FFCP PHASE1:Hg19::chr1:32138825..32138837,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1307|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2193|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000479100_5end|description=CAGE_peak_16_at_COL16A1_5end|id=chr1:32138825..32138837,-|ontology_enrichment_celltype=CL:0000188!3.38e-08!9;CL:0000242!2.87e-07!2|ontology_enrichment_celltype_v019=CL:0002575;1.56e-12;2!CL:0000669;6.68e-07;4|ontology_enrichment_celltype_v019_2=CL:0002575,1.65e-12,2;CL:0000669,6.87e-07,4|ontology_enrichment_development_v019=UBERON:0000358;2.62e-23;1!UBERON:0010226;4.59e-23;1!UBERON:0003056;1.35e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;9.36e-07;4|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.02e-28!115;UBERON:0002780!7.07e-20!41;UBERON:0001890!7.07e-20!41;UBERON:0006240!7.07e-20!41;UBERON:0003080!2.68e-19!42;UBERON:0002619!4.44e-18!22;UBERON:0001950!3.85e-17!20;UBERON:0000955!8.61e-17!69;UBERON:0006238!8.61e-17!69;UBERON:0001049!3.46e-16!57;UBERON:0005068!3.46e-16!57;UBERON:0006241!3.46e-16!57;UBERON:0007135!3.46e-16!57;UBERON:0002346!7.10e-16!90;UBERON:0001869!1.08e-15!32;UBERON:0000073!1.22e-15!94;UBERON:0001016!1.22e-15!94;UBERON:0000956!1.23e-15!25;UBERON:0000203!1.23e-15!25;UBERON:0002616!1.81e-15!59;UBERON:0003075!1.85e-15!86;UBERON:0007284!1.85e-15!86;UBERON:0003056!4.85e-15!61;UBERON:0001893!1.38e-14!34;UBERON:0005743!1.32e-13!86;UBERON:0001017!3.05e-13!82;UBERON:0002791!3.81e-13!33;UBERON:0002020!1.12e-12!34;UBERON:0003528!1.12e-12!34;UBERON:0000924!5.10e-11!173;UBERON:0006601!5.10e-11!173;UBERON:0004121!1.40e-10!169;UBERON:0003978!7.51e-10!3;UBERON:0009751!7.51e-10!3;UBERON:0000946!7.51e-10!3;UBERON:0002523!7.51e-10!3;UBERON:0005983!7.51e-10!3;UBERON:0002165!7.51e-10!3;UBERON:0002062!7.51e-10!3;UBERON:0007280!7.51e-10!3;UBERON:0000153!1.07e-09!129;UBERON:0007811!1.07e-09!129;UBERON:0000349!1.45e-09!5;UBERON:0001871!2.56e-09!7;UBERON:0000033!1.24e-08!123;UBERON:0003296!1.01e-07!4;UBERON:0010133!1.01e-07!4;UBERON:0001905!1.07e-07!2;UBERON:0002757!1.07e-07!2;UBERON:0010134!1.07e-07!2;UBERON:0002784!1.07e-07!2;UBERON:0005408!1.07e-07!2;UBERON:0001899!1.07e-07!2;UBERON:0000200!1.38e-07!6;UBERON:0001876!2.96e-07!2;UBERON:0001894!3.13e-07!7;UBERON:0006222!3.13e-07!7;UBERON:0002133!4.00e-07!2|ontology_enrichment_uberon_v019=UBERON:0001905;3.57e-45;2!UBERON:0002757;3.57e-45;2!UBERON:0010134;3.57e-45;2!UBERON:0005408;3.57e-45;2!UBERON:0001899;3.57e-45;2!UBERON:0003296;3.48e-23;4!UBERON:0010133;3.48e-23;4!UBERON:0002784;3.48e-23;4!UBERON:0002084;4.59e-23;1!UBERON:0001000;4.59e-23;1!UBERON:0002082;4.59e-23;1!UBERON:0005352;4.59e-23;1!UBERON:0001894;1.05e-13;7!UBERON:0004151;1.35e-08;3!UBERON:0006947;1.35e-08;3!UBERON:0004054;1.35e-08;3!UBERON:0005904;9.36e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.19e-45,2;UBERON:0002757,3.19e-45,2;UBERON:0010134,3.19e-45,2;UBERON:0005408,3.19e-45,2;UBERON:0001899,3.19e-45,2;UBERON:0001000,3.28e-23,1;UBERON:0005352,3.28e-23,1;UBERON:0003296,3.29e-23,4;UBERON:0010133,3.29e-23,4;UBERON:0002784,3.29e-23,4;UBERON:0002084,5.13e-23,1;UBERON:0002082,5.13e-23,1;UBERON:0010226,5.13e-23,1;UBERON:0001894,1.02e-13,7;UBERON:0006222,1.02e-13,7;UBERON:0006947,1.21e-08,3;UBERON:0004054,1.21e-08,3;UBERON:0004151,1.40e-08,3;UBERON:0005904,8.61e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.83343820478455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0,0,0.689182862422653,0,0.145016693914229,0.340906509664404,4.45160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0.446342914883745,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2193 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000479100_5end | |||
|description=CAGE_peak_16_at_COL16A1_5end | |||
|id=chr1:32138825..32138837,- | |||
