FFCP PHASE1:Hg19::chr20:6020237..6020248,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C548|description=CAGE_peak_at_chr20:6020237..6020248,-|id=chr20:6020237..6020248,-|ontology_enrichment_celltype=CL:1000497!7.04e-15!18;CL:0002518!7.04e-15!18;CL:0000077!1.44e-14!19;CL:1000449!1.98e-12!16;CL:1000507!7.44e-12!12;CL:1000494!7.44e-12!12;CL:0002681!7.81e-11!13;CL:0002584!7.81e-11!13;CL:0000239!1.29e-08!3;CL:1000615!1.29e-08!3;CL:0002306!1.29e-08!3;CL:0000066!4.40e-08!254;CL:0000213!6.64e-07!57;CL:0000215!6.64e-07!57|ontology_enrichment_celltype_v019=CL:0000077;5.09e-15;19|ontology_enrichment_celltype_v019_2=CL:0000077,5.27e-15,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:120!8.49e-13!27;DOID:4468!1.52e-12!2;DOID:193!7.86e-12!29;DOID:2394!5.04e-07!14;DOID:6193!6.88e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000058!8.20e-13!26;UBERON:0004211!1.98e-12!16;UBERON:0001285!1.98e-12!16;UBERON:0007684!1.98e-12!16;UBERON:0003220!1.98e-12!16;UBERON:0004208!1.98e-12!16;UBERON:0002113!2.13e-12!27;UBERON:0003918!2.13e-12!27;UBERON:0005095!2.13e-12!27;UBERON:0007687!2.13e-12!27;UBERON:0001851!2.48e-12!16;UBERON:0009773!7.44e-12!12;UBERON:0001231!7.44e-12!12;UBERON:0004810!7.44e-12!12;UBERON:0006555!1.15e-11!17;UBERON:0005103!1.15e-11!17;UBERON:0000083!1.15e-11!17;UBERON:0009201!1.15e-11!17;UBERON:0004819!1.15e-11!17;UBERON:0006553!1.15e-11!17;UBERON:0003074!1.15e-11!17;UBERON:0003060!1.15e-11!17;UBERON:0000080!5.48e-11!18;UBERON:0002120!5.48e-11!18;UBERON:0004875!5.48e-11!18;UBERON:0005721!5.48e-11!18;UBERON:0005754!5.48e-11!18;UBERON:0007297!5.48e-11!18;UBERON:0001225!7.81e-11!13;UBERON:0008987!7.81e-11!13;UBERON:0000489!2.81e-10!32;UBERON:0004876!7.83e-10!20;UBERON:0003887!2.45e-09!21;UBERON:0006853!1.29e-08!3;UBERON:0007685!1.29e-08!3;UBERON:0004134!1.29e-08!3;UBERON:0005172!1.47e-08!55;UBERON:0005173!1.47e-08!55;UBERON:0000353!3.14e-08!17;UBERON:0002294!1.39e-07!7;UBERON:0001173!1.39e-07!7;UBERON:0004912!1.39e-07!7;UBERON:0002417!1.50e-07!61;UBERON:0000916!1.50e-07!61;UBERON:0006554!3.71e-07!44;UBERON:0001008!5.68e-07!45;UBERON:0004913!7.29e-07!1;UBERON:0003703!7.29e-07!1;UBERON:0001174!7.29e-07!1;UBERON:0004914!7.29e-07!1;UBERON:0003064!9.75e-07!37|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0.871533458600294,2.99918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0.450772826991655,1.90402606084398,0,0,0.537052785212442,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.926404341482917,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:6020237..6020248,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C548 | |||
|description=CAGE_peak_at_chr20:6020237..6020248,- | |||
|id=chr20:6020237..6020248,- | |||
|ontology_enrichment_celltype=CL:1000497!7.04e-15!18;CL:0002518!7.04e-15!18;CL:0000077!1.44e-14!19;CL:1000449!1.98e-12!16;CL:1000507!7.44e-12!12;CL:1000494!7.44e-12!12;CL:0002681!7.81e-11!13;CL:0002584!7.81e-11!13;CL:0000239!1.29e-08!3;CL:1000615!1.29e-08!3;CL:0002306!1.29e-08!3;CL:0000066!4.40e-08!254;CL:0000213!6.64e-07!57;CL:0000215!6.64e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.09e-15;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.27e-15,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!8.49e-13!27;DOID:4468!1.52e-12!2;DOID:193!7.86e-12!29;DOID:2394!5.04e-07!14;DOID:6193!6.88e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000058!8.20e-13!26;UBERON:0004211!1.98e-12!16;UBERON:0001285!1.98e-12!16;UBERON:0007684!1.98e-12!16;UBERON:0003220!1.98e-12!16;UBERON:0004208!1.98e-12!16;UBERON:0002113!2.13e-12!27;UBERON:0003918!2.13e-12!27;UBERON:0005095!2.13e-12!27;UBERON:0007687!2.13e-12!27;UBERON:0001851!2.48e-12!16;UBERON:0009773!7.44e-12!12;UBERON:0001231!7.44e-12!12;UBERON:0004810!7.44e-12!12;UBERON:0006555!1.15e-11!17;UBERON:0005103!1.15e-11!17;UBERON:0000083!1.15e-11!17;UBERON:0009201!1.15e-11!17;UBERON:0004819!1.15e-11!17;UBERON:0006553!1.15e-11!17;UBERON:0003074!1.15e-11!17;UBERON:0003060!1.15e-11!17;UBERON:0000080!5.48e-11!18;UBERON:0002120!5.48e-11!18;UBERON:0004875!5.48e-11!18;UBERON:0005721!5.48e-11!18;UBERON:0005754!5.48e-11!18;UBERON:0007297!5.48e-11!18;UBERON:0001225!7.81e-11!13;UBERON:0008987!7.81e-11!13;UBERON:0000489!2.81e-10!32;UBERON:0004876!7.83e-10!20;UBERON:0003887!2.45e-09!21;UBERON:0006853!1.29e-08!3;UBERON:0007685!1.29e-08!3;UBERON:0004134!1.29e-08!3;UBERON:0005172!1.47e-08!55;UBERON:0005173!1.47e-08!55;UBERON:0000353!3.14e-08!17;UBERON:0002294!1.39e-07!7;UBERON:0001173!1.39e-07!7;UBERON:0004912!1.39e-07!7;UBERON:0002417!1.50e-07!61;UBERON:0000916!1.50e-07!61;UBERON:0006554!3.71e-07!44;UBERON:0001008!5.68e-07!45;UBERON:0004913!7.29e-07!1;UBERON:0003703!7.29e-07!1;UBERON:0001174!7.29e-07!1;UBERON:0004914!7.29e-07!1;UBERON:0003064!9.75e-07!37 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr20:6020237..6020248,- | |||
}} |
Revision as of 09:28, 12 September 2013
Short description: | p@chr20:6020237..6020248, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:6020237..6020248, - |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.27e-15 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.