FFCP PHASE1:Hg19::chr1:109241930..109241941,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55119|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=25512|TSSclassifier=N|UniProt=Q5VTL8|association_with_transcript=-262bp_to_AY211915_5end|description=CAGE_peak_7_at_PRPF38B_5end|id=chr1:109241930..109241941,+|ontology_enrichment_celltype=CL:0000037!2.58e-14!172;CL:0000566!2.58e-14!172;CL:0002032!3.30e-14!165;CL:0000837!3.30e-14!165;CL:0002087!4.17e-12!119;CL:0000988!7.28e-12!182;CL:0002031!2.10e-09!124;CL:0000738!1.36e-08!140;CL:0000542!2.61e-08!53;CL:0000051!2.61e-08!53;CL:0000838!6.10e-08!52;CL:0000763!4.81e-07!112;CL:0000049!4.81e-07!112|ontology_enrichment_celltype_v019=CL:0000542;1.96e-07;53|ontology_enrichment_celltype_v019_2=CL:0002032,3.92e-15,161;CL:0000837,3.92e-15,161;CL:0000037,3.83e-14,168;CL:0000542,6.89e-13,53;CL:0000051,6.89e-13,53;CL:0000988,2.30e-12,177;CL:0000838,2.97e-12,52;CL:0002087,3.64e-11,115;CL:0002031,5.58e-09,120;CL:0000738,7.03e-08,136|ontology_enrichment_development_v019=CL:0000051;1.96e-07;53|ontology_enrichment_disease=DOID:162!1.82e-18!235;DOID:14566!8.99e-18!239;DOID:2531!4.53e-13!51;DOID:0060083!4.53e-13!51;DOID:1240!7.32e-13!39;DOID:8692!1.15e-09!31;DOID:0050686!2.46e-09!137;DOID:0050687!2.09e-08!143|ontology_enrichment_disease_v019=DOID:1240;7.87e-13;39!DOID:8692;6.13e-11;31!DOID:2531;1.20e-10;51!DOID:0060083;1.20e-10;51|ontology_enrichment_disease_v019_2=DOID:1240,1.59e-16,39;DOID:2531,1.55e-15,51;DOID:0060083,1.55e-15,51;DOID:8692,2.78e-11,31;DOID:162,7.64e-09,235;DOID:14566,3.07e-08,239|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0,0,0.672325146451775,0,1.46062018077475,0.975865597581014,0,0,0,0,1.36874425072884,0.251085279189606,1.52826811495903,1.47781061009902,1.81034797021462,0.393364276848904,0,0.464448369948228,0,0,0,1.23947520928483,1.84820002233648,0.587200878669695,0,5.81578897663411,2.17010870715852,0.223915474239924,0,0.77272670290256,1.45398238779565,0.755751887377619,0.727752183563449,0.929716147622738,1.6446715520873,1.54853185447552,0.575384784644301,0.256160706529101,0.709446689665756,1.03423704220986,0.645484683583826,2.70852973188684,1.69418105588344,1.09162460023138,0.449446968890169,1.22433556948361,0,0.639337125799041,0.659702600373432,0.797854630486527,0,1.45104619314292,1.13477044938228,0.622822248995575,1.50749199154046,1.0429658368404,0.65156653411535,3.02699751316684,0,0.632924774881769,0,1.06302149982522,0.628975936525128,0.561643155732475,0.450530678524519,0.48217676009124,0.570025487482497,0.99458338599545,0.91332076882317,0,0.546138611262131,0,1.70692089026603,0,1.72425731986345,0,0,2.27685187643779,1.17447437874188,1.91136614062614,0,1.12101712596307,0,1.7703879310245,4.71612915298998,2.46721798799411,0.167186495390678,2.28145586643513,0.946895611469467,0,0.557052284425868,1.47302953737419,1.32920336750173,2.16643091012012,1.92136979588513,1.43065282315866,1.80881695064044,1.10540007114339,0.869409257205157,1.77943875794473,0.267540828089713,0,1.0197840842781,0.383220493601921,1.03088233644789,1.26509846009751,0.318565414324097,0,2.85135613334512,0.150575119077773,0.255973222308837,0,0,0.821127996921047,1.41124720257313,2.94184215361858,3.76543450095277,0,0,0.12786256184353,0.361439152384566,0,1.30361867064741,0,0,0.378139268656271,0.443458794925128,0.87834785693126,0.196468613246569,0,0,0,0.348259474598534,0.531831842075461,1.19245312152671,0.571994910780128,0,0,0,0.347140501607594,0,0.419499436209906,0.825354125820202,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.898117490504679,0.337834441449967,0,0,0.183201743930407,2.63560834872127,0,0,0.993943903390637,0.759783069987479,0.794455084879313,0.286836620748814,0.709336764396714,0,0,0.74000264525148,0,0.404132016