FFCP PHASE1:Mm9::chr10:28749875..28749924,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=308|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:28749875..28749924,+|id=chr10:28749875..28749924,+|ontology_enrichment_celltype=CL:0000548!1.52e-27!115;CL:0000004!1.52e-27!115;CL:0000255!1.52e-27!115;CL:0000144!1.32e-26!121;CL:0000012!1.32e-26!121;CL:0002371!4.11e-25!118;CL:0000063!3.01e-23!66;CL:0000034!6.46e-15!97;CL:0000219!3.53e-14!54;CL:0000723!2.20e-12!91;CL:0000048!2.20e-12!91;CL:0002320!2.62e-12!46;CL:0000134!2.62e-12!46;CL:0000988!2.61e-11!32;CL:0002032!2.61e-11!32;CL:0000037!2.61e-11!32;CL:0000566!2.61e-11!32;CL:0000837!2.61e-11!32;CL:0002321!3.53e-11!70;CL:0000220!3.53e-11!70;CL:0000066!5.23e-11!25;CL:0002031!2.24e-10!25;CL:0002076!4.10e-09!15;CL:0000223!1.65e-08!20;CL:0000738!4.05e-08!17;CL:0002087!4.05e-08!17|ontology_enrichment_celltype_v019_2=CL:0000219,9.14e-25,54;CL:0002320,7.53e-21,46;CL:0000134,7.53e-21,46;CL:0000988,2.04e-18,32;CL:0002032,2.04e-18,32;CL:0000037,2.04e-18,32;CL:0000837,2.04e-18,32;CL:0000034,6.04e-18,97;CL:0000066,9.50e-18,25;CL:0002031,1.93e-16,25;CL:0000723,3.12e-14,91;CL:0000048,3.12e-14,91;CL:0002076,3.45e-14,15;CL:0000223,1.48e-13,20;CL:0000738,1.70e-11,17;CL:0002087,1.70e-11,17;CL:0000049,4.79e-11,19;CL:0002321,1.44e-10,70;CL:0000838,1.99e-09,12;CL:0000763,6.78e-09,16;CL:0000791,8.03e-09,9;CL:0000789,8.03e-09,9;CL:0002420,8.03e-09,9;CL:0002419,8.03e-09,9;CL:0000790,8.03e-09,9;CL:0000084,9.17e-09,11;CL:0000827,9.17e-09,11;CL:0000542,1.90e-08,13;CL:0000051,1.90e-08,13;CL:0000839,2.56e-08,13;CL:0002563,3.50e-08,9;CL:0002251,3.50e-08,9;CL:0000624,5.94e-08,8;CL:0000075,2.05e-07,7;CL:0000473,6.70e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.62e-12!46;UBERON:0000344!3.30e-08!15;UBERON:0001242!6.31e-07!13;UBERON:0000060!6.31e-07!13;UBERON:0001262!6.31e-07!13;UBERON:0004786!6.31e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.53e-21,46;UBERON:0000344,2.41e-11,15;UBERON:0000485,6.14e-10,11;UBERON:0001242,2.90e-09,13;UBERON:0001262,2.90e-09,13;UBERON:0004786,2.90e-09,13;UBERON:0003350,3.50e-08,9;UBERON:0004808,3.50e-08,9;UBERON:0001277,3.50e-08,9;UBERON:0002371,3.87e-08,16;UBERON:0001474,3.41e-07,22;UBERON:0004765,3.41e-07,22;UBERON:0001434,3.41e-07,22|phase1_expression=8.64803774365887,4.88565570695105,6.3699893514535,15.4256747766483,12.0214975187123,6.21153306073992,24.9965525437212,8.65126267058561,5.06839399746,8.42632294759177,18.8339765048055,13.5612670292072,6.84802919724823,7.16847299835779,0.333109761815663,9.71881283471165,14.6907994406911,8.3597473819933,8.08975158273859,7.63901373236454,1.02051948181284,0.496454756004426,25.8587791247546,22.5589316138703,19.0409703285751,9.18771142584032,8.18447792702242,6.89507944594845,15.3918969759663,3.52842181663903,5.32153225572731,7.62036808151557,0,15.8481681015439,4.62162591602039,4.3221007793208,3.67504841272264,0,0,0,0,0,0,0.629484089877886,0.304130793658544,0.550640256485045,3.12956537739216,1.96222640742402,1.97717564461025,1.55543919259427,1.53985063787899,0,6.20795642413625,8.70434570413613,9.74672017513146,1.54355661621568,0.573066879877513,1.03134418455488,0.404632921719196,2.11596391708813,3.1691570175309,1.69422266034566,0.889294796111139,1.3498495759221,0,2.1314403448383,2.69640099466564,4.61061966385865,0.622137673850866,0.540023753326763,1.47227472945967,1.14260393761521,0.883474163806454,1.46988959057945,0.670918297127655,0,1.10115880999389,0.766124028511126,0.614426133024974,1.71452174049252,0.365950574409639,1.04182674111352,0.837548997004143,0.56276261003168,0.61119299110724,0.589257170947335,0.569486723196412,0.372798891650601,14.9180600866373,15.6433129421046,7.53647670624362,16.3480536626463,1.3599426674155,2.15881276655127,0,0.448026887097336,0.561777680527007,0,20.0035223544209,30.0338638333789,15.0702459161048,26.9485602570067,15.2883143823987,7.11066703153331,17.9687564039308,22.0423082963336,19.2099289105618,0.68510327831436,0,1.33597925158342,0.867426633830679,0.304465478312141,1.15307748628029,1.50722640552623,0.587943535678524,0.