FFCP PHASE1:Hg19::chr1:1535455..1535568,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=643988|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=F2Z333|association_with_transcript=0bp_to_ENST00000422725,NM_001242659_5end|coexpression_cluster_id=C88|description=CAGE_peak_1_at_LOC643988_5end|id=chr1:1535455..1535568,-|ontology_enrichment_celltype=CL:0000148!2.71e-07!10;CL:0000541!2.71e-07!10;CL:0000055!5.52e-07!180|ontology_enrichment_celltype_v019=CL:0000148;7.06e-08;10|ontology_enrichment_celltype_v019_2=CL:0000148,8.35e-08,10;CL:0000541,8.35e-08,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.90685406832891,1.71280419112787,1.69145284915165,1.0007329835313,2.68176656656373,4.36169262050184,2.53299878168311,3.15859936713415,3.3954131665979,0,2.09340350391728,3.27662058195258,6.06664049925443,0.618831764800233,0.994192127183747,0,1.20538905604795,0.730310090387373,1.46379839637152,1.23121058076788,1.83600622119828,1.88072832886853,0.572471974262113,0.410623275218653,0.376627918784408,0,0,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,1.50602959389125,0.369754010166788,0,0,4.69760702935756,1.10799081706375,0.401088894940283,1.73608696572681,0.447830948479849,1.94336199611388,1.03030227053675,0.581592955118259,0,0.727752183563449,0,0.411167888021826,0,0.575384784644301,0.512321413058201,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0.639337125799041,0.329851300186716,0.598390972864896,0.852449501065388,0,0,0,0.502497330513487,0,0,0,0,0,0.633765858935825,0.850417199860174,0.628975936525128,0.44931452458598,0.300353785683013,0.32145117339416,1.99508920618874,1.19350006319454,0.547992461293902,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0,0,0,0,2.10707267820062,1.37696839079683,0.393010762749165,0.616804496998528,0.83593247695339,0,0,0,0.334231370655521,0,0,0,1.0247305578054,0.910415432919148,1.80881695064044,1.38175008892924,1.15921234294021,0.296573126324121,0.535081656179426,0,1.35971211237079,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.255973222308837,1.24930726552346,0,0,0.604820229674197,0,1.73789284659359,0,0,6.26526553033299,1.80719576192283,1.50401373190767,2.89693037921647,0.795285947051099,0.486634870302636,0.189069634328136,1.55210578223795,0.790513071238134,2.5540919722054,1.09288586487763,0,1.62273696827342,2.26368658489047,4.25465473660369,0.238490624305342,0,0,1.39133685156694,0.860234595106124,0.347140501607594,0,3.35599548967925,2.47606237746061,1.46296476575767,0,0.71153252537342,1.33888245105868,1.61131726843659,2.28081631715554,1.95249646038536,1.47065232138347,0.81014194788176,0.267899184852239,0.673588117878509,0,4.5994991239765,2.84779697870439,2.5648244150257,1.31780417436063,0,1.74437620857014,3.47880366186723,1.77282716330412,0.529636723252875,1.14734648299525,5.32002573297536,8.41016400213461,2.1349799145941,10.1133694851036,4.97937656639626,2.02066008104532,2.28846664358842,2.4217188423189,3.45705554687999,0,5.30672130611545,2.2818872861778,5.67904986096844,0.352303495931295,0.809364721840658,0.842704840213491,0.61246251376468,0.859840221182376,1.44656093646072,4.75201142912821,2.47266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.750711119231785,1.10825646193673,1.75591048352335,1.22595118319608,4.5071417671979,2.83580457900053,0.538168907066586,1.2813443329114,2.96704661623387,0.600182192168805,0.824420233907511,1.03056216018252,2.04728541964749,0.337552664482532,1.26668106709558,0.757301322732344,1.84099797284599,0.323292113637624,1.06502877754984,2.01504196455281,1.52604533079439,1.54608682530637,1.63647672354501,1.43402297694502,7.44039607390532,3.04818467139416,5.92589108634544,3.62813692553797,4.03713361401005,2.18986415445498,0,1.28648187638577,5.52539685409922,0,2.88751792667834,1.18306800039844,1.18009283054671,1.68707720918437,1.54411561825352,0.871517776369625,1.42362371466658,1.07865046528132,0.784885860501384,1.15424147083917,0.738155454624648,5.60967095213783,3.7041661019826,2.94017422771084,0,0,0.590789906681404,0,1.35287282397425,1.02940686179115,3.07300799144152,1.1240175325762,2.6137532827024,1.01847289674383,0.325808305310325,1.03993478527958,1.44331342025273,0.695582429850461,0.352226082707465,1.87676382089396,0.462985512576611,0.951270761172991,16.5942923571448,12.0188062693282,3.20082107913617,2.34004265139238,4.45893486866185,0,0.16798212819886,0.141775097242386,0.716468181622786,1.16253575405585,8.05103626246943,0,4.93071230474066,2.07328115540772,1.29707958075265,2.27236380167484,20.8908072221236,46.9845763436682,52.7478512445211,30.7930402840869,23.5474958290611,5.70651809903443,15.1488009294206,1.23344192779897,0.43596006883328,1.466765716419,1.55126058909333,14.3062578340753,3.381211010224,1.06375246633948,7.28052058379563,1.54324424557285,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=643988 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=F2Z333 | |||
|association_with_transcript=0bp_to_ENST00000422725,NM_001242659_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_1_at_LOC643988_5end | |||
|id=chr1:1535455..1535568,- | |||
|ontology_enrichment_celltype=CL:0000148!2.71e-07!10;CL:0000541!2.71e-07!10;CL:0000055!5.52e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.06e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.35e-08,10;CL:0000541,8.35e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@LOC643988 | |||
}} |
Revision as of 00:31, 12 September 2013
Short description: | p1@LOC643988 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC643988_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_ENST00000422725, NM_001242659_5end |
EntrezGene: | LOC643988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.35e-08 | 10 |
melanoblast | 8.35e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.