FFCP PHASE1:Hg19::chr18:56296339..56296349,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115701|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20565|TSSclassifier=N|UniProt=Q86TB3|association_with_transcript=-150bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end|coexpression_cluster_id=C1057|description=CAGE_peak_29_at_ALPK2_5end|id=chr18:56296339..56296349,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000946;3.73e-14;1!CL:0000786;3.73e-14;1!CL:0000333;8.71e-11;5|ontology_enrichment_celltype_v019_2=CL:0000946,3.98e-14,1;CL:0000786,3.98e-14,1;CL:0000980,3.98e-14,1;CL:0000785,1.05e-07,2;CL:0000955,1.05e-07,2;CL:0000818,1.05e-07,2;CL:0000954,1.05e-07,2;CL:0000816,1.05e-07,2|ontology_enrichment_development_v019=UBERON:0004140;3.73e-14;1!UBERON:0010227;5.85e-14;1!UBERON:0005062;3.02e-13;4!UBERON:0007284;3.02e-13;4!UBERON:0004872;3.39e-08;7!CL:0000954;1.02e-07;2|ontology_enrichment_disease=DOID:3095!6.25e-09!22;DOID:2994!6.25e-09!22;DOID:1287!1.43e-08!4;DOID:114!4.22e-08!2|ontology_enrichment_disease_v019=DOID:0050619;1.25e-13;1!DOID:1357;1.25e-13;1!DOID:169;3.86e-09;6!DOID:114;1.87e-07;2|ontology_enrichment_disease_v019_2=DOID:0050619,9.73e-14,1;DOID:1357,9.73e-14,1;DOID:169,3.71e-09,6;DOID:114,1.54e-07,2|ontology_enrichment_uberon=UBERON:0001042!2.51e-08!10;UBERON:0009145!2.51e-08!10;UBERON:0002370!3.08e-08!4;UBERON:0005058!3.08e-08!4;UBERON:0009113!3.08e-08!4;UBERON:0003295!3.08e-08!4;UBERON:0005562!3.08e-08!4;UBERON:0004177!3.38e-08!7;UBERON:0006562!1.53e-07!11;UBERON:0007100!1.82e-07!27;UBERON:0000013!6.26e-07!5;UBERON:0002410!6.26e-07!5|ontology_enrichment_uberon_v019=UBERON:0007100;1.54e-17;25!UBERON:0003978;2.49e-17;3!UBERON:0000946;2.49e-17;3!UBERON:0002079;5.85e-14;1!UBERON:0002135;1.25e-13;1!UBERON:0002146;1.25e-13;1!UBERON:0001389;1.25e-13;1!UBERON:0001764;1.25e-13;1!UBERON:0000026;1.25e-13;1!UBERON:0008784;1.25e-13;1!UBERON:0006058;1.25e-13;1!UBERON:0003663;1.25e-13;1!UBERON:0004256;1.25e-13;1!UBERON:0001825;1.25e-13;1!UBERON:0004708;1.25e-13;1!UBERON:0002101;1.25e-13;1!UBERON:0004709;1.25e-13;1!UBERON:0005623;1.25e-13;1!UBERON:0002529;1.25e-13;1!UBERON:0010538;1.25e-13;1!UBERON:0003661;1.25e-13;1!UBERON:0010890;1.25e-13;1!UBERON:0002471;1.25e-13;1!UBERON:0001383;1.25e-13;1!UBERON:0010758;1.25e-13;1!UBERON:0010707;1.25e-13;1!UBERON:0000978;1.25e-13;1!UBERON:0002103;1.25e-13;1!UBERON:0001665;1.25e-13;1!UBERON:0003823;1.25e-13;1!UBERON:0000154;1.25e-13;1!UBERON:0010709;1.25e-13;1!UBERON:0000013;8.71e-11;5!UBERON:0002410;8.71e-11;5!UBERON:0000948;2.42e-09;22!UBERON:0002081;1.27e-07;2!UBERON:0005090;1.87e-07;2!UBERON:0001630;1.87e-07;2!UBERON:0002133;1.87e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.50e-17,3;UBERON:0009751,2.50e-17,3;UBERON:0000946,2.50e-17,3;UBERON:0002523,2.50e-17,3;UBERON:0005983