753999547978053,0,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0.292780797011547,0.209446706813455,0,6.23038647430785,11.9980546198682,4.82866862877646,0.449371918214468,0.457500602818626,0.376963056338593,0.695297280769106,0.255715457330331,0,0.162241263067758,0.407357455401265,0.497627882440372,3.79084137650512,0.210441855886474,0.260240885925407,1.83921683546778,0.540186389416048,0.30140963567143,0.136072998302656,0.12811372028485,0.655912071918102,0,0.431135985865684,0.567318240503458,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.796137067273973,2.1066395619397,16.2129181482271,0,0.414251545071004,0,0.900310307305074,0.710234206755631,0,0.154267112887378,0,0.536546802799238,0.583826711835847,0.329119699826961,0.32833492815819,0.324275238183423,0.438599962275997,0,0.671032093801859,0.630869845692382,0.308713837137853,0.991256348951394,0.528901133327089,0.426576501070468,0.464473343720877,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=308 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:28749875..28749924,+ | |||
|id=chr10:28749875..28749924,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.52e-27!115;CL:0000004!1.52e-27!115;CL:0000255!1.52e-27!115;CL:0000144!1.32e-26!121;CL:0000012!1.32e-26!121;CL:0002371!4.11e-25!118;CL:0000063!3.01e-23!66;CL:0000034!6.46e-15!97;CL:0000219!3.53e-14!54;CL:0000723!2.20e-12!91;CL:0000048!2.20e-12!91;CL:0002320!2.62e-12!46;CL:0000134!2.62e-12!46;CL:0000988!2.61e-11!32;CL:0002032!2.61e-11!32;CL:0000037!2.61e-11!32;CL:0000566!2.61e-11!32;CL:0000837!2.61e-11!32;CL:0002321!3.53e-11!70;CL:0000220!3.53e-11!70;CL:0000066!5.23e-11!25;CL:0002031!2.24e-10!25;CL:0002076!4.10e-09!15;CL:0000223!1.65e-08!20;CL:0000738!4.05e-08!17;CL:0002087!4.05e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,9.14e-25,54;CL:0002320,7.53e-21,46;CL:0000134,7.53e-21,46;CL:0000988,2.04e-18,32;CL:0002032,2.04e-18,32;CL:0000037,2.04e-18,32;CL:0000837,2.04e-18,32;CL:0000034,6.04e-18,97;CL:0000066,9.50e-18,25;CL:0002031,1.93e-16,25;CL:0000723,3.12e-14,91;CL:0000048,3.12e-14,91;CL:0002076,3.45e-14,15;CL:0000223,1.48e-13,20;CL:0000738,1.70e-11,17;CL:0002087,1.70e-11,17;CL:0000049,4.79e-11,19;CL:0002321,1.44e-10,70;CL:0000838,1.99e-09,12;CL:0000763,6.78e-09,16;CL:0000791,8.03e-09,9;CL:0000789,8.03e-09,9;CL:0002420,8.03e-09,9;CL:0002419,8.03e-09,9;CL:0000790,8.03e-09,9;CL:0000084,9.17e-09,11;CL:0000827,9.17e-09,11;CL:0000542,1.90e-08,13;CL:0000051,1.90e-08,13;CL:0000839,2.56e-08,13;CL:0002563,3.50e-08,9;CL:0002251,3.50e-08,9;CL:0000624,5.94e-08,8;CL:0000075,2.05e-07,7;CL:0000473,6.70e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.62e-12!46;UBERON:0000344!3.30e-08!15;UBERON:0001242!6.31e-07!13;UBERON:0000060!6.31e-07!13;UBERON:0001262!6.31e-07!13;UBERON:0004786!6.31e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.53e-21,46;UBERON:0000344,2.41e-11,15;UBERON:0000485,6.14e-10,11;UBERON:0001242,2.90e-09,13;UBERON:0001262,2.90e-09,13;UBERON:0004786,2.90e-09,13;UBERON:0003350,3.50e-08,9;UBERON:0004808,3.50e-08,9;UBERON:0001277,3.50e-08,9;UBERON:0002371,3.87e-08,16;UBERON:0001474,3.41e-07,22;UBERON:0004765,3.41e-07,22;UBERON:0001434,3.41e-07,22 | |||
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| |||
|short_description=p@chr10:28749875..28749924,+ | |||
}} |
Revision as of 16:32, 12 September 2013
Short description: | p@chr10:28749875..28749924, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28749875..28749924, + |
Coexpression cluster: | MCL_coexpression_mm9:308 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.53e-21 | 46 |
mucosa | 2.41e-11 | 15 |
simple columnar epithelium | 6.14e-10 | 11 |
intestinal mucosa | 2.90e-09 | 13 |
wall of intestine | 2.90e-09 | 13 |
gastrointestinal system mucosa | 2.90e-09 | 13 |
epithelium of mucosa | 3.50e-08 | 9 |
gastrointestinal system epithelium | 3.50e-08 | 9 |
intestinal epithelium | 3.50e-08 | 9 |
bone marrow | 3.87e-08 | 16 |
bone element | 3.41e-07 | 22 |
skeletal element | 3.41e-07 | 22 |
skeletal system | 3.41e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.