FFCP PHASE1:Hg19::chr19:6071270..6071281,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:6071270..6071281,+|id=chr19:6071270..6071281,+|ontology_enrichment_celltype=CL:0002620!7.94e-08!23;CL:0000057!3.75e-07!75;CL:0000569!5.05e-07!4;CL:0000011!5.05e-07!4|ontology_enrichment_celltype_v019=CL:0002561;6.00e-22;2!CL:0002581;5.04e-12;1!CL:0002591;1.07e-11;1!CL:1000306;1.40e-11;4!CL:0002547;1.40e-11;4!CL:0000569;1.82e-11;4!CL:0002559;2.36e-09;5|ontology_enrichment_celltype_v019_2=CL:0002561,3.93e-22,2;CL:0002581,4.53e-12,1;CL:1000306,1.26e-11,4;CL:0002547,1.26e-11,4;CL:0002591,1.47e-11,1;CL:0000569,1.47e-11,4;CL:0000011,1.47e-11,4;CL:0002559,2.00e-09,5|ontology_enrichment_development_v019=UBERON:0006242;1.07e-11;1!UBERON:0010115;1.07e-11;1!CL:0000011;1.82e-11;4|ontology_enrichment_disease=DOID:2394!4.22e-18!14;DOID:120!2.54e-08!27;DOID:193!1.33e-07!29|ontology_enrichment_disease_v019=DOID:2394;2.04e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,2.06e-07,14|ontology_enrichment_uberon=UBERON:0000992!4.03e-12!13;UBERON:0002119!1.80e-11!4;UBERON:0004531!1.80e-11!4;UBERON:0000991!1.11e-08!21;UBERON:0009196!1.11e-08!21;UBERON:0009117!1.11e-08!21;UBERON:0005564!1.11e-08!21;UBERON:0004176!3.31e-08!22|ontology_enrichment_uberon_v019=UBERON:0005933;6.00e-22;2!UBERON:0005942;6.00e-22;2!UBERON:0005932;6.00e-22;2!UBERON:0002363;1.07e-11;1!UBERON:0007195;1.07e-11;1!UBERON:0004797;1.40e-11;4!UBERON:0000415;1.40e-11;4!UBERON:0007240;1.40e-11;4!UBERON:0005742;1.40e-11;4!UBERON:0005734;1.40e-11;4!UBERON:0004664;1.40e-11;4!UBERON:0004663;1.40e-11;4!UBERON:0002073;2.36e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0005933,3.93e-22,2;UBERON:0005942,3.93e-22,2;UBERON:0005932,3.93e-22,2;UBERON:0000415,1.26e-11,4;UBERON:0007240,1.26e-11,4;UBERON:0005742,1.26e-11,4;UBERON:0005734,1.26e-11,4;UBERON:0004664,1.26e-11,4;UBERON:0004663,1.26e-11,4;UBERON:0007195,1.63e-11,1;UBERON:0002363,1.81e-11,1;UBERON:0007645,1.81e-11,1;UBERON:0007647,1.81e-11,1;UBERON:0010115,1.81e-11,1;UBERON:0002073,2.00e-09,5;UBERON:0005086,2.00e-09,5;UBERON:0004797,5.19e-07,7|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36950296683622,1.43418310374407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0.900273288253207,0.103052529238439,3.60696756063881,0,1.85653965465393,0.292311015483596,0,0.0920498986422993,0.161646056818812,4.26011511019937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.623912584592421,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84154367945675,0,0,0,0.160853921143607,2.96836132889982,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,1.25783950876288,0,2.05956061557231,1.96600200892211,0,0.295710299979268,0.955780602982214,0.449803112163605,1.39736661188633,0.414706207840855,0.53168342911599,0,4.0569554429249,0.761610424337591,0,0.727394636810238,0.107410557042488,3.71227007902795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr19:6071270..6071281,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:6071270..6071281,+ | |||
|id=chr19:6071270..6071281,+ | |||
