FFCP PHASE1:Hg19::chr18:76829385..76829438,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=374868|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13541|TSSclassifier=S|UniProt=O43861,A6NH10,F2Z2D8,F5H3M8,B3KSI8,Q69YZ7,Q7Z3J4,Q7Z6L4|association_with_transcript=0bp_to_ENST00000307671,ENST00000359184,ENST00000426216,ENST00000490210,ENST00000542323,NM_198531,uc002lmu.2,uc002lmv.1,uc002lmw.1,uc002lmx.2_5end|coexpression_cluster_id=C723|description=CAGE_peak_1_at_ATP9B_5end|id=chr18:76829385..76829438,+|ontology_enrichment_celltype=CL:0000738!6.47e-44!140;CL:0000037!3.40e-43!172;CL:0000566!3.40e-43!172;CL:0000988!1.84e-39!182;CL:0002032!2.09e-39!165;CL:0000837!2.09e-39!165;CL:0002031!5.91e-35!124;CL:0002087!1.50e-33!119;CL:0000766!3.78e-28!76;CL:0000763!7.08e-28!112;CL:0000049!7.08e-28!112;CL:0000557!4.20e-25!71;CL:0002057!1.43e-24!42;CL:0000839!5.36e-24!70;CL:0002009!6.48e-23!65;CL:0002194!5.18e-22!63;CL:0000576!5.18e-22!63;CL:0000040!5.18e-22!63;CL:0000559!5.18e-22!63;CL:0000860!2.08e-20!45;CL:0000542!2.45e-10!53;CL:0000051!2.45e-10!53;CL:0000838!2.69e-10!52;CL:0000791!4.23e-10!18;CL:0000789!4.23e-10!18;CL:0002420!4.23e-10!18;CL:0002419!4.23e-10!18;CL:0000790!4.23e-10!18;CL:0000084!9.03e-09!25;CL:0000827!9.03e-09!25;CL:0000134!2.07e-08!358;CL:0002320!4.46e-08!365|ontology_enrichment_celltype_v019=CL:0000860;3.34e-18;33!CL:0002057;3.34e-18;33!CL:0000473;9.55e-18;39!CL:0000234;9.55e-18;39!CL:0000576;1.91e-15;48!CL:0000766;4.19e-14;69!CL:0002087;1.20e-10;104!CL:0000738;2.58e-10;136!CL:0000791;3.99e-10;18!CL:0000789;3.99e-10;18!CL:0002419;3.99e-10;18!CL:0000084;6.50e-09;25!CL:0000763;8.11e-09;100!CL:0000988;1.14e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,1.35e-47,136;CL:0000037,2.24e-46,168;CL:0000988,4.12e-43,177;CL:0002032,1.74e-42,161;CL:0000837,1.74e-42,161;CL:0002031,2.17e-38,120;CL:0002087,5.48e-37,115;CL:0000766,2.62e-32,72;CL:0000763,4.82e-31,108;CL:0000049,4.82e-31,108;CL:0000557,3.87e-29,67;CL:0000839,5.99e-28,66;CL:0000473,1.94e-27,48;CL:0000234,1.94e-27,48;CL:0002009,5.95e-27,61;CL:0002194,5.00e-26,59;CL:0000576,5.00e-26,59;CL:0000040,5.00e-26,59;CL:0000559,5.00e-26,59;CL:0000860,1.43e-24,42;CL:0002057,1.43e-24,42;CL:0000542,2.45e-10,53;CL:0000051,2.45e-10,53;CL:0000838,2.69e-10,52;CL:0000791,4.23e-10,18;CL:0000789,4.23e-10,18;CL:0002420,4.23e-10,18;CL:0002419,4.23e-10,18;CL:0000790,4.23e-10,18;CL:0000134,2.21e-09,354;CL:0002320,5.09e-09,361;CL:0000084,9.03e-09,25;CL:0000827,9.03e-09,25;CL:0000219,4.30e-07,386|ontology_enrichment_development_v019=CL:0002057;4.93e-18;42!CL:0000790;3.99e-10;18!CL:0000049;6.65e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.26e-25!102;UBERON:0003061!5.26e-25!102;UBERON:0002193!2.47e-23!112;UBERON:0002371!4.68e-20!80;UBERON:0001474!4.74e-18!86;UBERON:0002405!1.77e-16!115;UBERON:0007023!1.82e-16!115;UBERON:0004765!3.51e-14!101;UBERON:0001434!3.51e-14!101;UBERON:0002384!2.70e-07!375;UBERON:0001049!3.08e-07!57;UBERON:0005068!3.08e-07!57;UBERON:0006241!3.08e-07!57;UBERON:0007135!3.08e-07!57|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.85e-28,98;UBERON:0003061,3.85e-28,98;UBERON:0002193,3.76e-26,108;UBERON:0002371,3.05e-23,76;UBERON:0002405,4.39e-23,93;UBERON:0001474,7.05e-21,82;UBERON:0004765,3.08e-18,90;UBERON:0007023,2.53e-16,114;UBERON:0001434,6.04e-16,100;UBERON:0002384,3.55e-08,371;UBERON:0001049,2.64e-07,56;UBERON:0005068,2.64e-07,56;UBERON:0006241,2.64e-07,56;UBERON:0007135,2.64e-07,56;UBERON:0003081,4.67e-07,203|phase1_expression=6.17706489519893,6.20891519283851,7.04772020479856,6.00439790118782,7.59833860526389,5.23403114460221,2.53299878168311,7.58063848112197,6.7908263331958,4.17747692052565,1.39560233594486,9.39297900159741,7.64924236862515,7.05468211872266,5.63375538737457,6.72325146451775,4.21886169616784,6.57279081348636,3.90346239032406,6.52541607