FFCP PHASE1:Hg19::chr20:5100591..5100611,-: Difference between revisions
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{{FFCP | 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30408,63.6217810722301,44.7447773049653,264.943154425248,104.149867959377,19.2986669276972,286.794705294899,94.8530031003902,65.718426930375,12.827381835684,57.6060936373242,90.6515113368874,15.8989722217241,12.4765934057881,37.037916228667,32.3810938084799,18.2056431582099,105.618266398807,69.4862303888077,100.33158859263,63.533885261146,97.2668815127058,136.548075980142,3.23714418593947,10.1636178787685,28.995360783455,44.6854113614408,128.90064436762,349.357561183363,115.352488054242,112.381351628765,255.391820399632,184.325631994908,20.7598485310371,70.3761784822742,580.371543710119,11.2768228006797,12.4908569963862,14.5268265665059,22.5755264248585,30.4312123860048,42.651705786642,25.4696417725403,45.6361846852926,204.679487334254,54.8160591519369,55.4044948593636,103.752087129095,18.9887460944094,13.7618785021362,25.6577853841098,107.600205415752,9.31483415615531,27.0537428011034,55.0187914136016,74.3990036333503,39.2849284336706,70.9507561883014,90.2089937570814,115.384443993662,185.866700983778,92.0959132570095,146.435138085527,40.8013353934711,145.66108032887,33.0395124231524,62.1676781962334,15.7542193497168,24.3067540275454,30.2792254299393,45.2322419781107,133.053154262173,88.3323184430058,131.64280666964,16.2936725192102,15.3609063608247,58.5658051842826,33.1966302052723,49.638463071751,24.3138276281173,26.9454888802271,180.226836704698,77.270598415466,17.3765054058246,6.91654056220719,39.8889602085872,13.3243174159324,49.2344375762044,11.3178651611537,36.0280090527937,133.356492798145|short_description=p1@PCNA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8729 | |||
|TSSclassifier=S | |||
|UniProt=P12004 | |||
|association_with_transcript=35bp_to_NM_182649,uc002wlp.2_5end | |||
|coexpression_cluster_id=C1145 | |||
|description=CAGE_peak_1_at_PCNA_5end | |||
|id=chr20:5100591..5100611,- | |||
|ontology_enrichment_celltype=CL:0000548!6.39e-21!679;CL:0000004!6.39e-21!679;CL:0000255!6.39e-21!679;CL:0000012!9.35e-21!682;CL:0000066!1.26e-18!254;CL:0000003!3.29e-15!722;CL:0000063!2.76e-13!578;CL:0000144!7.31e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.39e-19,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.60e-46!235;DOID:14566!2.56e-45!239;DOID:0050687!9.98e-23!143;DOID:0050686!1.59e-22!137;DOID:305!5.15e-22!106;DOID:2531!3.73e-17!51;DOID:0060083!3.73e-17!51;DOID:1240!8.08e-14!39;DOID:8692!2.87e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.41e-11;39!DOID:2531;7.28e-11;51!DOID:0060083;7.28e-11;51!DOID:8692;6.83e-10;31!DOID:305;2.82e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.60e-46,235;DOID:14566,2.56e-45,239;DOID:0050687,9.98e-23,143;DOID:0050686,1.59e-22,137;DOID:305,5.15e-22,106;DOID:2531,3.73e-17,51;DOID:0060083,3.73e-17,51;DOID:1240,8.08e-14,39;DOID:8692,2.87e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.39e-07;9!UBERON:0001557;7.39e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.45e-07,9 | |||
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| |||
|short_description=p1@PCNA | |||
}} |
Revision as of 09:10, 12 September 2013
Short description: | p1@PCNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PCNA_5end |
Coexpression cluster: | C1145_Hodgkin_chronic_acute_Reticulocytes_lymphoma_diffuse_Hep2 |
Association with transcript: | 35bp_to_NM_182649, uc002wlp.2_5end |
EntrezGene: | PCNA |
HGNC: | 8729 |
UniProt: | P12004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.39e-19 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.60e-46 | 235 |
disease of cellular proliferation | 2.56e-45 | 239 |
cell type cancer | 9.98e-23 | 143 |
organ system cancer | 1.59e-22 | 137 |
carcinoma | 5.15e-22 | 106 |
hematologic cancer | 3.73e-17 | 51 |
immune system cancer | 3.73e-17 | 51 |
leukemia | 8.08e-14 | 39 |
myeloid leukemia | 2.87e-10 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.