FFCP PHASE1:Hg19::chr1:183204105..183204116,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C91|description=CAGE_peak_at_chr1:183204105..183204116,+|id=chr1:183204105..183204116,+|ontology_enrichment_celltype=CL:0002494!9.72e-15!16;CL:0000569!2.85e-11!4;CL:0000011!2.85e-11!4;CL:1000306!1.30e-10!4;CL:0002547!1.30e-10!4;CL:0002548!5.21e-07!6;CL:0002589!9.09e-07!2|ontology_enrichment_celltype_v019=CL:0000569;9.87e-34;4!CL:0002589;9.07e-18;2!CL:0002593;9.07e-18;2!CL:1000306;1.12e-09;4!CL:0002547;1.12e-09;4!CL:0002494;3.01e-09;16!CL:0002595;6.55e-08;5|ontology_enrichment_celltype_v019_2=CL:0000569,9.88e-34,4;CL:0000011,9.88e-34,4;CL:0002589,9.07e-18,2;CL:0002593,1.27e-17,2;CL:1000306,1.12e-09,4;CL:0002547,1.12e-09,4;CL:0002494,3.01e-09,16;CL:0002595,7.49e-08,5|ontology_enrichment_development_v019=CL:0000011;9.87e-34;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.42e-18!27;UBERON:0000948!6.22e-16!24;UBERON:0005498!6.22e-16!24;UBERON:0004140!6.22e-16!24;UBERON:0009881!6.22e-16!24;UBERON:0004141!6.22e-16!24;UBERON:0003084!6.22e-16!24;UBERON:0007005!6.22e-16!24;UBERON:0004139!6.22e-16!24;UBERON:0004291!6.22e-16!24;UBERON:0004872!1.30e-15!84;UBERON:0001009!1.04e-11!113;UBERON:0003914!8.54e-11!118;UBERON:0000415!1.30e-10!4;UBERON:0007240!1.30e-10!4;UBERON:0005742!1.30e-10!4;UBERON:0005734!1.30e-10!4;UBERON:0004664!1.30e-10!4;UBERON:0004663!1.30e-10!4;UBERON:0004573!1.35e-10!33;UBERON:0004571!1.35e-10!33;UBERON:0001637!1.67e-10!42;UBERON:0003509!1.67e-10!42;UBERON:0004572!1.67e-10!42;UBERON:0004535!3.38e-10!110;UBERON:0003103!1.05e-09!69;UBERON:0002118!5.60e-09!5;UBERON:0004532!5.60e-09!5;UBERON:0001981!1.77e-08!60;UBERON:0007500!1.77e-08!60;UBERON:0004537!1.77e-08!60;UBERON:0006965!1.77e-08!60;UBERON:0000060!7.46e-07!12;UBERON:0000055!7.76e-07!69;UBERON:0001529!9.09e-07!2;UBERON:0007204!9.09e-07!2|ontology_enrichment_uberon_v019=UBERON:0001529;9.07e-18;2!UBERON:0002456;9.07e-18;2!UBERON:0007204;9.07e-18;2!UBERON:0004797;1.12e-09;4!UBERON:0000415;1.12e-09;4!UBERON:0007240;1.12e-09;4!UBERON:0005742;1.12e-09;4!UBERON:0005734;1.12e-09;4!UBERON:0004664;1.12e-09;4!UBERON:0004663;1.12e-09;4!UBERON:0004573;1.87e-08;33!UBERON:0004571;1.87e-08;33!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0002118;6.55e-08;5!UBERON:0001637;4.50e-07;42!UBERON:0003509;4.50e-07;42!UBERON:0004572;4.50e-07;42!UBERON:0000948;5.57e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001529,9.07e-18,2;UBERON:0007204,9.07e-18,2;UBERON:0002456,1.27e-17,2;UBERON:0004872,2.17e-10,83;UBERON:0004573,9.32e-10,33;UBERON:0004571,9.32e-10,33;UBERON:0000415,1.12e-09,4;UBERON:0007240,1.12e-09,4;UBERON:0005742,1.12e-09,4;UBERON:0005734,1.12e-09,4;UBERON:0004664,1.12e-09,4;UBERON:0004663,1.12e-09,4;UBERON:0004535,5.27e-08,109;UBERON:0002118,5.73e-08,5;UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5;UBERON:0001637,8.13e-08,42;UBERON:0003509,8.13e-08,42;UBERON:0004572,8.13e-08,42;UBERON:0001009,8.45e-08,112;UBERON:0003914,1.76e-07,117|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,4.10468460520978,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.9266210955196,1.28812398067792,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr1:183204105..183204116,+ | |||
|id=chr1:183204105..183204116,+ | |||
|ontology_enrichment_celltype=CL:0002494!9.72e-15!16;CL:0000569!2.85e-11!4;CL:0000011!2.85e-11!4;CL:1000306!1.30e-10!4;CL:0002547!1.30e-10!4;CL:0002548!5.21e-07!6;CL:0002589!9.09e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000569;9.87e-34;4!CL:0002589;9.07e-18;2!CL:0002593;9.07e-18;2!CL:1000306;1.12e-09;4!CL:0002547;1.12e-09;4!CL:0002494;3.01e-09;16!CL:0002595;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,9.88e-34,4;CL:0000011,9.88e-34,4;CL:0002589,9.07e-18,2;CL:0002593,1.27e-17,2;CL:1000306,1.12e-09,4;CL:0002547,1.12e-09,4;CL:0002494,3.01e-09,16;CL:0002595,7.49e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000011;9.87e-34;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.42e-18!27;UBERON:0000948!6.22e-16!24;UBERON:0005498!6.22e-16!24;UBERON:0004140!6.22e-16!24;UBERON:0009881!6.22e-16