806976,6.5280221198161,9.40364164434263,13.4530913951597,7.39121895393575,8.28581421325698,10.1629829644775,7.7174554082949,10.0749800081509,39.3364276848904,43.372721984985,34.3691793761689,4.59710612239464,6.024118375565,6.28581817283539,7.04951525280745,13.6482463187925,16.7352250420863,73.6813893347397,63.9736787429752,50.5635328767935,30.6764199708696,21.0530882912337,24.4696789252477,36.9311526500094,60.8380269338983,28.8675032813501,50.9019590823449,55.9188327709683,46.7656620051606,52.3600154026314,63.527855219217,40.9114257707252,68.9491361473237,55.511682788209,46.0450054420762,42.3545263970861,48.8502008603544,34.607416604543,55.4011845191334,65.4695215235231,38.3602275479425,35.9537917203521,51.461623666381,31.5406315394194,56.5908015325739,61.8449894913342,36.1236904417433,58.2896903395644,57.8846039446424,51.2565673504075,58.1183522528034,71.0775837456,48.7352076658962,23.2380814943136,39.5443997934981,41.5124118106584,27.5205146308913,33.9399777821804,56.093229757281,28.2162616303836,36.7995852818317,41.8300912121012,24.6394742245852,19.6609900054367,19.5692035849982,31.578036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9,12.3130285093245,4.37431427867373,6.06596470166591,8.27849467280405,2.82318983637806,10.3033679277514,11.593682288866,5.52242770681434,8.64739246434731,5.54805861502613,7.0079111951783,4.27665432979378,6.22867855117575,5.26332157312924,6.35169879805604,5.90661362214566,5.61849569960609,6.8497609880392,9.8956684675993,6.98683305943167,6.22059311761283,7.44356800762386,9.39141111261121,7.21236523186648,5.71207818253193,8.95115613050256,6.36470307208958,6.33722286550682,8.81664143769138,12.7390684383557,4.80033317595784,6.18112269329027,2.69399591012735,8.83294287600557,5.5859750818118,7.93433888087225,4.4369029634086,2.493765180635,1.85217979459067,7.34210113519403,9.13353089515586,4.01441881309264,8.11350983441216,5.65405267026819,2.50788249752189,2.87202149110224,4.61234733458304,2.41801239211839,2.12701969324168,14.2406189236283,20.070611810457,21.1255096098247,19.4642819164455,3.27609848846413,6.63586853635042,3.80361822045529,5.19967229222818,10.5624812397199,7.92188906439752,4.54012762853469,11.7827808161178,6.43445735509445,7.46492712039567,6.90629605039719,3.01909471910709,8.4923608602184,9.71965779908924,7.12876625806906,9.35329648447405,10.6584757262742,6.14509409770568,6.36008701306837,22.0024268553497,8.80627823114017,7.75887076119505,4.2874366829448,12.5889281189061,15.5866233958143,18.3578937915724,9.23023639083397,11.8473697224208,9.47454358759785,10.1729656748066,34.2646608621971,2.55184068102667,2.94924308369351,2.20114318226015,4.85207797831421,6.86487771840901,4.1421595563606,4.77398933079059,18.5769511022665,4.43751151147744,15.6302802246619,8.1191075289241,3.11166643269184,6.2099556211159,10.7384759543248,10.9350933805939,11.7811474005675,11.0343509737398,10.9394961803644,10.9651553371436,18.3598136004039,10.3764034172176,3.83287282918786,18.74956425574,16.1416186665036,17.6020025228623,19.8066106475629,8.95893938642652,7.83591115379299,5.14464028312255,13.9337952602505,12.5625997505042,5.2005289988946,7.11880972109242,16.954508055711,15.8686745815162,4.20408244970683,38.3526662613988,3.23891386827932,11.9437921971763,18.2265187650474,10.7449255978254,7.43945122356002,3.82488199065675,7.21540228257228,8.91029505901058,9.04807928597935,12.4426739126537,18.4997764292719,5.32494003287544,4.17545683319873,21.1693525095465,7.7896335304977,10.5470171125869,7.64431151181946,4.3623618401139,3.63155864376399,4.99863492427305,20.7177227900126,8.5210129690685,18.5570309014112,22.8284166737796,8.1878812211737,15.3192096874254,8.56224653598494,10.8428238757402,9.23500340661605,7.397179334767,11.4989495580838,12.6764545092295,13.6392015944842,19.8570140620663,2.82811856521951,18.8456