,2.50e-17,3;UBERON:0002165,2.50e-17,3;UBERON:0002062,2.50e-17,3;UBERON:0007280,2.50e-17,3;UBERON:0007100,2.99e-16,27;UBERON:0002079,5.15e-14,1;UBERON:0001764,9.73e-14,1;UBERON:0001825,9.73e-14,1;UBERON:0002146,1.10e-13,1;UBERON:0005623,1.10e-13,1;UBERON:0005418,1.25e-13,1;UBERON:0001389,1.25e-13,1;UBERON:0000026,1.25e-13,1;UBERON:0008784,1.25e-13,1;UBERON:0006058,1.25e-13,1;UBERON:0003663,1.25e-13,1;UBERON:0004256,1.25e-13,1;UBERON:0004708,1.25e-13,1;UBERON:0002101,1.25e-13,1;UBERON:0004709,1.25e-13,1;UBERON:0002529,1.25e-13,1;UBERON:0010538,1.25e-13,1;UBERON:0003661,1.25e-13,1;UBERON:0010890,1.25e-13,1;UBERON:0002471,1.25e-13,1;UBERON:0001383,1.25e-13,1;UBERON:0004357,1.25e-13,1;UBERON:0004347,1.25e-13,1;UBERON:0005420,1.25e-13,1;UBERON:0005732,1.25e-13,1;UBERON:0010758,1.25e-13,1;UBERON:0010707,1.25e-13,1;UBERON:0000978,1.25e-13,1;UBERON:0002103,1.25e-13,1;UBERON:0001665,1.25e-13,1;UBERON:0003823,1.25e-13,1;UBERON:0000154,1.25e-13,1;UBERON:0010709,1.25e-13,1;UBERON:0005733,1.25e-13,1;UBERON:0005730,1.25e-13,1;UBERON:0002135,1.42e-13,1;UBERON:0000013,8.29e-11,5;UBERON:0002410,8.29e-11,5;UBERON:0000948,1.35e-08,24;UBERON:0005498,1.35e-08,24;UBERON:0004140,1.35e-08,24;UBERON:0009881,1.35e-08,24;UBERON:0004141,1.35e-08,24;UBERON:0003084,1.35e-08,24;UBERON:0007005,1.35e-08,24;UBERON:0004139,1.35e-08,24;UBERON:0004291,1.35e-08,24;UBERON:0004797,5.87e-08,7;UBERON:0002081,1.20e-07,2;UBERON:0010227,1.20e-07,2;UBERON:0005090,1.87e-07,2;UBERON:0001630,1.87e-07,2;UBERON:0002133,1.99e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=N | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=-150bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | |||
|coexpression_cluster_id=C1057 | |||
|description=CAGE_peak_29_at_ALPK2_5end | |||
|id=chr18:56296339..56296349,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000946;3.73e-14;1!CL:0000786;3.73e-14;1!CL:0000333;8.71e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.98e-14,1;CL:0000786,3.98e-14,1;CL:0000980,3.98e-14,1;CL:0000785,1.05e-07,2;CL:0000955,1.05e-07,2;CL:0000818,1.05e-07,2;CL:0000954,1.05e-07,2;CL:0000816,1.05e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.73e-14;1!UBERON:0010227;5.85e-14;1!UBERON:0005062;3.02e-13;4!UBERON:0007284;3.02e-13;4!UBERON:0004872;3.39e-08;7!CL:0000954;1.02e-07;2 | |||
|ontology_enrichment_disease=DOID:3095!6.25e-09!22;DOID:2994!6.25e-09!22;DOID:1287!1.43e-08!4;DOID:114!4.22e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.25e-13;1!DOID:1357;1.25e-13;1!DOID:169;3.86e-09;6!DOID:114;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.73e-14,1;DOID:1357,9.73e-14,1;DOID:169,3.71e-09,6;DOID:114,1.