FFCP PHASE1:Hg19::chr1:63063181..63063198,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27329|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=491|TSSclassifier=S|UniProt=B1ALJ0,Q9Y5C1|association_with_transcript=0bp_to_NM_014495,uc001das.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_ANGPTL3_5end|id=chr1:63063181..63063198,+|ontology_enrichment_celltype=CL:0000181!4.87e-24!12;CL:0000417!4.87e-24!12;CL:0000668!4.87e-24!12;CL:0000414!4.87e-24!12;CL:0000412!4.87e-24!12;CL:0000182!4.87e-24!12;CL:0000223!1.89e-08!59;CL:0002563!6.40e-07!4|ontology_enrichment_celltype_v019=CL:0000182;2.04e-24;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.25e-24,12;CL:0000223,6.23e-07,58|ontology_enrichment_development_v019=UBERON:0004161;2.59e-17;11!UBERON:0009497;1.07e-14;13!UBERON:0003104;6.81e-13;31!UBERON:0007297;4.83e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!5.28e-26!26;UBERON:0008835!6.64e-26!22;UBERON:0003894!6.64e-26!22;UBERON:0009854!1.06e-24!23;UBERON:0002107!1.21e-24!19;UBERON:0006925!1.21e-24!19;UBERON:0008836!1.21e-24!19;UBERON:0007499!1.40e-22!25;UBERON:0009497!1.40e-22!25;UBERON:0000015!1.40e-22!25;UBERON:0002423!1.40e-22!25;UBERON:0006235!1.40e-22!25;UBERON:0004161!1.40e-22!25;UBERON:0003929!8.81e-22!54;UBERON:0009856!1.21e-21!26;UBERON:0002368!9.80e-19!35;UBERON:0005172!4.79e-16!55;UBERON:0005173!4.79e-16!55;UBERON:0005911!3.13e-15!82;UBERON:0002365!1.62e-14!31;UBERON:0002330!1.62e-14!31;UBERON:0002417!3.30e-14!61;UBERON:0000916!3.30e-14!61;UBERON:0000949!4.14e-14!45;UBERON:0004921!4.78e-14!129;UBERON:0004185!4.78e-14!129;UBERON:0001007!2.47e-12!155;UBERON:0001555!2.47e-12!155;UBERON:0007026!2.47e-12!155;UBERON:0002530!2.68e-12!59;UBERON:0004119!5.87e-11!169;UBERON:0000925!5.87e-11!169;UBERON:0006595!5.87e-11!169;UBERON:0001041!4.10e-09!98;UBERON:0000077!2.08e-08!130;UBERON:0005177!3.29e-08!107;UBERON:0009569!1.26e-07!113;UBERON:0001301!2.09e-07!1;UBERON:0005409!3.74e-07!35;UBERON:0002146!4.60e-07!1;UBERON:0005623!4.60e-07!1;UBERON:0000481!5.45e-07!347;UBERON:0001242!6.40e-07!4;UBERON:0001262!6.40e-07!4;UBERON:0004786!6.40e-07!4;UBERON:0004808!6.40e-07!4;UBERON:0001277!6.40e-07!4;UBERON:0007190!6.57e-07!1|ontology_enrichment_uberon_v019=UBERON:0002107;8.38e-30;19!UBERON:0006925;8.38e-30;19!UBERON:0002423;1.56e-22;25!UBERON:0002365;3.31e-18;31!UBERON:0002330;3.31e-18;31!UBERON:0002368;2.26e-15;33!UBERON:0005172;4.63e-13;52!UBERON:0005173;4.63e-13;52!UBERON:0001301;8.15e-13;1!UBERON:0000949;1.02e-09;43!UBERON:0002417;1.26e-07;58!UBERON:0000916;1.26e-07;58!UBERON:0001007;1.84e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.14e-30,19;UBERON:0006925,9.14e-30,19;UBERON:0008836,9.14e-30,19;UBERON:0008835,1.21e-25,22;UBERON:0003894,1.21e-25,22;UBERON:0009854,1.66e-24,23;UBERON:0007499,1.66e-22,25;UBERON:0009497,1.66e-22,25;UBERON:0000015,1.66e-22,25;UBERON:0002423,1.66e-22,25;UBERON:0006235,1.66e-22,25;UBERON:0004161,1.66e-22,25;UBERON:0009856,1.28e