FFCP PHASE1:Hg19::chr2:105467904..105467924,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000413121,ENST00000443988,ENST00000458253,uc002tck.1_5end|coexpression_cluster_id=C919|description=CAGE_peak_1_at_ENST00000413121_5end,CAGE_peak_1_at_ENST00000443988_5end,CAGE_peak_1_at_ENST00000458253_5end,CAGE_peak_1_at_uc002tck.1_5end|id=chr2:105467904..105467924,-|ontology_enrichment_celltype=CL:0000128!7.65e-10!7;CL:0000126!7.65e-10!7;CL:0000127!7.65e-10!7;CL:0002453!7.65e-10!7;CL:0002319!1.66e-09!25;CL:0002605!2.84e-07!3|ontology_enrichment_celltype_v019=CL:0002319;6.43e-10;25!CL:0000128;1.26e-09;7!CL:0000126;1.26e-09;7!CL:0000127;1.26e-09;7!CL:0002605;2.56e-09;3!CL:0000047;8.21e-07;2|ontology_enrichment_celltype_v019_2=CL:0002319,5.97e-10,25;CL:0000128,1.26e-09,7;CL:0000126,1.26e-09,7;CL:0000127,1.26e-09,7;CL:0002453,1.26e-09,7;CL:0002605,2.56e-09,3;CL:0000047,6.60e-09,8|ontology_enrichment_development_v019=UBERON:0006601;3.14e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.49e-76!57;UBERON:0005068!2.49e-76!57;UBERON:0006241!2.49e-76!57;UBERON:0007135!2.49e-76!57;UBERON:0001017!2.94e-75!82;UBERON:0005743!6.37e-71!86;UBERON:0002616!3.92e-67!59;UBERON:0000073!5.78e-67!94;UBERON:0001016!5.78e-67!94;UBERON:0000955!2.93e-62!69;UBERON:0006238!2.93e-62!69;UBERON:0002780!8.20e-58!41;UBERON:0001890!8.20e-58!41;UBERON:0006240!8.20e-58!41;UBERON:0001893!5.14e-57!34;UBERON:0002020!1.25e-56!34;UBERON:0003528!1.25e-56!34;UBERON:0003080!3.66e-56!42;UBERON:0002791!3.58e-55!33;UBERON:0001869!1.75e-53!32;UBERON:0003075!3.39e-51!86;UBERON:0007284!3.39e-51!86;UBERON:0002346!3.58e-48!90;UBERON:0000956!5.81e-42!25;UBERON:0000203!5.81e-42!25;UBERON:0007023!1.01e-37!115;UBERON:0003056!5.25e-37!61;UBERON:0002619!2.76e-36!22;UBERON:0001950!3.50e-33!20;UBERON:0004121!1.08e-32!169;UBERON:0000924!1.71e-31!173;UBERON:0006601!1.71e-31!173;UBERON:0000033!7.49e-31!123;UBERON:0000153!7.59e-30!129;UBERON:0007811!7.59e-30!129;UBERON:0003076!2.83e-20!15;UBERON:0003057!2.83e-20!15;UBERON:0000025!7.88e-19!194;UBERON:0004732!9.89e-18!13;UBERON:0004733!3.33e-16!12;UBERON:0002028!3.33e-16!12;UBERON:0007277!3.33e-16!12;UBERON:0002420!7.42e-16!9;UBERON:0007245!7.42e-16!9;UBERON:0010009!7.42e-16!9;UBERON:0010011!7.42e-16!9;UBERON:0000454!7.42e-16!9;UBERON:0002308!8.57e-16!9;UBERON:0000125!8.57e-16!9;UBERON:0004111!5.39e-14!241;UBERON:0000064!1.28e-13!219;UBERON:0009663!7.96e-13!7;UBERON:0000477!1.44e-12!286;UBERON:0002680!9.57e-12!9;UBERON:0001895!9.57e-12!9;UBERON:0010092!9.57e-12!9;UBERON:0000200!1.62e-11!6;UBERON:0001871!2.70e-11!7;UBERON:0002298!9.76e-11!8;UBERON:0002021!2.24e-10!5;UBERON:0001872!3.72e-10!5;UBERON:0000489!4.00e-10!32;UBERON:0000483!9.07e-10!309;UBERON:0000119!1.63e-09!312;UBERON:0000349!1.76e-09!5;UBERON:0000475!3.87e-09!365;UBERON:0000369!5.37e-08!4;UBERON:0002435!5.37e-08!4;UBERON:0000204!5.37e-08!4;UBERON:0010082!5.37e-08!4;UBERON:0002037!2.31e-07!6;UBERON:0006215!2.31e-07!6;UBERON:0000481!3.24e-07!347;UBERON:0002113!5.31e-07!27;UBERON:0003918!5.31e-07!27;UBERON:0005095!5.31e-07!27;UBERON:0007687!5.31e-07!27|ontology_enrichment_uberon_v019=UBERON:0001893;3.94e-66;34!UBERON:0003528;2.89e-65;34!UBERON:0002020;2.89e-65;34!UBERON:0002791