FFCP PHASE1:Hg19::chr2:109605588..109605606,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10913|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2895|TSSclassifier=S|UniProt=E9PC98|association_with_transcript=118bp_to_ENST00000409271_5end|coexpression_cluster_id=C525|description=CAGE_peak_2_at_EDAR_5end|id=chr2:109605588..109605606,-|ontology_enrichment_celltype=CL:0002076!7.43e-11!43;CL:0000223!1.68e-10!59;CL:0002251!2.19e-08!21|ontology_enrichment_celltype_v019=CL:1001319;5.85e-14;1!CL:1000600;5.85e-14;1!CL:0000083;1.57e-13;4!CL:1000415;1.05e-07;2|ontology_enrichment_celltype_v019_2=CL:1001319,5.85e-14,1;CL:1000600,5.85e-14,1;CL:0000083,1.43e-13,4;CL:1000415,1.05e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1749!3.68e-14!14;DOID:305!4.47e-07!106|ontology_enrichment_disease_v019=DOID:1749;1.57e-14;14!DOID:3151;5.85e-14;1!DOID:3149;5.85e-14;1!DOID:1793;1.57e-13;4!DOID:170;2.50e-09;6!DOID:4929;9.25e-08;2!DOID:3451;1.27e-07;2!DOID:4159;1.27e-07;2!DOID:0060122;1.27e-07;2!DOID:4074;1.93e-07;2!DOID:4905;1.93e-07;2!DOID:3498;1.93e-07;2|ontology_enrichment_disease_v019_2=DOID:1749,1.46e-14,14;DOID:3151,7.55e-14,1;DOID:3149,7.55e-14,1;DOID:1793,1.43e-13,4;DOID:170,2.35e-09,6;DOID:305,1.42e-08,106;DOID:4929,9.25e-08,2;DOID:3451,1.45e-07,2;DOID:4159,1.45e-07,2;DOID:0060122,1.45e-07,2;DOID:4074,1.75e-07,2;DOID:4905,1.75e-07,2;DOID:3498,1.75e-07,2|ontology_enrichment_uberon=UBERON:0005409!7.99e-15!35;UBERON:0004119!3.96e-14!169;UBERON:0000925!3.96e-14!169;UBERON:0006595!3.96e-14!169;UBERON:0000160!7.03e-13!27;UBERON:0000344!8.81e-13!12;UBERON:0001007!1.16e-11!155;UBERON:0001555!1.16e-11!155;UBERON:0007026!1.16e-11!155;UBERON:0001052!8.31e-11!4;UBERON:0004921!1.48e-10!129;UBERON:0004185!1.48e-10!129;UBERON:0001046!2.28e-09!19;UBERON:0000974!7.52e-09!10;UBERON:0004907!1.23e-08!5;UBERON:0003350!2.23e-08!5;UBERON:0000059!4.48e-08!11;UBERON:0000077!3.79e-07!130|ontology_enrichment_uberon_v019=UBERON:0000997;5.85e-14;1!UBERON:0004645;5.85e-14;1!UBERON:0005056;5.85e-14;1!UBERON:0004176;5.85e-14;1!UBERON:0001256;5.85e-14;1!UBERON:0001259;5.85e-14;1!UBERON:0002372;1.33e-13;1!UBERON:0001961;1.33e-13;1!UBERON:0001744;1.33e-13;1!UBERON:0001042;1.33e-13;1!UBERON:0001735;1.33e-13;1!UBERON:0002075;1.74e-11;18!UBERON:0000974;4.03e-09;6!UBERON:0005409;6.63e-09;22!UBERON:0004921;1.08e-07;33!UBERON:0001255;1.27e-07;2!UBERON:0001556;1.27e-07;2!UBERON:0000341;1.93e-07;2!UBERON:0006562;1.93e-07;2!UBERON:0000160;9.39e-07;17|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.53e-14,1;UBERON:0005056,4.53e-14,1;UBERON:0004645,5.85e-14,1;UBERON:0001256,5.85e-14,1;UBERON:0001259,5.85e-14,1;UBERON:0002372,1.61e-13,1;UBERON:0001961,1.61e-13,1;UBERON:0001744,1.61e-13,1;UBERON:0001735,1.61e-13,1;UBERON:0002075,1.67e-11,18;UBERON:0005409,6.70e-08,25;UBERON:0001255,1.28e-07,2;UBERON:0001556,1.28e-07,2;UBERON:0000341,1.54e-07,2;UBERON:0000160,9.58e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0,0,0,0.621984346622316,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.184161977871793,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02276550886375,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0.216388639742091,0,0.353830258013357,1.22206028986725,0,0,0,0,0,0,0,1.76098157038881,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,2.6457947301882,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,4.88878456837007,0,0.213452994739353,0,2.4495370916198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,2.0126081255956,0.315222829196793,0.996637174564964,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2895 | |||
|TSSclassifier=S | |||
|UniProt=E9PC98 | |||
|association_with_transcript=118bp_to_ENST00000409271_5end | |||
|coexpression_cluster_id=C525 | |||
|description=CAGE_peak_2_at_EDAR_5end | |||
|id=chr2:109605588..109605606,- | |||
