FFCP PHASE1:Hg19::chr17:58165788..58165794,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=645638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=33bp_to_NR_030732_5end|coexpression_cluster_id=C61|description=CAGE_peak_1_at_LOC645638_5end|id=chr17:58165788..58165794,-|ontology_enrichment_celltype=CL:0000990!1.71e-26!8;CL:0000451!1.68e-21!10;CL:0000453!1.22e-16!5;CL:0000840!2.22e-13!5;CL:0001029!2.22e-13!5|ontology_enrichment_celltype_v019=CL:0000453;6.64e-89;5!CL:0000990;5.60e-50;8!CL:0000511;6.58e-50;1!CL:0002625;6.58e-50;1!CL:0000216;6.58e-50;1!CL:0000451;4.07e-41;10!CL:0000154;1.57e-09;6|ontology_enrichment_celltype_v019_2=CL:0000453,6.64e-89,5;CL:0000990,5.60e-50,8;CL:0000511,6.58e-50,1;CL:0002625,6.58e-50,1;CL:0000216,6.58e-50,1;CL:0000451,4.07e-41,10;CL:0000154,1.57e-09,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!2.72e-07!3;UBERON:0004854!2.72e-07!3;UBERON:0009034!2.72e-07!3;UBERON:0002095!2.72e-07!3;UBERON:0004782!2.72e-07!3;UBERON:0003281!2.72e-07!3;UBERON:0009664!2.72e-07!3;UBERON:0002296!2.72e-07!3;UBERON:0005602!2.72e-07!3;UBERON:0001179!2.72e-07!3;UBERON:0006293!2.72e-07!3|ontology_enrichment_uberon_v019=UBERON:0001136;6.58e-50;1!UBERON:0001343;6.58e-50;1!UBERON:0004910;6.58e-50;1!UBERON:0004813;6.58e-50;1!UBERON:0004909;9.18e-26;2!UBERON:0005904;1.29e-13;4!UBERON:0000473;1.80e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.58e-50,1;UBERON:0001343,6.58e-50,1;UBERON:0004910,6.58e-50,1;UBERON:0005154,6.58e-50,1;UBERON:0005295,6.58e-50,1;UBERON:0004813,6.58e-50,1;UBERON:0005297,6.58e-50,1;UBERON:0005294,6.58e-50,1;UBERON:0010141,6.58e-50,1;UBERON:0005891,6.58e-50,1;UBERON:0004909,9.18e-26,2;UBERON:0005904,1.29e-13,4;UBERON:0000473,1.80e-07,8;UBERON:0004871,1.80e-07,8|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,2.79016164658062,2.45348091383766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@LOC645638}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=645638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=33bp_to_NR_030732_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_1_at_LOC645638_5end | |||
|id=chr17:58165788..58165794,- | |||
|ontology_enrichment_celltype=CL:0000990!1.71e-26!8;CL:0000451!1.68e-21!10;CL:0000453!1.22e-16!5;CL:0000840!2.22e-13!5;CL:0001029!2.22e-13!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.64e-89;5!CL:0000990;5.60e-50;8!CL:0000511;6.58e-50;1!CL:0002625;6.58e-50;1!CL:0000216;6.58e-50;1!CL:0000451;4.07e-41;10!CL:0000154;1.57e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.64e-89,5;CL:0000990,5.60e-50,8;CL:0000511,6.58e-50,1;CL:0002625,6.58e-50,1;CL:0000216,6.58e-50,1;CL:0000451,4.07e-41,10;CL:0000154,1.57e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.72e-07!3;UBERON:0004854!2.72e-07!3;UBERON:0009034!2.72e-07!3;UBERON:0002095!2.72e-07!3;UBERON:0004782!2.72e-07!3;UBERON:0003281!2.72e-07!3;UBERON:0009664!2.72e-07!3;UBERON:0002296!2.72e-07!3;UBERON:0005602!2.72e-07!3;UBERON:0001179!2.72e-07!3;UBERON:0006293!2.72e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.58e-50;1!UBERON:0001343;6.58e-50;1!UBERON:0004910;6.58e-50;1!UBERON:0004813;6.58e-50;1!UBERON:0004909;9.18e-26;2!UBERON:0005904;1.29e-13;4!UBERON:0000473;1.80e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.58e-50,1;UBERON:0001343,6.58e-50,1;UBERON:0004910,6.58e-50,1;UBERON:0005154,6.58e-50,1;UBERON:0005295,6.58e-50,1;UBERON:0004813,6.58e-50,1;UBERON:0005297,6.58e-50,1;UBERON:0005294,6.58e-50,1;UBERON:0010141,6.58e-50,1;UBERON:0005891,6.58e-50,1;UBERON:0004909,9.18e-26,2;UBERON:0005904,1.29e-13,4;UBERON:0000473,1.80e-07,8;UBERON:0004871,1.80e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,2.79016164658062,2.45348091383766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC645638 | |||
}} |
Revision as of 14:53, 11 September 2013
Short description: | p1@LOC645638 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC645638_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 33bp_to_NR_030732_5end |
EntrezGene: | LOC645638 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.64e-89 | 5 |
conventional dendritic cell | 5.60e-50 | 8 |
androgen binding protein secreting cell | 6.58e-50 | 1 |
seminiferous tubule epithelial cell | 6.58e-50 | 1 |
Sertoli cell | 6.58e-50 | 1 |
dendritic cell | 4.07e-41 | 10 |
protein secreting cell | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.58e-50 | 1 |
seminiferous tubule of testis | 6.58e-50 | 1 |
epithelium of male gonad | 6.58e-50 | 1 |
epithelial cord | 6.58e-50 | 1 |
sex cord | 6.58e-50 | 1 |
seminiferous tubule epithelium | 6.58e-50 | 1 |
testis sex cord | 6.58e-50 | 1 |
genital ridge | 6.58e-50 | 1 |
primitive sex cord of indifferent gonad | 6.58e-50 | 1 |
coelomic epithelium | 6.58e-50 | 1 |
epithelium of gonad | 9.18e-26 | 2 |
duct of male reproductive system | 1.29e-13 | 4 |
testis | 1.80e-07 | 8 |
somatic layer of lateral plate mesoderm | 1.80e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.