364,1.1384259382189,0.587237189370939,0.382273228125229,2.64342657158052,0,0.526768169550154,0,0.393010762749165,0.822405995998037,0.334372990781356,0.977766799900771,0.946895611469467,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.512365278902701,0.650296737799391,0.328875809207352,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0,0.383220493601921,0,0.506039384039006,0,0.651083453856419,0.950452044448374,0,0.255973222308837,0,0.710331756132051,0.821127996921047,0.201606743224732,0.267440195783507,1.01377082717959,0,0,0.383587685530591,1.0843174571537,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.702678285545008,0.392937226493138,0.364295288292542,0.741568885568859,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.825354125820202,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0.560677600142307,0,0.98667019366864,0.933633106199299,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0,0.570471821544449,0,0.23486899728753,0.323745888736263,0,0,0.245668634623536,0.309977343527296,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0.37223371266318,0.675105328965065,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0.386521706326594,0,0.573609190778008,0.243947412259191,0.397589304964456,0.232387885739037,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0.337169380156203,0.482022059766964,0.330881918197182,0.871517776369625,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0.277765335475589,0,1.03993478527958,1.44331342025273,0.231860809950154,0,0,0.462985512576611,0,0,0,0,0.468008530278475,0,0,0,0.141775097242386,0.53735113621709,0.581267877027924,0.766765358330422,0,0.616339038092582,1.03664057770386,1.00883967391873,1.2624243342638,0.190493682876507,0.381988425558278,0,0,0.719792448923265,0.300343057843917,0.285826432630578,0.224262168690721,0.43596006883328,0.4400297149257,0.387815147273333,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0,0,0,0.871533458600294,0.299918973546171,1.2162378064119,0,0,0.239624855491583,0,0,0.434343920002738,0,0.358121926479791,0.560425719967636,0.394061520403854,0.431255149719035,0.898401253958239,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.736148950314839,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0.184369168541703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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12511 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-55bp_to_ENST00000343638_5end | |||
|description=CAGE_peak_20_at_UBTF_5end | |||
|id=chr17:42298386..42298397,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;7.40e-12;5!CL:0000306;2.14e-07;4!CL:0002222;2.14e-07;4!CL:0002224;2.14e-07;4!CL:0000163;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.59e-11,5;CL:0002028,1.59e-11,5;CL:0000306,1.69e-07,4;CL:0002222,1.69e-07,4;CL:0002224,1.69e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.87e-08;1!UBERON:0010226;1.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;1.34e-07;1!DOID:4235;1.34e-07;1!DOID:3603;1.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,7.26e-08,1;DOID:3603,7.26e-08,1;DOID:4235,1.30e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.34e-07;1!UBERON:0001301;1.34e-07;1!UBERON:0002082;1.34e-07;1!UBERON:0010077;2.14e-07;4!UBERON:0005389;2.14e-07;4!UBERON:0000484;2.14e-07;4!UBERON:0000965;2.14e-07;4!UBERON:0001803;2.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,9.44e-08,1;UBERON:0002082,9.44e-08,1;UBERON:0010226,9.44e-08,1;UBERON:0010077,1.69e-07,4;UBERON:0005389,1.69e-07,4;UBERON:0000484,1.69e-07,4;UBERON:0002546,1.69e-07,4;UBERON:0000965,1.69e-07,4;UBERON:0001803,1.69e-07,4;UBERON:0003073,1.69e-07,4;UBERON:0005426,1.69e-07,4;UBERON:0001301,2.31e-07,1 | |||
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| |||
|short_description=p20@UBTF | |||
}} |
Revision as of 13:52, 11 September 2013
Short description: | p20@UBTF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_UBTF_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_ENST00000343638_5end |
EntrezGene: | UBTF |
HGNC: | 12511 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.59e-11 | 5 |
basophil mast progenitor cell | 1.59e-11 | 5 |
crystallin accumulating cell | 1.69e-07 | 4 |
vertebrate lens cell | 1.69e-07 | 4 |
lens epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 9.44e-08 | 1 |
cardiac ventricle | 9.44e-08 | 1 |
future cardiac ventricle | 9.44e-08 | 1 |
cuboidal epithelium | 1.69e-07 | 4 |
transparent eye structure | 1.69e-07 | 4 |
simple cuboidal epithelium | 1.69e-07 | 4 |
cranial placode | 1.69e-07 | 4 |
lens of camera-type eye | 1.69e-07 | 4 |
epithelium of lens | 1.69e-07 | 4 |
lens placode | 1.69e-07 | 4 |
lens vesicle | 1.69e-07 | 4 |
epididymis | 2.31e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 7.26e-08 | 1 |
mucinous cystadenocarcinoma | 7.26e-08 | 1 |
spindle cell sarcoma | 1.30e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.