|ontology_enrichment_celltype=CL:0002076!7.43e-11!43;CL:0000223!1.68e-10!59;CL:0002251!2.19e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:1001319;5.85e-14;1!CL:1000600;5.85e-14;1!CL:0000083;1.57e-13;4!CL:1000415;1.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.85e-14,1;CL:1000600,5.85e-14,1;CL:0000083,1.43e-13,4;CL:1000415,1.05e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.68e-14!14;DOID:305!4.47e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.57e-14;14!DOID:3151;5.85e-14;1!DOID:3149;5.85e-14;1!DOID:1793;1.57e-13;4!DOID:170;2.50e-09;6!DOID:4929;9.25e-08;2!DOID:3451;1.27e-07;2!DOID:4159;1.27e-07;2!DOID:0060122;1.27e-07;2!DOID:4074;1.93e-07;2!DOID:4905;1.93e-07;2!DOID:3498;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.46e-14,14;DOID:3151,7.55e-14,1;DOID:3149,7.55e-14,1;DOID:1793,1.43e-13,4;DOID:170,2.35e-09,6;DOID:305,1.42e-08,106;DOID:4929,9.25e-08,2;DOID:3451,1.45e-07,2;DOID:4159,1.45e-07,2;DOID:0060122,1.45e-07,2;DOID:4074,1.75e-07,2;DOID:4905,1.75e-07,2;DOID:3498,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!7.99e-15!35;UBERON:0004119!3.96e-14!169;UBERON:0000925!3.96e-14!169;UBERON:0006595!3.96e-14!169;UBERON:0000160!7.03e-13!27;UBERON:0000344!8.81e-13!12;UBERON:0001007!1.16e-11!155;UBERON:0001555!1.16e-11!155;UBERON:0007026!1.16e-11!155;UBERON:0001052!8.31e-11!4;UBERON:0004921!1.48e-10!129;UBERON:0004185!1.48e-10!129;UBERON:0001046!2.28e-09!19;UBERON:0000974!7.52e-09!10;UBERON:0004907!1.23e-08!5;UBERON:0003350!2.23e-08!5;UBERON:0000059!4.48e-08!11;UBERON:0000077!3.79e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.85e-14;1!UBERON:0004645;5.85e-14;1!UBERON:0005056;5.85e-14;1!UBERON:0004176;5.85e-14;1!UBERON:0001256;5.85e-14;1!UBERON:0001259;5.85e-14;1!UBERON:0002372;1.33e-13;1!UBERON:0001961;1.33e-13;1!UBERON:0001744;1.33e-13;1!UBERON:0001042;1.33e-13;1!UBERON:0001735;1.33e-13;1!UBERON:0002075;1.74e-11;18!UBERON:0000974;4.03e-09;6!UBERON:0005409;6.63e-09;22!UBERON:0004921;1.08e-07;33!UBERON:0001255;1.27e-07;2!UBERON:0001556;1.27e-07;2!UBERON:0000341;1.93e-07;2!UBERON:0006562;1.93e-07;2!UBERON:0000160;9.39e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.53e-14,1;UBERON:0005056,4.53e-14,1;UBERON:0004645,5.85e-14,1;UBERON:0001256,5.85e-14,1;UBERON:0001259,5.85e-14,1;UBERON:0002372,1.61e-13,1;UBERON:0001961,1.61e-13,1;UBERON:0001744,1.61e-13,1;UBERON:0001735,1.61e-13,1;UBERON:0002075,1.67e-11,18;UBERON:0005409,6.70e-08,25;UBERON:0001255,1.28e-07,2;UBERON:0001556,1.28e-07,2;UBERON:0000341,1.54e-07,2;UBERON:0000160,9.58e-07,17 | |||
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|short_description=p2@EDAR | |||
}} |
Revision as of 12:55, 12 September 2013
Short description: | p2@EDAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EDAR_5end |
Coexpression cluster: | C525_tubular_vagina_cervix_rectum_Placental_colon_Hair |
Association with transcript: | 118bp_to_ENST00000409271_5end |
EntrezGene: | EDAR |
HGNC: | 2895 |
UniProt: | E9PC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.85e-14 | 1 |
lower urinary tract cell | 5.85e-14 | 1 |
epithelial cell of pancreas | 1.43e-13 | 4 |
epithelial cell of gall bladder | 1.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 4.53e-14 | 1 |
external female genitalia | 4.53e-14 | 1 |
urinary bladder urothelium | 5.85e-14 | 1 |
wall of urinary bladder | 5.85e-14 | 1 |
mucosa of urinary bladder | 5.85e-14 | 1 |
tonsil | 1.61e-13 | 1 |
mucosa-associated lymphoid tissue | 1.61e-13 | 1 |
lymphoid tissue | 1.61e-13 | 1 |
tonsillar ring | 1.61e-13 | 1 |
viscus | 1.67e-11 | 18 |
gastrointestinal system | 6.70e-08 | 25 |
urinary bladder | 1.28e-07 | 2 |
lower urinary tract | 1.28e-07 | 2 |
throat | 1.54e-07 | 2 |
intestine | 9.58e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.46e-14 | 14 |
skin squamous cell carcinoma | 7.55e-14 | 1 |
keratoacanthoma | 7.55e-14 | 1 |
pancreatic cancer | 1.43e-13 | 4 |
endocrine gland cancer | 2.35e-09 | 6 |
carcinoma | 1.42e-08 | 106 |
tubular adenocarcinoma | 9.25e-08 | 2 |
skin carcinoma | 1.45e-07 | 2 |
skin cancer | 1.45e-07 | 2 |
integumentary system cancer | 1.45e-07 | 2 |
pancreas adenocarcinoma | 1.75e-07 | 2 |
pancreatic carcinoma | 1.75e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.75e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.