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001042!2.51e-08!10;UBERON:0009145!2.51e-08!10;UBERON:0002370!3.08e-08!4;UBERON:0005058!3.08e-08!4;UBERON:0009113!3.08e-08!4;UBERON:0003295!3.08e-08!4;UBERON:0005562!3.08e-08!4;UBERON:0004177!3.38e-08!7;UBERON:0006562!1.53e-07!11;UBERON:0007100!1.82e-07!27;UBERON:0000013!6.26e-07!5;UBERON:0002410!6.26e-07!5 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.50e-17,3;UBERON:0009751,2.50e-17,3;UBERON:0000946,2.50e-17,3;UBERON:0002523,2.50e-17,3;UBERON:0005983,2.50e-17,3;UBERON:0002165,2.50e-17,3;UBERON:0002062,2.50e-17,3;UBERON:0007280,2.50e-17,3;UBERON:0007100,2.99e-16,27;UBERON:0002079,5.15e-14,1;UBERON:0001764,9.73e-14,1;UBERON:0001825,9.73e-14,1;UBERON:0002146,1.10e-13,1;UBERON:0005623,1.10e-13,1;UBERON:0005418,1.25e-13,1;UBERON:0001389,1.25e-13,1;UBERON:0000026,1.25e-13,1;UBERON:0008784,1.25e-13,1;UBERON:0006058,1.25e-13,1;UBERON:0003663,1.25e-13,1;UBERON:0004256,1.25e-13,1;UBERON:0004708,1.25e-13,1;UBERON:0002101,1.25e-13,1;UBERON:0004709,1.25e-13,1;UBERON:0002529,1.25e-13,1;UBERON:0010538,1.25e-13,1;UBERON:0003661,1.25e-13,1;UBERON:0010890,1.25e-13,1;UBERON:0002471,1.25e-13,1;UBERON:0001383,1.25e-13,1;UBERON:0004357,1.25e-13,1;UBERON:0004347,1.25e-13,1;UBERON:0005420,1.25e-13,1;UBERON:0005732,1.25e-13,1;UBERON:0010758,1.25e-13,1;UBERON:0010707,1.25e-13,1;UBERON:0000978,1.25e-13,1;UBERON:0002103,1.25e-13,1;UBERON:0001665,1.25e-13,1;UBERON:0003823,1.25e-13,1;UBERON:0000154,1.25e-13,1;UBERON:0010709,1.25e-13,1;UBERON:0005733,1.25e-13,1;UBERON:0005730,1.25e-13,1;UBERON:0002135,1.42e-13,1;UBERON:0000013,8.29e-11,5;UBERON:0002410,8.29e-11,5;UBERON:0000948,1.35e-08,24;UBERON:0005498,1.35e-08,24;UBERON:0004140,1.35e-08,24;UBERON:0009881,1.35e-08,24;UBERON:0004141,1.35e-08,24;UBERON:0003084,1.35e-08,24;UBERON:0007005,1.35e-08,24;UBERON:0004139,1.35e-08,24;UBERON:0004291,1.35e-08,24;UBERON:0004797,5.87e-08,7;UBERON:0002081,1.20e-07,2;UBERON:0010227,1.20e-07,2;UBERON:0005090,1.87e-07,2;UBERON:0001630,1.87e-07,2;UBERON:0002133,1.99e-07,2 | |||
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|short_description=p29@ALPK2 | |||
}} |
Revision as of 17:53, 11 September 2013
Short description: | p29@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_ALPK2_5end |
Coexpression cluster: | C1057_heart_teratocarcinoma_lymphangiectasia_plasma_adult_left_skeletal |
Association with transcript: | -150bp_to_ENST00000361673, NM_052947, uc002lhj.3_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.98e-14 | 1 |
plasma cell | 3.98e-14 | 1 |
plasmablast | 3.98e-14 | 1 |
mature B cell | 1.05e-07 | 2 |
pre-B-II cell | 1.05e-07 | 2 |
transitional stage B cell | 1.05e-07 | 2 |
small pre-B-II cell | 1.05e-07 | 2 |
immature B cell | 1.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.73e-14 | 1 |
maxillary sinus cancer | 9.73e-14 | 1 |
neuroendocrine tumor | 3.71e-09 | 6 |
heart disease | 1.54e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.