FFCP PHASE1:Hg19::chr17:7095595..7095641,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1742|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2903|TSSclassifier=S|UniProt=|association_with_transcript=-41bp_to_ENST00000489885_5end|coexpression_cluster_id=C85|description=CAGE_peak_5_at_DLG4_5end|id=chr17:7095595..7095641,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;1.41e-08;6!CL:0000404;1.41e-08;6|ontology_enrichment_celltype_v019_2=CL:0000047,5.95e-11,8;CL:0000540,1.39e-08,6;CL:0000031,1.39e-08,6;CL:0000404,1.39e-08,6|ontology_enrichment_development_v019=UBERON:0006215;7.34e-17;3!CL:0000031;1.41e-08;6!UBERON:0006601;8.18e-08;82!UBERON:0003056;1.86e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.94e-32!82;UBERON:0005743!3.05e-31!86;UBERON:0000073!1.54e-30!94;UBERON:0001016!1.54e-30!94;UBERON:0001049!2.89e-29!57;UBERON:0005068!2.89e-29!57;UBERON:0006241!2.89e-29!57;UBERON:0007135!2.89e-29!57;UBERON:0002346!3.03e-26!90;UBERON:0002616!7.63e-25!59;UBERON:0000955!1.02e-23!69;UBERON:0006238!1.02e-23!69;UBERON:0003075!3.76e-23!86;UBERON:0007284!3.76e-23!86;UBERON:0002780!4.81e-19!41;UBERON:0001890!4.81e-19!41;UBERON:0006240!4.81e-19!41;UBERON:0003080!2.32e-18!42;UBERON:0001950!3.39e-18!20;UBERON:0002619!4.76e-18!22;UBERON:0002020!4.87e-18!34;UBERON:0003528!4.87e-18!34;UBERON:0007023!1.03e-17!115;UBERON:0001893!1.19e-17!34;UBERON:0000924!1.03e-16!173;UBERON:0006601!1.03e-16!173;UBERON:0002791!1.21e-16!33;UBERON:0001869!3.00e-16!32;UBERON:0000956!3.62e-15!25;UBERON:0000203!3.62e-15!25;UBERON:0003056!8.02e-15!61;UBERON:0004121!1.37e-14!169;UBERON:0000153!2.83e-13!129;UBERON:0007811!2.83e-13!129;UBERON:0003076!1.41e-12!15;UBERON:0003057!1.41e-12!15;UBERON:0000033!1.68e-12!123;UBERON:0004732!3.14e-11!13;UBERON:0004733!4.22e-10!12;UBERON:0002028!4.22e-10!12;UBERON:0007277!4.22e-10!12;UBERON:0000200!7.95e-09!6;UBERON:0002298!5.71e-08!8;UBERON:0001872!7.73e-08!5;UBERON:0002680!6.70e-07!9;UBERON:0001895!6.70e-07!9;UBERON:0010092!6.70e-07!9|ontology_enrichment_uberon_v019=UBERON:0001950;9.89e-38;20!UBERON:0002619;3.27e-34;22!UBERON:0000956;6.00e-30;25!UBERON:0000203;6.00e-30;25!UBERON:0001872;9.88e-26;5!UBERON:0000073;6.12e-24;53!UBERON:0002616;6.12e-24;53!UBERON:0001869;7.81e-23;32!UBERON:0001893;9.22e-22;34!UBERON:0000200;5.07e-21;6!UBERON:0002791;3.28e-19;32!UBERON:0004732;1.51e-18;13!UBERON:0003528;5.84e-18;34!UBERON:0002020;5.84e-18;34!UBERON:0002780;1.58e-17;41!UBERON:0001890;1.58e-17;41!UBERON:0002021;7.15e-16;5!UBERON:0001016;1.48e-15;83!UBERON:0000955;1.52e-15;68!UBERON:0004733;4.54e-15;12!UBERON:0002028;4.54e-15;12!UBERON:0001017;1.40e-13;75!UBERON:0002771;4.07e-11;2!UBERON:0002680;1.06e-09;9!UBERON:0001895;1.06e-09;9!UBERON:0002037;1.18e-08;6!UBERON:0002298;4.67e-08;6!UBERON:0001896;1.86e-07;3!UBERON:0005290;1.86e-07;3!UBERON:0001871;5.76e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.50e-43,89;UBERON:0001017,4.85e-42,81;UBERON:0000073,2.78e-40,53;UBERON:0002616,2.78e-40,53;UBERON:0001049,6.71e-38,56;UBERON:0005068,6.71e-38,56;UBERON:0006241,6.71e-38,56;UBERON:0007135,6.71e-38,56;UBERON:0001950,7.00e-38,20;UBERON:0000955,3.87e-36,68;UBERON:0006238,3.87e-36,68;UBERON:0002346,4.67e-36,86;UBERON:0002619,2.39e-34,22;UBERON:0003075,2.51e-32,82;UBERON:0007284,2.51e-32,82;UBERON:0000956,4.55e-30,25;UBERON:0000203,4.55e-30,25;UBERON:0004121,5.80e-27,171;UBERON:0000924,5.80e-27,171;UBERON:0006601,5.80e-27,171;UBERON:0002780,6.11e-27,41;UBERON:0001890,6.11e-27,41;UBERON:0003080,6.11e-27,41;UBERON:0006240,6.11e-27,41;UBERON:0001869,8.05e-27,32;UBERON:0010371,9.27e-27,104;UBERON:0001872,1.79e-25,5;UBERON:0001893,4.08e-25,34;UBERON:0003056,1.00e-24,61;UBERON:0002791,4.17e-23,32;UBERON:0003528,1.25e-21,34;UBERON:0002020,1.25e-21,34;UBERON:0000200,7.42e-21,6;UBERON:0004732,1.50e-18,13;UBERON:0010314,4.41e-18,132;UBERON:0002021,3.66e-16,5;UBERON:0011216,4.45e-15,223;UBERON:0004733,4.56e-15,12;UBERON:0002028,4.56e-15,12;UBERON:0007277,4.56e-15,12;UBERON:0007023,4.14e-13,114;UBERON:0003076,6.21e-12,15;UBERON:0003057,6.21e-12,15;UBERON:0002771,4.52e-11,2;UBERON:0002680,1.06e-09,9;UBERON:0001895,1.06e-09,9;UBERON:0010092,1.06e-09,9;UBERON:0002037,1.20e-08,6;UBERON:0006215,1.20e-08,6;UBERON:0002298,4.62e-08,6;UBERON:0000025,9.17e-08,192;UBERON:0001896,1.86e-07,3;UBERON:0005290,1.86e-07,3;UBERON:0010096,1.86e-07,3;UBERON:0001871,5.04e-07,6|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2903 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-41bp_to_ENST00000489885_5end | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_5_at_DLG4_5end | |||
|id=chr17:7095595..7095641,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.41e-08;6!CL:0000404;1.41e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.95e-11,8;CL:0000540,1.39e-08,6;CL:0000031,1.39e-08,6;CL:0000404,1.39e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.34e-17;3!CL:0000031;1.41e-08;6!UBERON:0006601;8.18e-08;82!UBERON:0003056;1.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;9.89e-38;20!UBERON:0002619;3.27e-34;22!UBERON:0000956;6.00e-30;25!UBERON:0000203;6.00e-30;25!UBERON:0001872;9.88e-26;5!UBERON:0000073;6.12e-24;53!UBERON:0002616;6.12e-24;53!UBERON:0001869;7.81e-23;32!UBERON:0001893;9.22e-22;34!UBERON:0000200;5.07e-21;6!UBERON:0002791;3.28e-19;32!UBERON:0004732;1.51e-18;13!UBERON:0003528;5.84e-18;34!UBERON:0002020;5.84e-18;34!UBERON:0002780;1.58e-17;41!UBERON:0001890;1.58e-17;41!UBERON:0002021;7.15e-16;5!UBERON:0001016;1.48e-15;83!UBERON:0000955;1.52e-15;68!UBERON:0004733;4.54e-15;12!UBERON:0002028;4.54e-15;12!UBERON:0001017;1.40e-13;75!UBERON:0002771;4.07e-11;2!UBERON:0002680;1.06e-09;9!UBERON:0001895;1.06e-09;9!UBERON:0002037;1.18e-08;6!UBERON:0002298;4.67e-08;6!UBERON:0001896;1.86e-07;3!UBERON:0005290;1.86e-07;3!UBERON:0001871;5.76e-07;6 | |||
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|short_description=p5@DLG4 | |||
}} |
Revision as of 15:24, 11 September 2013
Short description: | p5@DLG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_DLG4_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -41bp_to_ENST00000489885_5end |
EntrezGene: | DLG4 |
HGNC: | 2903 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.95e-11 | 8 |
neuron | 1.39e-08 | 6 |
neuroblast | 1.39e-08 | 6 |
electrically signaling cell | 1.39e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.