;3.21e-65;32!UBERON:0001869;4.00e-65;32!UBERON:0000956;1.49e-56;25!UBERON:0000203;1.49e-56;25!UBERON:0002780;1.80e-53;41!UBERON:0001890;1.80e-53;41!UBERON:0000073;4.13e-53;53!UBERON:0002616;4.13e-53;53!UBERON:0002619;8.16e-49;22!UBERON:0001950;1.38e-44;20!UBERON:0000955;1.17e-35;68!UBERON:0001017;5.96e-33;75!UBERON:0001016;4.31e-28;83!UBERON:0000125;5.78e-21;9!UBERON:0002308;5.78e-21;9!UBERON:0002420;6.61e-21;9!UBERON:0007245;6.61e-21;9!UBERON:0010009;6.61e-21;9!UBERON:0010011;6.61e-21;9!UBERON:0000454;6.61e-21;9!UBERON:0004732;3.32e-20;13!UBERON:0004733;3.67e-18;12!UBERON:0002028;3.67e-18;12!UBERON:0009663;6.95e-17;7!UBERON:0000200;5.26e-15;6!UBERON:0002298;6.68e-14;6!UBERON:0002021;1.60e-13;5!UBERON:0001872;3.14e-13;5!UBERON:0007023;1.43e-12;114!UBERON:0001871;1.62e-12;6!UBERON:0002680;2.53e-12;9!UBERON:0001895;2.53e-12;9!UBERON:0000349;3.31e-12;5!UBERON:0000369;2.89e-10;4!UBERON:0002435;2.89e-10;4!UBERON:0000204;2.89e-10;4!UBERON:0011216;9.24e-10;132!UBERON:0001870;2.95e-08;3!UBERON:0005383;6.65e-08;3!UBERON:0005382;6.65e-08;3!UBERON:0006947;8.08e-08;3!UBERON:0004054;8.08e-08;3!UBERON:0000988;8.18e-08;3!UBERON:0001896;9.34e-08;3!UBERON:0005290;9.34e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.41e-93,53;UBERON:0002616,9.41e-93,53;UBERON:0001049,2.18e-91,56;UBERON:0005068,2.18e-91,56;UBERON:0006241,2.18e-91,56;UBERON:0007135,2.18e-91,56;UBERON:0001017,9.58e-88,81;UBERON:0001016,1.07e-80,89;UBERON:0000955,8.08e-79,68;UBERON:0006238,8.08e-79,68;UBERON:0001893,3.21e-77,34;UBERON:0003528,1.08e-76,34;UBERON:0002020,1.08e-76,34;UBERON:0002780,5.43e-75,41;UBERON:0001890,5.43e-75,41;UBERON:0003080,5.43e-75,41;UBERON: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0929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,7.72320640850424,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,13.7605999825393,0,4.82739580355494,101.233360158968,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,1.65833887891756,15.5149493792843,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENST00000413121,p1@ENST00000443988,p1@ENST00000458253,p1@uc002tck.1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000413121,ENST00000443988,ENST00000458253,uc002tck.1_5end | |||
|coexpression_cluster_id=C919 | |||
|description=CAGE_peak_1_at_ENST00000413121_5end,CAGE_peak_1_at_ENST00000443988_5end,CAGE_peak_1_at_ENST00000458253_5end,CAGE_peak_1_at_uc002tck.1_5end | |||
|id=chr2:105467904..105467924,- | |||
|ontology_enrichment_celltype=CL:0000128!7.65e-10!7;CL:0000126!7.65e-10!7;CL:0000127!7.65e-10!7;CL:0002453!7.65e-10!7;CL:0002319!1.66e-09!25;CL:0002605!2.84e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.43e-10;25!CL:0000128;1.26e-09;7!CL:0000126;1.26e-09;7!CL:0000127;1.26e-09;7!CL:0002605;2.56e-09;3!CL:0000047;8.