-21,26;UBERON:0005172,1.90e-20,54;UBERON:0005173,1.90e-20,54;UBERON:0002417,2.77e-18,60;UBERON:0000916,2.77e-18,60;UBERON:0002365,4.78e-18,31;UBERON:0002330,4.78e-18,31;UBERON:0002368,6.39e-16,35;UBERON:0003929,3.95e-13,54;UBERON:0001301,6.82e-13,1;UBERON:0000949,2.98e-12,45;UBERON:0005177,2.38e-10,101;UBERON:0009569,3.32e-09,112;UBERON:0002530,3.39e-09,59;UBERON:0004921,1.39e-08,118;UBERON:0005911,2.38e-08,82;UBERON:0001041,8.18e-08,87;UBERON:0001007,9.50e-07,145;UBERON:0001555,9.50e-07,145;UBERON:0007026,9.50e-07,145|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,864.469337484886,578.885230623122,451.954278611274,0,9.47010976781974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,837.414301661039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,842.210441749066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=491 | |||
|TSSclassifier=S | |||
|UniProt=B1ALJ0,Q9Y5C1 | |||
|association_with_transcript=0bp_to_NM_014495,uc001das.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ANGPTL3_5end | |||
|id=chr1:63063181..63063198,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.87e-24!12;CL:0000417!4.87e-24!12;CL:0000668!4.87e-24!12;CL:0000414!4.87e-24!12;CL:0000412!4.87e-24!12;CL:0000182!4.87e-24!12;CL:0000223!1.89e-08!59;CL:0002563!6.40e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.04e-24;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.25e-24,12;CL:0000223,6.23e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.59e-17;11!UBERON:0009497;1.07e-14;13!UBERON:0003104;6.81e-13;31!UBERON:0007297;4.83e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!5.28e-26!26;UBERON:0008835!6.64e-26!22;UBERON:0003894!6.64e-26!22;UBERON:0009854!1.06e-24!23;UBERON:0002107!1.21e-24!19;UBERON:0006925!1.21e-24!19;UBERON:0008836!1.21e-24!19;UBERON:0007499!1.40e-22!25;UBERON:0009497!1.40e-22!25;UBERON:0000015!1.40e-22!25;UBERON:0002423!1.40e-22!25;UBERON:0006235!1.40e-22!25;UBERON:0004161!1.40e-22!25;UBERON:0003929!8.81e-22!54;UBERON:0009856!1.21e-21!26;UBERON:0002368!9.80e-19!35;UBERON:0005172!4.79e-16!55;UBERON:0005173!4.79e-16!55;UBERON:0005911!3.13e-15!82;UBERON:0002365!1.62e-14!31;UBERON:0002330!1.62e-14!31;UBERON:0002417!3.30e-14!61;UBERON:0000916!3.30e-14!61;UBERON:0000949!4.14e-14!45;UBERON:0004921!4.78e-14!129;UBERON:0004185!4.78e-14!129;UBERON:0001007!2.47e-12!155;UBERON:0001555!2.47e-12!155;UBERON:0007026!2.47e-12!155;UBERON:0002530!2.68e-12!59;UBERON:0004119!5.87e-11!169;UBERON:0000925!5.87e-11!169;UBERON:0006595!5.87e-11!169;UBERON:0001041!4.10e-09!98;UBERON:0000077!2.08e-08!130;UBERON:0005177!3.29e-08!107;UBERON:0009569!1.26e-07!113;UBERON:0001301!2.09e-07!1;UBERON:0005409!3.74e-07!35;UBERON:0002146!4.60e-07!1;UBERON:0005623!4.60e-07!1;UBERON:0000481!5.45e-07!347;UBERON:0001242!6.40e-07!4;UBERON:0001262!6.40e-07!4;UBERON:0004786!6.40e-07!4;UBERON:0004808!6.40e-07!4;UBERON:0001277!6.40e-07!4;UBERON:0007190!