|ontology_enrichment_celltype=CL:0000188!3.38e-08!9;CL:0000242!2.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.56e-12;2!CL:0000669;6.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.65e-12,2;CL:0000669,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.62e-23;1!UBERON:0010226;4.59e-23;1!UBERON:0003056;1.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.02e-28!115;UBERON:0002780!7.07e-20!41;UBERON:0001890!7.07e-20!41;UBERON:0006240!7.07e-20!41;UBERON:0003080!2.68e-19!42;UBERON:0002619!4.44e-18!22;UBERON:0001950!3.85e-17!20;UBERON:0000955!8.61e-17!69;UBERON:0006238!8.61e-17!69;UBERON:0001049!3.46e-16!57;UBERON:0005068!3.46e-16!57;UBERON:0006241!3.46e-16!57;UBERON:0007135!3.46e-16!57;UBERON:0002346!7.10e-16!90;UBERON:0001869!1.08e-15!32;UBERON:0000073!1.22e-15!94;UBERON:0001016!1.22e-15!94;UBERON:0000956!1.23e-15!25;UBERON:0000203!1.23e-15!25;UBERON:0002616!1.81e-15!59;UBERON:0003075!1.85e-15!86;UBERON:0007284!1.85e-15!86;UBERON:0003056!4.85e-15!61;UBERON:0001893!1.38e-14!34;UBERON:0005743!1.32e-13!86;UBERON:0001017!3.05e-13!82;UBERON:0002791!3.81e-13!33;UBERON:0002020!1.12e-12!34;UBERON:0003528!1.12e-12!34;UBERON:0000924!5.10e-11!173;UBERON:0006601!5.10e-11!173;UBERON:0004121!1.40e-10!169;UBERON:0003978!7.51e-10!3;UBERON:0009751!7.51e-10!3;UBERON:0000946!7.51e-10!3;UBERON:0002523!7.51e-10!3;UBERON:0005983!7.51e-10!3;UBERON:0002165!7.51e-10!3;UBERON:0002062!7.51e-10!3;UBERON:0007280!7.51e-10!3;UBERON:0000153!1.07e-09!129;UBERON:0007811!1.07e-09!129;UBERON:0000349!1.45e-09!5;UBERON:0001871!2.56e-09!7;UBERON:0000033!1.24e-08!123;UBERON:0003296!1.01e-07!4;UBERON:0010133!1.01e-07!4;UBERON:0001905!1.07e-07!2;UBERON:0002757!1.07e-07!2;UBERON:0010134!1.07e-07!2;UBERON:0002784!1.07e-07!2;UBERON:0005408!1.07e-07!2;UBERON:0001899!1.07e-07!2;UBERON:0000200!1.38e-07!6;UBERON:0001876!2.96e-07!2;UBERON:0001894!3.13e-07!7;UBERON:0006222!3.13e-07!7;UBERON:0002133!4.00e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.57e-45;2!UBERON:0002757;3.57e-45;2!UBERON:0010134;3.57e-45;2!UBERON:0005408;3.57e-45;2!UBERON:0001899;3.57e-45;2!UBERON:0003296;3.48e-23;4!UBERON:0010133;3.48e-23;4!UBERON:0002784;3.48e-23;4!UBERON:0002084;4.59e-23;1!UBERON:0001000;4.59e-23;1!UBERON:0002082;4.59e-23;1!UBERON:0005352;4.59e-23;1!UBERON:0001894;1.05e-13;7!UBERON:0004151;1.35e-08;3!UBERON:0006947;1.35e-08;3!UBERON:0004054;1.35e-08;3!UBERON:0005904;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.19e-45,2;UBERON:0002757,3.19e-45,2;UBERON:0010134,3.19e-45,2;UBERON:0005408,3.19e-45,2;UBERON:0001899,3.19e-45,2;UBERON:0001000,3.28e-23,1;UBERON:0005352,3.28e-23,1;UBERON:0003296,3.29e-23,4;UBERON:0010133,3.29e-23,4;UBERON:0002784,3.29e-23,4;UBERON:0002084,5.13e-23,1;UBERON:0002082,5.13e-23,1;UBERON:0010226,5.13e-23,1;UBERON:0001894,1.02e-13,7;UBERON:0006222,1.02e-13,7;UBERON:0006947,1.21e-08,3;UBERON:0004054,1.21e-08,3;UBERON:0004151,1.40e-08,3;UBERON:0005904,8.61e-07,4 | |||
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|short_description=p16@COL16A1 | |||
}} |
Revision as of 05:15, 12 September 2013
Short description: | p16@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_COL16A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000479100_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.65e-12 | 2 |
pericyte cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.19e-45 | 2 |
regional part of epithalamus | 3.19e-45 | 2 |
secretory circumventricular organ | 3.19e-45 | 2 |
circumventricular organ | 3.19e-45 | 2 |
epithalamus | 3.19e-45 | 2 |
vas deferens | 3.28e-23 | 1 |
spermatic cord | 3.28e-23 | 1 |
gland of diencephalon | 3.29e-23 | 4 |
neuroendocrine gland | 3.29e-23 | 4 |
regional part of diencephalon | 3.29e-23 | 4 |
heart left ventricle | 5.13e-23 | 1 |
cardiac ventricle | 5.13e-23 | 1 |
future cardiac ventricle | 5.13e-23 | 1 |
diencephalon | 1.02e-13 | 7 |
future diencephalon | 1.02e-13 | 7 |
male genital duct | 1.21e-08 | 3 |
internal male genitalia | 1.21e-08 | 3 |
cardiac chamber | 1.40e-08 | 3 |
duct of male reproductive system | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.