FFCP PHASE1:Hg19::chr19:15752088..15752159,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4051|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2646|TSSclassifier=S|UniProt=|association_with_transcript=-36bp_to_uc002nbk.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_CYP4F3_5end|id=chr19:15752088..15752159,+|ontology_enrichment_celltype=CL:0000181!5.35e-08!12;CL:0000417!5.35e-08!12;CL:0000668!5.35e-08!12;CL:0000414!5.35e-08!12;CL:0000412!5.35e-08!12;CL:0000182!5.35e-08!12|ontology_enrichment_celltype_v019=CL:0000182;6.09e-12;12|ontology_enrichment_celltype_v019_2=CL:0000182,6.14e-12,12|ontology_enrichment_development_v019=UBERON:0009497;4.93e-14;13!UBERON:0004161;5.00e-13;11!UBERON:0006241;1.10e-08;3!UBERON:0003057;1.10e-08;3!UBERON:0006601;1.85e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.75e-47!57;UBERON:0005068!5.75e-47!57;UBERON:0006241!5.75e-47!57;UBERON:0007135!5.75e-47!57;UBERON:0007023!1.78e-46!115;UBERON:0002780!9.59e-39!41;UBERON:0001890!9.59e-39!41;UBERON:0006240!9.59e-39!41;UBERON:0002616!7.44e-38!59;UBERON:0003080!1.34e-37!42;UBERON:0001893!5.80e-36!34;UBERON:0002791!1.88e-34!33;UBERON:0000955!4.33e-34!69;UBERON:0006238!4.33e-34!69;UBERON:0001017!1.68e-33!82;UBERON:0002020!6.20e-33!34;UBERON:0003528!6.20e-33!34;UBERON:0001869!7.29e-33!32;UBERON:0005743!2.42e-31!86;UBERON:0003075!7.84e-30!86;UBERON:0007284!7.84e-30!86;UBERON:0002346!2.45e-29!90;UBERON:0000073!3.75e-27!94;UBERON:0001016!3.75e-27!94;UBERON:0002619!3.21e-26!22;UBERON:0001950!2.95e-23!20;UBERON:0003056!6.01e-23!61;UBERON:0000956!1.65e-22!25;UBERON:0000203!1.65e-22!25;UBERON:0000025!4.91e-20!194;UBERON:0000153!1.95e-18!129;UBERON:0007811!1.95e-18!129;UBERON:0000033!5.15e-18!123;UBERON:0004111!8.41e-16!241;UBERON:0000481!1.74e-15!347;UBERON:0002420!5.21e-15!9;UBERON:0007245!5.21e-15!9;UBERON:0010009!5.21e-15!9;UBERON:0010011!5.21e-15!9;UBERON:0000454!5.21e-15!9;UBERON:0000477!1.09e-13!286;UBERON:0000924!1.98e-13!173;UBERON:0006601!1.98e-13!173;UBERON:0004121!2.48e-13!169;UBERON:0009497!6.12e-13!25;UBERON:0000015!6.12e-13!25;UBERON:0002423!6.12e-13!25;UBERON:0006235!6.12e-13!25;UBERON:0004161!6.12e-13!25;UBERON:0000062!7.23e-13!511;UBERON:0000475!2.05e-12!365;UBERON:0009663!3.22e-12!7;UBERON:0002308!5.32e-12!9;UBERON:0000125!5.32e-12!9;UBERON:0000483!1.84e-11!309;UBERON:0000119!3.49e-11!312;UBERON:0003076!2.12e-10!15;UBERON:0003057!2.12e-10!15;UBERON:0000200!3.56e-10!6;UBERON:0001871!5.11e-10!7;UBERON:0004921!1.91e-09!129;UBERON:0004185!1.91e-09!129;UBERON:0008835!2.41e-09!22;UBERON:0003894!2.41e-09!22;UBERON:0003929!4.77e-09!54;UBERON:0000349!5.72e-09!5;UBERON:0009854!8.14e-09!23;UBERON:0001007!9.30e-09!155;UBERON:0001555!9.30e-09!155;UBERON:0007026!9.30e-09!155;UBERON:0000064!1.42e-08!219;UBERON:0005057!1.80e-08!26;UBERON:0000923!2.00e-08!604;UBERON:0005291!2.00e-08!604;UBERON:0006598!2.00e-08!604;UBERON:0002532!2.00e-08!604;UBERON:0002050!2.27e-08!605;UBERON:0005423!2.27e-08!605;UBERON:0005409!3.48e-08!35;UBERON:0000922!5.42e-08!612;UBERON:0007499!6.89e-08!25;UBERON:0000467!7.71e-08!625;UBERON:0002298!8.38e-08!8;UBERON:0000480!8.70e-08!626;UBERON:0002107!1.19e-07!19;UBERON:0006925!1.19e-07!19;UBERON:0008836!1.19e-07!19;UBERON:0000369!1.27e-07!4;UBERON:0002435!1.27e-07!4;UBERON:0000204!1.27e-07!4;UBERON:0010082!1.27e-07!4;UBERON:0009856!1.77e-07!26;UBERON:0000160!2.74e-07!27;UBERON:0004119!3.11e-07!169;UBERON:0000925!3.11e-07!169;UBERON:0006595!3.11e-07!169;UBERON:0002365!9.18e-07!31;UBERON:0002330!9.18e-07!31|ontology_enrichment_uberon_v019=UBERON:0002780;2.79e-22;41!UBERON:0001890;2.79e-22;41!UBERON:0001869;1.20e-20;32!UBERON:0001893;2.72e-20;34!UBERON:0002791;1.28e-18;32!UBERON:0003528;8.40e-18;34!UBERON:0002020;8.40e-18;34!UBERON:0002619;6.83e-17;22!UBERON:0000073;1.10e-16;53!UBERON:0002616;1.10e-16;53!UBERON:0002423;2.68e-15;25!UBERON:0000956;1.34e-14;25!UBERON:0000203;1.34e-14;25!UBERON:0001950;2.24e-13;20!UBERON:0001017;9.55e-13;75!UBERON:0002107;7.57e-12;19!UBERON:0006925;7.57e-12;19!UBERON:0000955;1.08e-11;68!UBERON:0007023;1.37e-10;114!UBERON:0001016;3.78e-10;83!UBERON:0001896;4.63e-09;3!UBERON:0005290;4.63e-09;3!UBERON:0002240;1.10e-08;3!UBERON:0005174;1.10e-08;3!UBERON:0001137;1.10e-08;3!UBERON:0000349;1.74e-08;5!UBERON:0002365;1.19e-07;31!UBERON:0002330;1.19e-07;31!UBERON:0002298;1.65e-07;6!UBERON:0002420;1.79e-07;9!UBERON:0000125;1.79e-07;9!UBERON:0007245;1.79e-07;9!UBERON:0002308;1.79e-07;9!UBERON:0010009;1.79e-07;9!UBERON:0010011;1.79e-07;9!UBERON:0000454;1.79e-07;9!UBERON:0000160;3.25e-07;17!UBERON:0011216;4.79e-07;132!UBERON:0005409;6.30e-07;22!UBERON:0002784;8.36e-07;4!UBERON:0001897;9.50e-07;2!UBERON:0010225;9.50e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.83e-38,56;UBERON:0005068,4.83e-38,56;UBERON:0006241,4.83e-38,56;UBERON:0007135,4.83e-38,56;UBERON:0000073,1.83e-32,53;UBERON:0002616,1.83e-32,53;UBERON:0007023,2.64e-32,114;UBERON:0002780,1.03e-28,41;UBERON:0001890,1.03e-28,41;UBERON:0003080,1.03e-28,41;UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2646 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-36bp_to_uc002nbk.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CYP4F3_5end | |||
|id=chr19:15752088..15752159,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.35e-08!12;CL:0000417!5.35e-08!12;CL:0000668!5.35e-08!12;CL:0000414!5.35e-08!12;CL:0000412!5.35e-08!12;CL:0000182!5.35e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.09e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.14e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.93e-14;13!UBERON:0004161;5.00e-13;11!UBERON:0006241;1.10e-08;3!UBERON:0003057;1.10e-08;3!UBERON:0006601;1.85e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@CYP4F3 | |||
}} |
Revision as of 19:10, 11 September 2013
Short description: | p1@CYP4F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CYP4F3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -36bp_to_uc002nbk.2_5end |
EntrezGene: | CYP4F3 |
HGNC: | 2646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.14e-12 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.