FFCP PHASE1:Hg19::chr19:7754019..7754029,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1830|description=CAGE_peak_at_chr19:7754019..7754029,-|id=chr19:7754019..7754029,-|ontology_enrichment_celltype=CL:0000945!8.76e-59!24;CL:0000826!8.76e-59!24;CL:0000838!9.12e-30!52;CL:0000542!3.75e-29!53;CL:0000051!3.75e-29!53;CL:0002087!3.40e-26!119;CL:0000236!1.49e-25!14;CL:0002031!1.40e-22!124;CL:0000738!1.03e-21!140;CL:0000037!7.99e-19!172;CL:0000566!7.99e-19!172;CL:0002032!6.84e-18!165;CL:0000837!6.84e-18!165;CL:0000988!1.42e-17!182;CL:0000785!2.41e-15!2;CL:0000955!2.41e-15!2;CL:0000818!2.41e-15!2;CL:0000954!2.41e-15!2;CL:0000816!2.41e-15!2;CL:0000817!1.53e-10!3;CL:0000946!1.42e-08!1;CL:0000786!1.42e-08!1;CL:0000980!1.42e-08!1;CL:0000819!1.78e-08!1;CL:0000134!6.57e-07!358|ontology_enrichment_celltype_v019=CL:0000945;1.68e-49;24!CL:0000542;9.45e-12;53!CL:0000236;3.56e-11;13|ontology_enrichment_celltype_v019_2=CL:0000945,1.68e-49,24;CL:0000826,1.68e-49,24;CL:0000838,3.32e-23,52;CL:0000542,8.88e-23,53;CL:0000051,8.88e-23,53;CL:0002087,1.15e-10,115;CL:0000236,1.81e-10,14;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177|ontology_enrichment_development_v019=CL:0000051;9.45e-12;53|ontology_enrichment_disease=DOID:0060058!3.48e-18!10;DOID:630!3.87e-09!1;DOID:0050177!3.87e-09!1;DOID:0050427!3.87e-09!1;DOID:2355!9.02e-09!1;DOID:0060073!1.78e-08!1;DOID:8675!1.78e-08!1|ontology_enrichment_disease_v019=DOID:630;4.27e-34;1!DOID:0050177;4.27e-34;1!DOID:0050427;4.27e-34;1|ontology_enrichment_disease_v019_2=DOID:630,5.05e-34,1;DOID:0050177,5.05e-34,1;DOID:0050427,5.05e-34,1|ontology_enrichment_uberon=UBERON:0002372!2.22e-08!1;UBERON:0001961!2.22e-08!1;UBERON:0001744!2.22e-08!1;UBERON:0001735!2.22e-08!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.06730766284929,1.41679406364623,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0.569212969109448,1.17447437874188,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,1.28227396921293|short_description=p@chr19:7754019..7754029,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1830 | |||
|description=CAGE_peak_at_chr19:7754019..7754029,- | |||
|id=chr19:7754019..7754029,- | |||
|ontology_enrichment_celltype=CL:0000945!8.76e-59!24;CL:0000826!8.76e-59!24;CL:0000838!9.12e-30!52;CL:0000542!3.75e-29!53;CL:0000051!3.75e-29!53;CL:0002087!3.40e-26!119;CL:0000236!1.49e-25!14;CL:0002031!1.40e-22!124;CL:0000738!1.03e-21!140;CL:0000037!7.99e-19!172;CL:0000566!7.99e-19!172;CL:0002032!6.84e-18!165;CL:0000837!6.84e-18!165;CL:0000988!1.42e-17!182;CL:0000785!2.41e-15!2;CL:0000955!2.41e-15!2;CL:0000818!2.41e-15!2;CL:0000954!2.41e-15!2;CL:0000816!2.41e-15!2;CL:0000817!1.53e-10!3;CL:0000946!1.42e-08!1;CL:0000786!1.42e-08!1;CL:0000980!1.42e-08!1;CL:0000819!1.78e-08!1;CL:0000134!6.57e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.68e-49;24!CL:0000542;9.45e-12;53!CL:0000236;3.56e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.68e-49,24;CL:0000826,1.68e-49,24;CL:0000838,3.32e-23,52;CL:0000542,8.88e-23,53;CL:0000051,8.88e-23,53;CL:0002087,1.15e-10,115;CL:0000236,1.81e-10,14;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;9.45e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.48e-18!10;DOID:630!3.87e-09!1;DOID:0050177!3.87e-09!1;DOID:0050427!3.87e-09!1;DOID:2355!9.02e-09!1;DOID:0060073!1.78e-08!1;DOID:8675!1.78e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:630;4.27e-34;1!DOID:0050177;4.27e-34;1!DOID:0050427;4.27e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.05e-34,1;DOID:0050177,5.05e-34,1;DOID:0050427,5.05e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.22e-08!1;UBERON:0001961!2.22e-08!1;UBERON:0001744!2.22e-08!1;UBERON:0001735!2.22e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.06730766284929,1.41679406364623,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0.569212969109448,1.17447437874188,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,1.28227396921293 | |||
|short_description=p@chr19:7754019..7754029,- | |||
}} |
Revision as of 22:56, 11 September 2013
Short description: | p@chr19:7754019..7754029, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7754019..7754029, - |
Coexpression cluster: | C1830_CD19_xeroderma_b_lymphoma_hereditary_B_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.68e-49 | 24 |
pro-B cell | 1.68e-49 | 24 |
lymphoid lineage restricted progenitor cell | 3.32e-23 | 52 |
lymphocyte | 8.88e-23 | 53 |
common lymphoid progenitor | 8.88e-23 | 53 |
nongranular leukocyte | 1.15e-10 | 115 |
B cell | 1.81e-10 | 14 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.05e-34 | 1 |
monogenic disease | 5.05e-34 | 1 |
xeroderma pigmentosum | 5.05e-34 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.