FFCP PHASE1:Hg19::chr1:19536933..19536972,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23352|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30313|TSSclassifier=S|UniProt=Q5T4S7|association_with_transcript=-163bp_to_ENST00000375254_5end|description=CAGE_peak_6_at_UBR4_5end|id=chr1:19536933..19536972,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000064,8.38e-07,3;CL:0000067,8.38e-07,3;CL:0005012,8.38e-07,3;CL:0002304,8.38e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.74e-08!115|ontology_enrichment_uberon_v019=UBERON:0006876;2.38e-07;11!UBERON:0002346;3.62e-07;4!UBERON:0000923;3.62e-07;4!UBERON:0010316;3.62e-07;4!UBERON:0005291;3.62e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0006876,7.38e-08,11;UBERON:0001778,8.38e-07,3;UBERON:0001775,8.38e-07,3|phase1_expression=0.908391896352783,0,0.422863212287913,0,1.34088328328186,0,0,0,0,0.491467873003018,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0.730310090387373,0,1.10808952269109,0.612002073732759,0.626909442956176,0.85870796139317,0.410623275218653,0.251085279189606,0.382067028739756,0.0821005894499457,0.236132343941038,0,1.15148819429164,0,0,0.6024118375565,0.369754010166788,0.309868802321207,0.426507697462265,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0,0.182664153764634,1.75996244461323,0,0,0.853460445133014,1.60158394814405,1.14950487990897,0.661044872784862,0,1.1384259382189,0,1.52909291250092,1.32171328579026,0,1.05353633910031,0.786839080455332,0.393010762749165,0.822405995998037,0.501559486172034,1.62961133316795,0.473447805734733,0,0,0,0.221533894583621,0.541607727530031,0,0.390178042679635,0.164437904603676,0.276350017785848,0.579606171470105,0.741432815810302,0.267540828089713,2.09071047609954,0.226618685395132,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0.80642697289893,0,0.289648807765598,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,1.5905718941022,0,3.02511414925017,1.99556457716308,2.81071314218003,1.89919659471683,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0.838998872419812,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,0.337834441449967,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0.496971951695318,0.12663051166458,1.19168262731897,1.43418310374407,0,0,0,0,0,0.404132016209064,0.163461903113459,2.27036141467397,2.30470369792,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0.491337269247072,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0,0,1.4351170855109,0.213557388818567,0,0.900273288253207,0.309157587715317,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0.757301322732344,0.368199594569197,0.323292113637624,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0.397589304964456,0.232387885739037,0.621966330092223,0.504641701751257,0,0,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.109750285408626,1.1240175325762,0,0.462942225792648,0.325808305310325,1.03993478527958,1.44331342025273,0.463721619900307,1.52631302506568,0.144366447761074,0.925971025153221,0.380508304469197,0.790204397959275,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.335964256397719,0.283550194484773,0.268675568108545,0.581267877027924,0,0,0,0.414656231081544,0.432359860250884,0.37872730027914,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.897048674762886,2.1798003441664,0.51336800074665,0.904902010304444,0,0,0.797814349754612,4.16029747645464,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,1.79951384127703,0,0,0,0.718874566474748,0,0,0.434343920002738,0.205476322550383,0.716243852959582,0.448340575974109,1.37921532141349,0.215627574859517,0.385029108839245,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,1.08506009479894,0.831883446123229,0.356857977594324,0.473107245101804,1.40569697991256,0.300946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0.184369168541703,0.260650843404249,1.37060810223918,0,1.03384013061444,0.215714200818617,0.533637789017222,0.606255142892519,0,0.30239029332968,0.248107807818777,1.53461973288062,0.28066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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30313 | |||
|TSSclassifier=S | |||
|UniProt=Q5T4S7 | |||
|association_with_transcript=-163bp_to_ENST00000375254_5end | |||
|description=CAGE_peak_6_at_UBR4_5end | |||
|id=chr1:19536933..19536972,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,8.38e-07,3;CL:0000067,8.38e-07,3;CL:0005012,8.38e-07,3;CL:0002304,8.38e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.74e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;2.38e-07;11!UBERON:0002346;3.62e-07;4!UBERON:0000923;3.62e-07;4!UBERON:0010316;3.62e-07;4!UBERON:0005291;3.62e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,7.38e-08,11;UBERON:0001778,8.38e-07,3;UBERON:0001775,8.38e-07,3 | |||
|phase1_expression=0.908391896352783,0,0.422863212287913,0,1.34088328328186,0,0,0,0,0.491467873003018,0,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0.730310090387373,0,1.10808952269109,0.612002073732759,0.626909442956176,0.85870796139317,0.410623275218653,0.251085279189606,0.382067028739756,0.0821005894499457,0.236132343941038,0,1.15148819429164,0,0,0.6024118375565,0.369754010166788,0.309868802321207,0.426507697462265,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0.16072558669708,0.285012743741249,0,0.182664153764634,1.75996244461323,0,0,0.853460445133014,1.60158394814405,1.14950487990897,0.661044872784862,0,1.1384259382189,0,1.52909291250092,1.32171328579026,0,1.05353633910031,0.786839080455332,0.393010762749165,0.822405995998037,0.501559486172034,1.62961133316795,0.473447805734733,0,0,0,0.221533894583621,0.541607727530031,0,0.390178042679635,0.164437904603676,0.276350017785848,0.579606171470105,0.741432815810302,0.267540828089713,2.09071047609954,0.226618685395132,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0.80642697289893,0,0.289648807765598,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,1.5905718941022,0,3.02511414925017,1.99556457716308,2.81071314218003,1.89919659471683,0.364295288292542,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0.838998872419812,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0.267899184852239,0.22452937262617,0.337834441449967,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0.496971951695318,0.12663051166458,1.19168262731897,1.43418310374407,0,0,0,0,0,0.404132016209064,0.163461903113459,2.27036141467397,2.30470369792,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.140450806702248,0.408308342509787,0.491337269247072,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0,0,1.4351170855109,0.213557388818567,0,0.900273288253207,0.309157587715317,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,0.757301322732344,0.368199594569197,0.323292113637624,0.710019185033229,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.487894824518382,0.397589304964456,0.232387885739037,0.621966330092223,0.504641701751257,0,0,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.109750285408626,1.1240175325762,0,0.462942225792648,0.325808305310325,1.03993478527958,1.44331342025273,0.463721619900307,1.52631302506568,0.144366447761074,0.925971025153221,0.380508304469197,0.790204397959275,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.335964256397719,0.283550194484773,0.268675568108545,0.581267877027924,0,0,0,0.414656231081544,0.432359860250884,0.37872730027914,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.897048674762886,2.1798003441664,0.51336800074665,0.904902010304444,0,0,0.797814349754612,4.16029747645464,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,1.79951384127703,0,0,0,0.718874566474748,0,0,0.434343920002738,0.205476322550383,0.716243852959582,0.448340575974109,1.37921532141349,0.215627574859517,0.385029108839245,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,1.08506009479894,0.831883446123229,0.356857977594324,0.473107245101804,1.40569697991256,0.300946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0.184369168541703,0.260650843404249,1.37060810223918,0,1.03384013061444,0.215714200818617,0.533637789017222,0.606255142892519,0,0.30239029332968,0.248107807818777,1.53461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0.616838775210622,0.532685175939381,0.410635780069046,0.519254429183621,0.348631135379878,0.241718899183244,0.40101294060657,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0.231046011313244,0,0,0.105551628892876,0,0.510281115829547,0.647747748306418,0,0.812839312631559,0,0.254876273045038,0.831076008928724,0,0,0,0,0.984043937099117,0.325378394664303,0.618246069886334,0.457847324091717,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.616194468458578,0.767518373630648,0.137836572484531,0.322260734604821,0.290033387828457,0.170453254832202,0.534192213880424,0,0.384380134730212,0.638063562472921,0.4046311234222,0,0,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,1.48863347743867,1.89827654831236,0.762520775695299,0.511795582622668,0.42793898803392,0.318203247925937,0,0.899362287916574,0,0.117812402345686,0,0,0.421258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| |||
|short_description=p6@UBR4 | |||
}} |
Revision as of 02:32, 12 September 2013
Short description: | p6@UBR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_UBR4_5end |
Coexpression cluster: | NA |
Association with transcript: | -163bp_to_ENST00000375254_5end |
EntrezGene: | UBR4 |
HGNC: | 30313 |
UniProt: | Q5T4S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 8.38e-07 | 3 |
ciliated epithelial cell | 8.38e-07 | 3 |
multi-ciliated epithelial cell | 8.38e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 7.38e-08 | 11 |
ciliary epithelium | 8.38e-07 | 3 |
ciliary body | 8.38e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.