128430347,15.1493664166814,24.5140321998372,7.64672016095176,14.2855555329377,21.4644766952012,11.5931740872918,1.42843150884526,2.11736923029415,15.8075492377661,18.2584097061629,14.6793370689453,14.7639770645995,11.3595524779093,11.2865873716918,11.3451179488498,27.5093957068008,5.20793025433452,6.00828317220844,3.8936390591141,8.20081761428013,5.46327859818478,4.94124153944604,4.38551967890521,16.5674791264648,28.3036290567322,7.52122617877125,10.3059029576806,14.4700630284336,16.5833887891756,16.4458463420413,19.6175263348902,22.1399921261279,22.2185849835861,34.513541148497,2.91542842709595,9.73801521655923,25.0625314308192,12.4098546301268,8.55583252713203,22.3608816008431,11.977608300577,15.6350367576626,4.55858304221457,4.26909383510862,7.7228912914776,3.95230889268982,25.81050366438,32.027258375911,17.089639489261,20.6384599997509,24.7566766116962,5.44966436915496|short_description=p1@ATP9B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=374868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13541 | |||
|TSSclassifier=S | |||
|UniProt=O43861,A6NH10,F2Z2D8,F5H3M8,B3KSI8,Q69YZ7,Q7Z3J4,Q7Z6L4 | |||
|association_with_transcript=0bp_to_ENST00000307671,ENST00000359184,ENST00000426216,ENST00000490210,ENST00000542323,NM_198531,uc002lmu.2,uc002lmv.1,uc002lmw.1,uc002lmx.2_5end | |||
|coexpression_cluster_id=C723 | |||
|description=CAGE_peak_1_at_ATP9B_5end | |||
|id=chr18:76829385..76829438,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.47e-44!140;CL:0000037!3.40e-43!172;CL:0000566!3.40e-43!172;CL:0000988!1.84e-39!182;CL:0002032!2.09e-39!165;CL:0000837!2.09e-39!165;CL:0002031!5.91e-35!124;CL:0002087!1.50e-33!119;CL:0000766!3.78e-28!76;CL:0000763!7.08e-28!112;CL:0000049!7.08e-28!112;CL:0000557!4.20e-25!71;CL:0002057!1.43e-24!42;CL:0000839!5.36e-24!70;CL:0002009!6.48e-23!65;CL:0002194!5.18e-22!63;CL:0000576!5.18e-22!63;CL:0000040!5.18e-22!63;CL:0000559!5.18e-22!63;CL:0000860!2.08e-20!45;CL:0000542!2.45e-10!53;CL:0000051!2.45e-10!53;CL:0000838!2.69e-10!52;CL:0000791!4.23e-10!18;CL:0000789!4.23e-10!18;CL:0002420!4.23e-10!18;CL:0002419!4.23e-10!18;CL:0000790!4.23e-10!18;CL:0000084!9.03e-09!25;CL:0000827!9.03e-09!25;CL:0000134!2.07e-08!358;CL:0002320!4.46e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.34e-18;33!CL:0002057;3.34e-18;33!CL:0000473;9.55e-18;39!CL:0000234;9.55e-18;39!CL:0000576;1.91e-15;48!CL:0000766;4.19e-14;69!CL:0002087;1.20e-10;104!CL:0000738;2.58e-10;136!CL:0000791;3.99e-10;18!CL:0000789;3.99e-10;18!CL:0002419;3.99e-10;18!CL:0000084;6.50e-09;25!CL:0000763;8.11e-09;100!CL:0000988;1.14e-07;177 | |||
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|ontology_enrichment_disease= | |||
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| |||
|short_description=p1@ATP9B | |||
}} |
Revision as of 18:21, 11 September 2013
Short description: | p1@ATP9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ATP9B_5end |
Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 0bp_to_ENST00000307671, ENST00000359184, ENST00000426216, ENST00000490210, ENST00000542323, NM_198531, uc002lmu.2, uc002lmv.1, uc002lmw.1, uc002lmx.2_5end |
EntrezGene: | ATP9B |
HGNC: | 13541 |
UniProt: | O43861A6NH10F2Z2D8F5H3M8B3KSI8Q69YZ7Q7Z3J4Q7Z6L4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.85e-28 | 98 |
blood island | 3.85e-28 | 98 |
hemolymphoid system | 3.76e-26 | 108 |
bone marrow | 3.05e-23 | 76 |
immune system | 4.39e-23 | 93 |
bone element | 7.05e-21 | 82 |
skeletal element | 3.08e-18 | 90 |
adult organism | 2.53e-16 | 114 |
skeletal system | 6.04e-16 | 100 |
connective tissue | 3.55e-08 | 371 |
neural tube | 2.64e-07 | 56 |
neural rod | 2.64e-07 | 56 |
future spinal cord | 2.64e-07 | 56 |
neural keel | 2.64e-07 | 56 |
lateral plate mesoderm | 4.67e-07 | 203 |
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