209064,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0.896692083310806,0.23486899728753,0.485618833104395,0,0.408308342509787,1.96534907698829,0.206651562351531,0,0.741800787835671,0,0,0.168336113954066,0.750711119231785,0,0.438977620880838,0,0.300476117813194,0.567160915800105,0.717558542755448,0,0,1.20036438433761,0.103052529238439,0.772921620136887,0.37223371266318,0.506328996723799,0,0.504867548488229,0.184099797284599,0.323292113637624,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0.286804595389004,1.70763188581434,0.927708378250397,0.929551542956147,0.829288440122964,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.709840800239063,0.505754070234305,0.482022059766964,0.441175890929576,0.217879444092406,0.71181185733329,1.21348177344148,0.588664395376038,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0.441463099414651,0.122988438543114,0.686271241194102,0.109750285408626,0,1.80952150340936,0.833296006426766,0.325808305310325,0,0,0.34779121492523,0,0,0.462985512576611,2.09279567458058,0,0,0.246217006087397,0.468008530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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25512 | |||
|TSSclassifier=N | |||
|UniProt=Q5VTL8 | |||
|association_with_transcript=-262bp_to_AY211915_5end | |||
|description=CAGE_peak_7_at_PRPF38B_5end | |||
|id=chr1:109241930..109241941,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.58e-14!172;CL:0000566!2.58e-14!172;CL:0002032!3.30e-14!165;CL:0000837!3.30e-14!165;CL:0002087!4.17e-12!119;CL:0000988!7.28e-12!182;CL:0002031!2.10e-09!124;CL:0000738!1.36e-08!140;CL:0000542!2.61e-08!53;CL:0000051!2.61e-08!53;CL:0000838!6.10e-08!52;CL:0000763!4.81e-07!112;CL:0000049!4.81e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.96e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.92e-15,161;CL:0000837,3.92e-15,161;CL:0000037,3.83e-14,168;CL:0000542,6.89e-13,53;CL:0000051,6.89e-13,53;CL:0000988,2.30e-12,177;CL:0000838,2.97e-12,52;CL:0002087,3.64e-11,115;CL:0002031,5.58e-09,120;CL:0000738,7.03e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.96e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.82e-18!235;DOID:14566!8.99e-18!239;DOID:2531!4.53e-13!51;DOID:0060083!4.53e-13!51;DOID:1240!7.32e-13!39;DOID:8692!1.15e-09!31;DOID:0050686!2.46e-09!137;DOID:0050687!2.09e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.87e-13;39!DOID:8692;6.13e-11;31!DOID:2531;1.20e-10;51!DOID:0060083;1.20e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.59e-16,39;DOID:2531,1.55e-15,51;DOID:0060083,1.55e-15,51;DOID:8692,2.78e-11,31;DOID:162,7.64e-09,235;DOID:14566,3.07e-08,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p7@PRPF38B | |||
}} |
Revision as of 23:17, 11 September 2013
Short description: | p7@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PRPF38B_5end |
Coexpression cluster: | NA |
Association with transcript: | -262bp_to_AY211915_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | Q5VTL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 3.92e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.92e-15 | 161 |
hematopoietic stem cell | 3.83e-14 | 168 |
lymphocyte | 6.89e-13 | 53 |
common lymphoid progenitor | 6.89e-13 | 53 |
hematopoietic cell | 2.30e-12 | 177 |
lymphoid lineage restricted progenitor cell | 2.97e-12 | 52 |
nongranular leukocyte | 3.64e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 5.58e-09 | 120 |
leukocyte | 7.03e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.59e-16 | 39 |
hematologic cancer | 1.55e-15 | 51 |
immune system cancer | 1.55e-15 | 51 |
myeloid leukemia | 2.78e-11 | 31 |
cancer | 7.64e-09 | 235 |
disease of cellular proliferation | 3.07e-08 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.