FFCP PHASE1:Hg19::chr19:50270219..50270319,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=561 | |||
|TSSclassifier=S | |||
|UniProt=O95782 | |||
|association_with_transcript=39bp_to_ENST00000354293,ENST00000359032,NM_014203,NM_130787,uc002ppn.2,uc002ppo.2,uc010enj.1_5end | |||
|coexpression_cluster_id=C1060 | |||
|description=CAGE_peak_1_at_AP2A1_5end | |||
|id=chr19:50270219..50270319,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.86e-25!180;CL:0000183!5.03e-18!59;CL:0000222!9.61e-18!119;CL:0000680!1.13e-16!57;CL:0000056!1.13e-16!57;CL:0000355!1.13e-16!57;CL:0000187!6.45e-16!54;CL:0000192!5.21e-14!42;CL:0000514!5.21e-14!42;CL:0000393!5.48e-14!60;CL:0000211!5.48e-14!60;CL:0000220!6.18e-12!246;CL:0000359!6.95e-12!32;CL:0002321!1.55e-11!248;CL:0000057!2.09e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.19e-11;32!CL:0000192;1.40e-10;43!CL:0000187;3.76e-09;55!CL:0000393;2.14e-07;61!CL:0000211;2.14e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.99e-18,121;CL:0000680,7.46e-17,58;CL:0000056,7.46e-17,58;CL:0000355,7.46e-17,58;CL:0000187,4.30e-16,55;CL:0000192,3.56e-14,43;CL:0000514,3.56e-14,43;CL:0000393,3.58e-14,61;CL:0000211,3.58e-14,61;CL:0000359,6.95e-12,32;CL:0002321,7.48e-12,250;CL:0000057,1.41e-10,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.40e-10;43!CL:0000355;4.84e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
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| |||
|short_description=p1@AP2A1 | |||
}} |
Revision as of 21:50, 11 September 2013
Short description: | p1@AP2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AP2A1_5end |
Coexpression cluster: | C1060_Mesenchymal_Pericytes_Fibroblast_occipital_Renal_temporal_Nucleus |
Association with transcript: | 39bp_to_ENST00000354293, ENST00000359032, NM_014203, NM_130787, uc002ppn.2, uc002ppo.2, uc010enj.1_5end |
EntrezGene: | AP2A1 |
HGNC: | 561 |
UniProt: | O95782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.99e-18 | 121 |
muscle precursor cell | 7.46e-17 | 58 |
myoblast | 7.46e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.46e-17 | 58 |
muscle cell | 4.30e-16 | 55 |
smooth muscle cell | 3.56e-14 | 43 |
smooth muscle myoblast | 3.56e-14 | 43 |
electrically responsive cell | 3.58e-14 | 61 |
electrically active cell | 3.58e-14 | 61 |
vascular associated smooth muscle cell | 6.95e-12 | 32 |
embryonic cell | 7.48e-12 | 250 |
fibroblast | 1.41e-10 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.