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.38e-30;19!UBERON:0006925;8.38e-30;19!UBERON:0002423;1.56e-22;25!UBERON:0002365;3.31e-18;31!UBERON:0002330;3.31e-18;31!UBERON:0002368;2.26e-15;33!UBERON:0005172;4.63e-13;52!UBERON:0005173;4.63e-13;52!UBERON:0001301;8.15e-13;1!UBERON:0000949;1.02e-09;43!UBERON:0002417;1.26e-07;58!UBERON:0000916;1.26e-07;58!UBERON:0001007;1.84e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.14e-30,19;UBERON:0006925,9.14e-30,19;UBERON:0008836,9.14e-30,19;UBERON:0008835,1.21e-25,22;UBERON:0003894,1.21e-25,22;UBERON:0009854,1.66e-24,23;UBERON:0007499,1.66e-22,25;UBERON:0009497,1.66e-22,25;UBERON:0000015,1.66e-22,25;UBERON:0002423,1.66e-22,25;UBERON:0006235,1.66e-22,25;UBERON:0004161,1.66e-22,25;UBERON:0009856,1.28e-21,26;UBERON:0005172,1.90e-20,54;UBERON:0005173,1.90e-20,54;UBERON:0002417,2.77e-18,60;UBERON:0000916,2.77e-18,60;UBERON:0002365,4.78e-18,31;UBERON:0002330,4.78e-18,31;UBERON:0002368,6.39e-16,35;UBERON:0003929,3.95e-13,54;UBERON:0001301,6.82e-13,1;UBERON:0000949,2.98e-12,45;UBERON:0005177,2.38e-10,101;UBERON:0009569,3.32e-09,112;UBERON:0002530,3.39e-09,59;UBERON:0004921,1.39e-08,118;UBERON:0005911,2.38e-08,82;UBERON:0001041,8.18e-08,87;UBERON:0001007,9.50e-07,145;UBERON:0001555,9.50e-07,145;UBERON:0007026,9.50e-07,145 | |||
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|short_description=p1@ANGPTL3 | |||
}} |
Revision as of 06:22, 12 September 2013
Short description: | p1@ANGPTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ANGPTL3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_014495, uc001das.1_5end |
EntrezGene: | ANGPTL3 |
HGNC: | 491 |
UniProt: | B1ALJ0Q9Y5C1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.25e-24 | 12 |
endodermal cell | 6.23e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.14e-30 | 19 |
digestive gland | 9.14e-30 | 19 |
liver bud | 9.14e-30 | 19 |
hepatic diverticulum | 1.21e-25 | 22 |
liver primordium | 1.21e-25 | 22 |
digestive tract diverticulum | 1.66e-24 | 23 |
epithelial sac | 1.66e-22 | 25 |
epithelium of foregut-midgut junction | 1.66e-22 | 25 |
anatomical boundary | 1.66e-22 | 25 |
hepatobiliary system | 1.66e-22 | 25 |
foregut-midgut junction | 1.66e-22 | 25 |
septum transversum | 1.66e-22 | 25 |
sac | 1.28e-21 | 26 |
abdomen element | 1.90e-20 | 54 |
abdominal segment element | 1.90e-20 | 54 |
abdominal segment of trunk | 2.77e-18 | 60 |
abdomen | 2.77e-18 | 60 |
exocrine gland | 4.78e-18 | 31 |
exocrine system | 4.78e-18 | 31 |
endocrine gland | 6.39e-16 | 35 |
gut epithelium | 3.95e-13 | 54 |
epididymis | 6.82e-13 | 1 |
endocrine system | 2.98e-12 | 45 |
trunk region element | 2.38e-10 | 101 |
subdivision of trunk | 3.32e-09 | 112 |
gland | 3.39e-09 | 59 |
subdivision of digestive tract | 1.39e-08 | 118 |
endo-epithelium | 2.38e-08 | 82 |
foregut | 8.18e-08 | 87 |
digestive system | 9.50e-07 | 145 |
digestive tract | 9.50e-07 | 145 |
primitive gut | 9.50e-07 | 145 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.