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.97e-10,25;CL:0000128,1.26e-09,7;CL:0000126,1.26e-09,7;CL:0000127,1.26e-09,7;CL:0002453,1.26e-09,7;CL:0002605,2.56e-09,3;CL:0000047,6.60e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.14e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43235809076436,0.408001382488506,6.58254915103984,222.1191260137,57.2135096804656,87.6287624371724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,158.046856266372,119.728665549012,133.778964610541,256.802434757557,143.536219121962,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35359883872224,4.23584354074281,0,4.38417673959782,5.27758144464378,0,0,0,0,0,0,1.78413391131527,0.831076008928724,0.447749509444357,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04980416073495,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,5.62677665642051,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,4.84666373047609,5.84439018419663,55.8918634403344,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,2.65722415744152,6.15041836989581,0,2.21158519862449,2.06883333267483,4.16832254592548,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,4.92028270758942,0,5.62234669740814,0,0,0,3.55125962564451,0,92.1279012507775,0.126373159256976,0,0,0,0,0,0,5.40758137456606,0,0,0,0,2.27144668714639,0,0,0,0,0,0,0.451961481561065,0,0,8.04047108639659,0,0,0,0,0,0,2.9171149636534,0,0,0,0,0,0,0,1.20084057741958,8.07741735462759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,7.62739074224823,0,0,0,0,0,6.92544945901481,0,8.90504492480939,16.4707406743894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,6.74386268887719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.44052529803926,9.51451073369399,2.29363678276028,4.8808782676215,2.73224172942087,0,0,0,0,0,0.936669811613763,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0928658390763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,8.86363306331141,7.08482881627925,11.9725394292863,5.9483745629819,144.185010238823,7.12319700381444,5.65164759711479,4.28308260777463,0,0,0,0,0,0,0,0,0,0,0,0,0,9.86048735428562,1.56215619722769,9.30090584255328,10.5270244921885,199.098830482632,0,0,0,0,0,0.336283722218824,0,0,0,0,0,3.87427477967941,7.69541450685334,0,0,0,2.67096502857203,0,1.82631744101899,0,2.38875843943525,0,0,0,0,0,0,0,0,0,0,0,4.23387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,7.72320640850424,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,13.7605999825393,0,4.82739580355494,101.233360158968,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,1.65833887891756,15.5149493792843,0,0,0,0.0620747142958579,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000413121,p1@ENST00000443988,p1@ENST00000458253,p1@uc002tck.1 | |||
}} |
Revision as of 12:48, 12 September 2013
Short description: | p1@ENST00000413121, p1@ENST00000443988, p1@ENST00000458253, p1@uc002tck.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000413121_5end, CAGE_peak_1_at_ENST00000443988_5end, CAGE_peak_1_at_ENST00000458253_5end, CAGE_peak_1_at_uc002tck.1_5end |
Coexpression cluster: | C919_Neurons_Neural_parietal_Astrocyte_duodenum_occipital_temporal |
Association with transcript: | 0bp_to_ENST00000413121, ENST00000443988, ENST00000458253, uc002tck.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.97e-10 | 25 |
oligodendrocyte | 1.26e-09 | 7 |
macroglial cell | 1.26e-09 | 7 |
astrocyte | 1.26e-09 | 7 |
oligodendrocyte precursor cell | 1.26e-09 | 7 |
astrocyte of the cerebral cortex | 2.56e-09 | 3 |
neuronal stem cell | 6.60e-09 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.