FFCP PHASE1:Hg19::chr1:186269287..186269295,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10216|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=9364|TSSclassifier=S|UniProt=Q92954|association_with_transcript=47bp_to_AY653037_5end|coexpression_cluster_id=C287|description=CAGE_peak_7_at_PRG4_5end|id=chr1:186269287..186269295,+|ontology_enrichment_celltype=CL:0000153!9.52e-22!9;CL:0000447!9.52e-22!9;CL:0000327!6.16e-14!14;CL:0000667!1.29e-12!6;CL:0000058!1.29e-12!6;CL:0000138!1.29e-12!6;CL:0000214!3.25e-11!3;CL:0000499!3.96e-07!27|ontology_enrichment_celltype_v019=CL:0000138;2.22e-27;6!CL:0000153;1.18e-18;9!CL:0000447;1.18e-18;9!CL:0002521;1.71e-14;3!CL:0000327;1.24e-11;15|ontology_enrichment_celltype_v019_2=CL:0000058,1.82e-27,6;CL:0000138,1.82e-27,6;CL:0000153,1.03e-18,9;CL:0000447,1.03e-18,9;CL:0002521,2.09e-14,3;CL:0000327,1.15e-11,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006915!3.25e-11!3;UBERON:0002018!3.25e-11!3;UBERON:0002217!3.25e-11!3;UBERON:0007616!3.25e-11!3;UBERON:0005057!2.01e-10!26;UBERON:0002107!2.33e-10!19;UBERON:0006925!2.33e-10!19;UBERON:0008836!2.33e-10!19;UBERON:0002426!2.82e-09!1;UBERON:0003831!2.82e-09!1;UBERON:0003898!2.82e-09!1;UBERON:0004830!2.82e-09!1;UBERON:0001774!2.82e-09!1;UBERON:0003830!2.82e-09!1;UBERON:0005175!2.82e-09!1;UBERON:0003897!2.82e-09!1;UBERON:0001103!2.82e-09!1;UBERON:0010084!2.82e-09!1;UBERON:0008835!6.45e-09!22;UBERON:0003894!6.45e-09!22;UBERON:0009854!1.61e-08!23;UBERON:0007499!8.07e-08!25;UBERON:0009497!8.07e-08!25;UBERON:0000015!8.07e-08!25;UBERON:0002423!8.07e-08!25;UBERON:0006235!8.07e-08!25;UBERON:0004161!8.07e-08!25;UBERON:0002368!1.31e-07!35;UBERON:0009856!1.65e-07!26;UBERON:0004905!4.56e-07!5;UBERON:0000982!4.56e-07!5;UBERON:0004770!4.56e-07!5|ontology_enrichment_uberon_v019=UBERON:0002190;1.71e-14;3!UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0002072;3.10e-09;5!UBERON:0002423;2.43e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.09e-14,3;UBERON:0002107,2.36e-09,19;UBERON:0006925,2.36e-09,19;UBERON:0008836,2.36e-09,19;UBERON:0002072,3.49e-09,5;UBERON:0008835,3.27e-08,22;UBERON:0003894,3.27e-08,22;UBERON:0009854,6.75e-08,23;UBERON:0007499,2.43e-07,25;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0009856,4.28e-07,26|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,3.1811437882044,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p7@PRG4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=9364 | |||
|TSSclassifier=S | |||
|UniProt=Q92954 | |||
|association_with_transcript=47bp_to_AY653037_5end | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_7_at_PRG4_5end | |||
|id=chr1:186269287..186269295,+ | |||
|ontology_enrichment_celltype=CL:0000153!9.52e-22!9;CL:0000447!9.52e-22!9;CL:0000327!6.16e-14!14;CL:0000667!1.29e-12!6;CL:0000058!1.29e-12!6;CL:0000138!1.29e-12!6;CL:0000214!3.25e-11!3;CL:0000499!3.96e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.22e-27;6!CL:0000153;1.18e-18;9!CL:0000447;1.18e-18;9!CL:0002521;1.71e-14;3!CL:0000327;1.24e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.82e-27,6;CL:0000138,1.82e-27,6;CL:0000153,1.03e-18,9;CL:0000447,1.03e-18,9;CL:0002521,2.09e-14,3;CL:0000327,1.15e-11,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!3.25e-11!3;UBERON:0002018!3.25e-11!3;UBERON:0002217!3.25e-11!3;UBERON:0007616!3.25e-11!3;UBERON:0005057!2.01e-10!26;UBERON:0002107!2.33e-10!19;UBERON:0006925!2.33e-10!19;UBERON:0008836!2.33e-10!19;UBERON:0002426!2.82e-09!1;UBERON:0003831!2.82e-09!1;UBERON:0003898!2.82e-09!1;UBERON:0004830!2.82e-09!1;UBERON:0001774!2.82e-09!1;UBERON:0003830!2.82e-09!1;UBERON:0005175!2.82e-09!1;UBERON:0003897!2.82e-09!1;UBERON:0001103!2.82e-09!1;UBERON:0010084!2.82e-09!1;UBERON:0008835!6.45e-09!22;UBERON:0003894!6.45e-09!22;UBERON:0009854!1.61e-08!23;UBERON:0007499!8.07e-08!25;UBERON:0009497!8.07e-08!25;UBERON:0000015!8.07e-08!25;UBERON:0002423!8.07e-08!25;UBERON:0006235!8.07e-08!25;UBERON:0004161!8.07e-08!25;UBERON:0002368!1.31e-07!35;UBERON:0009856!1.65e-07!26;UBERON:0004905!4.56e-07!5;UBERON:0000982!4.56e-07!5;UBERON:0004770!4.56e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.71e-14;3!UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0002072;3.10e-09;5!UBERON:0002423;2.43e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.09e-14,3;UBERON:0002107,2.36e-09,19;UBERON:0006925,2.36e-09,19;UBERON:0008836,2.36e-09,19;UBERON:0002072,3.49e-09,5;UBERON:0008835,3.27e-08,22;UBERON:0003894,3.27e-08,22;UBERON:0009854,6.75e-08,23;UBERON:0007499,2.43e-07,25;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0009856,4.28e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,3.1811437882044,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p7@PRG4 | |||
}} |
Revision as of 02:21, 12 September 2013
Short description: | p7@PRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PRG4_5end |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | 47bp_to_AY653037_5end |
EntrezGene: | PRG4 |
HGNC: | 9364 |
UniProt: | Q92954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.82e-27 | 6 |
chondrocyte | 1.82e-27 | 6 |
GAG secreting cell | 1.03e-18 | 9 |
carbohydrate secreting cell | 1.03e-18 | 9 |
subcutaneous fat cell | 2.09e-14 | 3 |
extracellular matrix secreting cell | 1.15e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.09e-14 | 3 |
liver | 2.36e-09 | 19 |
digestive gland | 2.36e-09 | 19 |
liver bud | 2.36e-09 | 19 |
hypodermis | 3.49e-09 | 5 |
hepatic diverticulum | 3.27e-08 | 22 |
liver primordium | 3.27e-08 | 22 |
digestive tract diverticulum | 6.75e-08 | 23 |
epithelial sac | 2.43e-07 | 25 |
epithelium of foregut-midgut junction | 2.43e-07 | 25 |
anatomical boundary | 2.43e-07 | 25 |
hepatobiliary system | 2.43e-07 | 25 |
foregut-midgut junction | 2.43e-07 | 25 |
septum transversum | 2.43e-07 | 25 |
sac | 4.28e-07 | 26 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.