|ontology_enrichment_celltype=CL:0002620!7.94e-08!23;CL:0000057!3.75e-07!75;CL:0000569!5.05e-07!4;CL:0000011!5.05e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002561;6.00e-22;2!CL:0002581;5.04e-12;1!CL:0002591;1.07e-11;1!CL:1000306;1.40e-11;4!CL:0002547;1.40e-11;4!CL:0000569;1.82e-11;4!CL:0002559;2.36e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,3.93e-22,2;CL:0002581,4.53e-12,1;CL:1000306,1.26e-11,4;CL:0002547,1.26e-11,4;CL:0002591,1.47e-11,1;CL:0000569,1.47e-11,4;CL:0000011,1.47e-11,4;CL:0002559,2.00e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.07e-11;1!UBERON:0010115;1.07e-11;1!CL:0000011;1.82e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!4.22e-18!14;DOID:120!2.54e-08!27;DOID:193!1.33e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.06e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000992!4.03e-12!13;UBERON:0002119!1.80e-11!4;UBERON:0004531!1.80e-11!4;UBERON:0000991!1.11e-08!21;UBERON:0009196!1.11e-08!21;UBERON:0009117!1.11e-08!21;UBERON:0005564!1.11e-08!21;UBERON:0004176!3.31e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;6.00e-22;2!UBERON:0005942;6.00e-22;2!UBERON:0005932;6.00e-22;2!UBERON:0002363;1.07e-11;1!UBERON:0007195;1.07e-11;1!UBERON:0004797;1.40e-11;4!UBERON:0000415;1.40e-11;4!UBERON:0007240;1.40e-11;4!UBERON:0005742;1.40e-11;4!UBERON:0005734;1.40e-11;4!UBERON:0004664;1.40e-11;4!UBERON:0004663;1.40e-11;4!UBERON:0002073;2.36e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,3.93e-22,2;UBERON:0005942,3.93e-22,2;UBERON:0005932,3.93e-22,2;UBERON:0000415,1.26e-11,4;UBERON:0007240,1.26e-11,4;UBERON:0005742,1.26e-11,4;UBERON:0005734,1.26e-11,4;UBERON:0004664,1.26e-11,4;UBERON:0004663,1.26e-11,4;UBERON:0007195,1.63e-11,1;UBERON:0002363,1.81e-11,1;UBERON:0007645,1.81e-11,1;UBERON:0007647,1.81e-11,1;UBERON:0010115,1.81e-11,1;UBERON:0002073,2.00e-09,5;UBERON:0005086,2.00e-09,5;UBERON:0004797,5.19e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36950296683622,1.43418310374407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0.900273288253207,0.103052529238439,3.60696756063881,0,1.85653965465393,0.292311015483596,0,0.0920498986422993,0.161646056818812,4.26011511019937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,0.623912584592421,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84154367945675,0,0,0,0.160853921143607,2.96836132889982,0,0,0.164254312027618,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,1.25783950876288,0,2.05956061557231,1.96600200892211,0,0.295710299979268,0.955780602982214,0.449803112163605,1.39736661188633,0.414706207840855,0.53168342911599,0,4.0569554429249,0.761610424337591,0,0.727394636810238,0.107410557042488,3.71227007902795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr19:6071270..6071281,+ | |||
}} |
Revision as of 22:42, 11 September 2013
Short description: | p@chr19:6071270..6071281, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6071270..6071281, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 3.93e-22 | 2 |
perirenal preadipocyte | 4.53e-12 | 1 |
fibroblast of tunica adventitia of artery | 1.26e-11 | 4 |
fibroblast of the aortic adventitia | 1.26e-11 | 4 |
smooth muscle cell of the pulmonary artery | 1.47e-11 | 1 |
cardiac mesenchymal cell | 1.47e-11 | 4 |
migratory trunk neural crest cell | 1.47e-11 | 4 |
hair follicle cell | 2.00e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 3.93e-22 | 2 |
hair outer root sheath | 3.93e-22 | 2 |
bulb of hair follicle | 3.93e-22 | 2 |
artery wall | 1.26e-11 | 4 |
tunica adventitia of artery | 1.26e-11 | 4 |
adventitia | 1.26e-11 | 4 |
tunica adventitia of blood vessel | 1.26e-11 | 4 |
aorta tunica adventitia | 1.26e-11 | 4 |
aorta wall | 1.26e-11 | 4 |
stroma of bone marrow | 1.63e-11 | 1 |
dura mater | 1.81e-11 | 1 |
future meninx | 1.81e-11 | 1 |
ectomeninx | 1.81e-11 | 1 |
future dura mater | 1.81e-11 | 1 |
hair follicle | 2.00e-09 | 5 |
hair follicle placode | 2.00e-09 | 5 |
blood vessel layer | 5.19e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.06e-07 | 14 |
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