FFCP PHASE1:Mm9::chr10:109340886..109340901,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=260315|HGNC=|UniProt=|association_with_transcript=30bp_to_ENSMUST00000160159_5end|description=CAGE_peak_5_at_Nav3_5end|id=chr10:109340886..109340901,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000217,2.94e-15,2;CL:0000328,2.94e-15,2;CL:0002573,2.94e-15,2;CL:0002376,2.94e-15,2;CL:0000218,2.94e-15,2;CL:0000692,2.94e-15,2;CL:0002377,2.94e-15,2;CL:0002375,2.94e-15,2;CL:0000215,1.75e-10,3;CL:0000349,9.30e-10,3;CL:0000351,9.30e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.30e-10,3;UBERON:0000307,9.30e-10,3;UBERON:0007010,9.30e-10,3;UBERON:0002102,2.89e-09,7;UBERON:0004710,2.89e-09,7;UBERON:0005419,2.89e-09,7;UBERON:0005417,2.89e-09,7;UBERON:0005729,2.89e-09,7;UBERON:0010708,3.56e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0.263772575460388,0,0,0,0,0,0.294628585473668,0,0,5.83091688665517,4.00529268565963,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.433798070759735,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,4.8401626853889,0,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0,0.281105173679186,1.03481348295606,0,0,0,0,1.11218899690239,1.39300866608867,3.90986059175093,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.126473074248515,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.983528546038072,0,0,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,0.42366414172764,0,0.32977250588296,0.645857706783622,1.5078231232039,0.596861720015682,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.495920734352016,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0,1.43542170575161,1.00730769818447,0,0.563047426353546,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.64183841918363,2.02157769411038,0.50695859978048,0,0.37456602987953,0.256100609619477,0.34461281373368,0.476293691283074,0.463537303779422,0.964546102318525,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.188218760830661,0.338458431566706,0.914639864363863,0.263069711437843,0.407412341537585,0,0.593175090620871,0.591026894253381,0.409231043169689,0.619747364743864,0.771626443924566,0.749431733813838,0,1.28922632428979,0.57386499620653,0.882365676478062,0.231867835620421|short_description=p5@Nav3}} | ||
|EntrezGene=260315 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENSMUST00000160159_5end | |||
|description=CAGE_peak_5_at_Nav3_5end | |||
|id=chr10:109340886..109340901,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,2.94e-15,2;CL:0000328,2.94e-15,2;CL:0002573,2.94e-15,2;CL:0002376,2.94e-15,2;CL:0000218,2.94e-15,2;CL:0000692,2.94e-15,2;CL:0002377,2.94e-15,2;CL:0002375,2.94e-15,2;CL:0000215,1.75e-10,3;CL:0000349,9.30e-10,3;CL:0000351,9.30e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.30e-10,3;UBERON:0000307,9.30e-10,3;UBERON:0007010,9.30e-10,3;UBERON:0002102,2.89e-09,7;UBERON:0004710,2.89e-09,7;UBERON:0005419,2.89e-09,7;UBERON:0005417,2.89e-09,7;UBERON:0005729,2.89e-09,7;UBERON:0010708,3.56e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0.263772575460388,0,0,0,0,0,0.294628585473668,0,0,5.83091688665517,4.00529268565963,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.433798070759735,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,4.8401626853889,0,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0,0.281105173679186,1.03481348295606,0,0,0,0,1.11218899690239,1.39300866608867,3.90986059175093,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.126473074248515,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0.983528546038072,0,0,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,0.42366414172764,0,0.32977250588296,0.645857706783622,1.5078231232039,0.596861720015682,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.495920734352016,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0,1.43542170575161,1.00730769818447,0,0.563047426353546,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0,0,0.222246727801615,0.618105171716683,0.64183841918363,2.02157769411038,0.50695859978048,0,0.37456602987953,0.256100609619477,0.34461281373368,0.476293691283074,0.463537303779422,0.964546102318525,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.188218760830661,0.338458431566706,0.914639864363863,0.263069711437843,0.407412341537585,0,0.593175090620871,0.591026894253381,0.409231043169689,0.619747364743864,0.771626443924566,0.749431733813838,0,1.28922632428979,0.57386499620653,0.882365676478062,0.231867835620421 | |||
|short_description=p5@Nav3 | |||
}} |
Revision as of 15:41, 12 September 2013
Short description: | p5@Nav3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nav3_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENSMUST00000160159_5end |
EntrezGene: | Nav3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 2.94e-15 | 2 |
myelin accumulating cell | 2.94e-15 | 2 |
Schwann cell | 2.94e-15 | 2 |
non-myelinating Schwann cell | 2.94e-15 | 2 |
myelinating Schwann cell;;Schwann cell | 2.94e-15 | 2 |
terminal Schwann cell | 2.94e-15 | 2 |
immature Schwann cell | 2.94e-15 | 2 |
Schwann cell precursor | 2.94e-15 | 2 |
barrier cell | 1.75e-10 | 3 |
extraembryonic cell | 9.30e-10 | 3 |
trophoblast cell | 9.30e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 9.30e-10 | 3 |
blastula | 9.30e-10 | 3 |
cleaving embryo | 9.30e-10 | 3 |
forelimb | 2.89e-09 | 7 |
pectoral appendage | 2.89e-09 | 7 |
pectoral appendage bud | 2.89e-09 | 7 |
forelimb bud | 2.89e-09 | 7 |
forelimb/pectoral fin field | 2.89e-09 | 7 |
pectoral complex | 3.56e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.