FFCP PHASE1:Hg19::chr2:209119769..209119776,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3417|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5382|TSSclassifier=S|UniProt=|association_with_transcript=8bp_to_ENST00000462386_5end|description=CAGE_peak_4_at_IDH1_5end|id=chr2:209119769..209119776,-|ontology_enrichment_celltype=CL:0002321!5.71e-11!248;CL:0000220!1.65e-10!246;CL:0000055!1.25e-08!180;CL:0000548!3.77e-08!679;CL:0000004!3.77e-08!679;CL:0000255!3.77e-08!679;CL:0000012!1.31e-07!682|ontology_enrichment_celltype_v019=CL:0000235;9.84e-07;6|ontology_enrichment_celltype_v019_2=CL:0000235,8.89e-07,6|ontology_enrichment_development_v019=UBERON:0009497;2.58e-07;13!UBERON:0004161;9.89e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002107;3.16e-08;19!UBERON:0006925;3.16e-08;19!UBERON:0002423;3.91e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0003929,3.00e-08,54;UBERON:0008835,4.26e-08,22;UBERON:0003894,4.26e-08,22;UBERON:0002107,5.15e-08,19;UBERON:0006925,5.15e-08,19;UBERON:0008836,5.15e-08,19;UBERON:0009497,7.47e-08,25;UBERON:0000015,7.47e-08,25;UBERON:0002423,7.47e-08,25;UBERON:0006235,7.47e-08,25;UBERON:0004161,7.47e-08,25;UBERON:0007499,7.78e-08,25;UBERON:0009854,1.30e-07,23;UBERON:0009856,2.08e-07,26|phase1_expression=0.54503513781167,3.42560838225573,0.704772020479856,0,0.446961094427288,0.872338524100369,5.06599756336621,0,3.3954131665979,0,0,0.218441372130172,0,0.74259811776028,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0.547497700291537,0.502170558379211,0.152826811495903,0,0.157421562627358,0,0,0.154816123316076,0,0.30120591877825,0,0.0774672005803016,0,0.293600439334847,0,0,0.217010870715852,8.06095707263728,6.47787332037959,6.18181362322048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0.633765858935825,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,1.91793842765295,0,0.50133791063589,0.724232594804119,0,0,0.850813354476611,1.77383517970051,0.614843499851882,0.261958150995425,0,0,6.16640047943898,5.04976238167875,3.0580330919339,0,0,0,1.78886166630035,0.860234595106124,0.694281003215189,0,0,0,0,0.775250277507987,0.71153252537342,0.66944122552934,1.20848795132744,0.760272105718513,1.22031028774085,0.367663080345869,0.81014194788176,1.25019619597712,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.886413581652058,1.72131935057184,2.0078563452417,0.709336764396714,0.560677600142307,1.06748995729705,0.74000264525148,1.8672662123986,1.48181739276657,1.63461903113459,0.605429710579726,0,0,0.312160076830321,0.570471821544449,0.747243402759005,1.17434498643765,0.161872944368132,0.421352420106746,0.816616685019573,0.491337269247072,0.516628905878827,0,0.494533858557114,0.910161361938026,0,0.505008341862199,1.25118519871964,1.10825646193673,0.438977620880838,0,0.150238058906597,1.02088964844019,0.538168907066586,0.213557388818567,0,0.300091096084402,0.412210116953756,0.515281080091258,0.18611685633159,0.506328996723799,0.292311015483596,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.302256294682921,0.169560592310488,1.93260853163297,1.36373060295417,0.860413786167011,0.975789649036763,0.927708378250397,1.2781333715647,1.45125477021519,1.26160425437814,3.28479623168247,0,1.28648187638577,0,0,0,0.354920400119532,1.01150814046861,0.241011029883482,1.10293972732394,0.435758888184812,0.949082476444386,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0.4115740113314,0,3.80265104465493,0,2.36315962672562,0,3.07471096357784,1.20097467208968,0.658501712451753,0,0.100528972411631,0.462942225792648,0.325808305310325,1.03993478527958,0,1.15930404975077,1.40890433082986,0.433099343283221,0.462985512576611,0.190254152234598,0,0.858486162094873,5.17055712783534,1.63802985597466,2.82399208348584,0.93733833986777,0.503946384596579,0.992425680696705,0.179117045405697,0.290633938513962,0,3.4486426652716,1.32072651019839,0,0,0,0.888970520090367,0.381988425558278,0,1.71072446022705,0.205654985406647,0.600686115687835,0.571652865261156,0.112131084345361,0.87192013766656,0.2933531432838,0.517086863031111,0,0,0.531876233169741,2.08014873822732,0.514414748524284,0,0.266422179016099,1.00084595560703,0.542621605391443,0.823240336780769,0.325736184293735,1.06617584622764,0,2.71295439353627,3.48613383440118,0.599837947092342,1.2162378064119,3.01354254859276,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0,0.895304816199478,0,0,0,0,0.76228387266739,1.30139853857622,2.31986643833309,1.50764638800914,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.781952530212746,0.195801157462741,0,0,0,0,0,0,0,0.744323423456331,0.920771839728375,0.280660094433074,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5382 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000462386_5end | |||
|description=CAGE_peak_4_at_IDH1_5end | |||
|id=chr2:209119769..209119776,- | |||
|ontology_enrichment_celltype=CL:0002321!5.71e-11!248;CL:0000220!1.65e-10!246;CL:0000055!1.25e-08!180;CL:0000548!3.77e-08!679;CL:0000004!3.77e-08!679;CL:0000255!3.77e-08!679;CL:0000012!1.31e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000235;9.84e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.89e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.58e-07;13!UBERON:0004161;9.89e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.16e-08;19!UBERON:0006925;3.16e-08;19!UBERON:0002423;3.91e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,3.00e-08,54;UBERON:0008835,4.26e-08,22;UBERON:0003894,4.26e-08,22;UBERON:0002107,5.15e-08,19;UBERON:0006925,5.15e-08,19;UBERON:0008836,5.15e-08,19;UBERON:0009497,7.47e-08,25;UBERON:0000015,7.47e-08,25;UBERON:0002423,7.47e-08,25;UBERON:0006235,7.47e-08,25;UBERON:0004161,7.47e-08,25;UBERON:0007499,7.78e-08,25;UBERON:0009854,1.30e-07,23;UBERON:0009856,2.08e-07,26 | |||
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| |||
|short_description=p4@IDH1 | |||
}} |
Revision as of 16:17, 12 September 2013
Short description: | p4@IDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_IDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000462386_5end |
EntrezGene: | IDH1 |
HGNC: | 5382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gut epithelium | 3.00e-08 | 54 |
hepatic diverticulum | 4.26e-08 | 22 |
liver primordium | 4.26e-08 | 22 |
liver | 5.15e-08 | 19 |
digestive gland | 5.15e-08 | 19 |
liver bud | 5.15e-08 | 19 |
epithelium of foregut-midgut junction | 7.47e-08 | 25 |
anatomical boundary | 7.47e-08 | 25 |
hepatobiliary system | 7.47e-08 | 25 |
foregut-midgut junction | 7.47e-08 | 25 |
septum transversum | 7.47e-08 | 25 |
epithelial sac | 7.78e-08 | 25 |
digestive tract diverticulum | 1.30e-07 | 23 |
sac | 2.08e-07 | 26 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.