!24;UBERON:0004141!6.22e-16!24;UBERON:0003084!6.22e-16!24;UBERON:0007005!6.22e-16!24;UBERON:0004139!6.22e-16!24;UBERON:0004291!6.22e-16!24;UBERON:0004872!1.30e-15!84;UBERON:0001009!1.04e-11!113;UBERON:0003914!8.54e-11!118;UBERON:0000415!1.30e-10!4;UBERON:0007240!1.30e-10!4;UBERON:0005742!1.30e-10!4;UBERON:0005734!1.30e-10!4;UBERON:0004664!1.30e-10!4;UBERON:0004663!1.30e-10!4;UBERON:0004573!1.35e-10!33;UBERON:0004571!1.35e-10!33;UBERON:0001637!1.67e-10!42;UBERON:0003509!1.67e-10!42;UBERON:0004572!1.67e-10!42;UBERON:0004535!3.38e-10!110;UBERON:0003103!1.05e-09!69;UBERON:0002118!5.60e-09!5;UBERON:0004532!5.60e-09!5;UBERON:0001981!1.77e-08!60;UBERON:0007500!1.77e-08!60;UBERON:0004537!1.77e-08!60;UBERON:0006965!1.77e-08!60;UBERON:0000060!7.46e-07!12;UBERON:0000055!7.76e-07!69;UBERON:0001529!9.09e-07!2;UBERON:0007204!9.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;9.07e-18;2!UBERON:0002456;9.07e-18;2!UBERON:0007204;9.07e-18;2!UBERON:0004797;1.12e-09;4!UBERON:0000415;1.12e-09;4!UBERON:0007240;1.12e-09;4!UBERON:0005742;1.12e-09;4!UBERON:0005734;1.12e-09;4!UBERON:0004664;1.12e-09;4!UBERON:0004663;1.12e-09;4!UBERON:0004573;1.87e-08;33!UBERON:0004571;1.87e-08;33!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0002118;6.55e-08;5!UBERON:0001637;4.50e-07;42!UBERON:0003509;4.50e-07;42!UBERON:0004572;4.50e-07;42!UBERON:0000948;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,9.07e-18,2;UBERON:0007204,9.07e-18,2;UBERON:0002456,1.27e-17,2;UBERON:0004872,2.17e-10,83;UBERON:0004573,9.32e-10,33;UBERON:0004571,9.32e-10,33;UBERON:0000415,1.12e-09,4;UBERON:0007240,1.12e-09,4;UBERON:0005742,1.12e-09,4;UBERON:0005734,1.12e-09,4;UBERON:0004664,1.12e-09,4;UBERON:0004663,1.12e-09,4;UBERON:0004535,5.27e-08,109;UBERON:0002118,5.73e-08,5;UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5;UBERON:0001637,8.13e-08,42;UBERON:0003509,8.13e-08,42;UBERON:0004572,8.13e-08,42;UBERON:0001009,8.45e-08,112;UBERON:0003914,1.76e-07,117 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,4.10468460520978,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0.9266210955196,1.28812398067792,0,0,0,0,0,0,0,0,0,0,0.606547444719948,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0.199679000498991,0.429226048136571,0,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,1.37304041038154,1.20984739010591,0.310874401165561,0.295710299979268,0,0,0,0,0,0.521745061811734,0,0.761610424337591,0.406870733204662,0.363697318405119,0.322231671127465,1.39210127963548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:183204105..183204116,+ | |||
}} |
Revision as of 02:10, 12 September 2013
Short description: | p@chr1:183204105..183204116, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:183204105..183204116, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 9.88e-34 | 4 |
migratory trunk neural crest cell | 9.88e-34 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 9.07e-18 | 2 |
smooth muscle cell of the internal thoracic artery | 1.27e-17 | 2 |
fibroblast of tunica adventitia of artery | 1.12e-09 | 4 |
fibroblast of the aortic adventitia | 1.12e-09 | 4 |
cardiocyte | 3.01e-09 | 16 |
smooth muscle cell of the subclavian artery | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 9.07e-18 | 2 |
brachiocephalic vasculature | 9.07e-18 | 2 |
internal thoracic artery | 1.27e-17 | 2 |
splanchnic layer of lateral plate mesoderm | 2.17e-10 | 83 |
systemic artery | 9.32e-10 | 33 |
systemic arterial system | 9.32e-10 | 33 |
artery wall | 1.12e-09 | 4 |
tunica adventitia of artery | 1.12e-09 | 4 |
adventitia | 1.12e-09 | 4 |
tunica adventitia of blood vessel | 1.12e-09 | 4 |
aorta tunica adventitia | 1.12e-09 | 4 |
aorta wall | 1.12e-09 | 4 |
cardiovascular system | 5.27e-08 | 109 |
right ovary | 5.73e-08 | 5 |
thoracic segment blood vessel | 7.49e-08 | 5 |
subclavian artery | 7.49e-08 | 5 |
artery | 8.13e-08 | 42 |
arterial blood vessel | 8.13e-08 | 42 |
arterial system | 8.13e-08 | 42 |
circulatory system | 8.45e-08 | 112 |
epithelial tube | 1.76e-07 | 117 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.