FFCP PHASE1:Mm9::chr10:30522690..30522752,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=211329|HGNC=|UniProt=Q6DFV7,Q3TM55|association_with_transcript=160bp_to_ENSMUST00000068567,NM_172495,uc007etl.2,uc007eto.2_5end|description=CAGE_peak_2_at_Ncoa7_5end|id=chr10:30522690..30522752,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!5.84e-08!10;UBERON:0000411!5.84e-08!10;UBERON:0001950!5.84e-08!10;UBERON:0002346!3.93e-07!71;UBERON:0003075!3.93e-07!71;UBERON:0007284!3.93e-07!71;UBERON:0000479!5.21e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.73e-08,10;UBERON:0000411,5.73e-08,10;UBERON:0001950,5.73e-08,10;UBERON:0000479,4.51e-07,349;UBERON:0000073,8.33e-07,54|phase1_expression=2.5623815536767,0.697950815278722,1.36499771816861,0.60492842261366,5.00895729946347,0.33575854382378,0.700837921786577,3.35720640948098,0.985521055061667,0.234064526321993,0.513653904676515,0.319088635981346,2.73921167889929,2.44777126773193,13.9906099962578,29.7638643063044,32.1798463938947,3.47008381894061,4.79900517620086,5.09267582157636,9.26971862646661,3.07801948722744,3.39559725880616,1.59992422793407,1.37645568640302,1.14846392823004,0.430761996159075,0,0.570070258369122,1.00812051903972,0.886922042621219,3.81018404075779,1.84519436275371,0,0.288851619751275,0.498703936075477,0.204169356262369,1.67412652294763,3.1253413780952,0,0.588231488031014,0.683045484958446,0.971020706062307,7.67970589651021,5.06884656097573,2.75320128242522,1.56478268869608,0.872100625521786,0.439372365468944,0.58328969722285,0.699932108126813,0,3.18786951509699,3.62681071005672,6.38578218370682,2.82985379639542,4.58453503902011,2.06268836910977,3.43937983461316,3.70293685490423,1.90149421051854,1.35537812827653,0,1.3498495759221,0.988866362566974,2.8419204597844,1.19840044207362,1.92109152660777,3.62913643079672,3.10513658162888,2.52389953621658,8.2838785477103,4.63823935998388,3.30725157880376,2.30029130443767,1.83843757322004,5.50579404996943,19.5361627270337,20.8904885228491,4.08847491963601,4.39140689291566,7.8137005583514,12.0048689570594,7.87867654044352,16.8078072554491,12.6690291753677,13.6676813567139,7.82877672466262,1.81742863999642,5.97015324843606,3.76823835312181,4.30211938490693,0,0,0.649776417447669,0.448026887097336,4.35377702408431,8.35108580632483,6.23486411046885,5.3000936176551,2.81686839553361,15.3991772897181,25.4805239706646,14.2213340630666,0.216491041011214,0.253359865475099,0.505524445014783,5.02409070763864,13.7237078333001,15.4379824627418,5.20455980298408,7.91610243611567,7.37969591219387,10.0984169170257,11.5236932992991,9.29932775839599,15.8204779349999,13.8815382643115,8.84610551949874,4.52947179852746,10.6003928860989,14.0613823409214,1.86391761218122,31.034764483224,26.1808383516819,2.81002760729451,2.15667224110656,0.599902730993408,2.79554499560742,27.4116870110826,26.0775343606617,10.178002521142,33.7219181173016,27.6172693916757,17.8697718321222,23.5249831448249,4.17541391786297,7.46441823660558,4.0435641349388,5.05060454127538,2.21204753036596,2.75882525320168,4.68161537493908,4.67184935290717,4.55844544313897,4.35586648968489,2.90475346135159,7.76110112217047,0.862271971731369,2.83659120251729,2.11141348996739,2.19195732427575,2.78047249225598,3.1342694986995,3.49829631893504,4.57778813682534,0.702213187313235,2.83082697826187,1.98914449576915,3.72826390563903,4.22146907965973,2.34080679899319,2.84093682702252,2.95146347621106,2.46827380619805,1.62773761325285,2.41446061259657,2.45207218971056,3.12663714835613,3.2833492815819,2.51313309592153,3.07019973593198,3.73235195994786,4.02619256281115,35.7492912559016,13.377599609307,17.8426142811251,3.96675849995316,2.98603550749328,3.94802342162745,1.9330119198314,3.83198696784351,4.00280478920767,5.70676878337677,7.11793592316767,5.27036655116835,9.55073793441024,6.16765063327568,5.8489226135736,5.39291645192533,4.75503709724327,7.36822711041159,0.948339504765408,4.91268604221834,5.63538678365402,8.34970444165788,9.50367187121366,9.18779240563173,17.706230394792,15.941895981797,19.3108435244891,11.9695249004147,0.889357881261447,11.5123122944105,15.1350426237166,17.0895205412489,23.5317740810663,24.1177159752417,23.9348300674535,18.1248566594011,9.40384315295205,6.31491250332587,11.5014565221884,1.86070473834252,2.49630138491648,2.27320990152401,1.25578189465339,1.4473305640901,8.68339993783042,2.65287976478679,3.25929952884052,4.07388205860452,4.92849521405854,6.365237782789,6.42717830392237,6.43941037930736,8.35466263762812,7.52979944805835,9.8861956567642,9.01248230936559,9.15230403889247,12.0058718622655,19.6028669121054,5.98296252200581,2.95058563811422,1.10374698521893,26.972499117949,21.918585392742,3.11476396215683,2.7771801992481,7.2566890465739,7.41833614163613,10.5557464889071,3.10659437338318,6.90675889655422,7.64306633129848,3.23848561339915,7.3063964477828,3.55759000151871,22.1711708331047,16.3231097989509,3.38324646967785,4.56083486190013,7.75359577970917,1.32745138339963,2.6705869977048,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| ||
|EntrezGene=211329 | |||
|HGNC= | |||
|UniProt=Q6DFV7,Q3TM55 | |||
|association_with_transcript=160bp_to_ENSMUST00000068567,NM_172495,uc007etl.2,uc007eto.2_5end | |||
|description=CAGE_peak_2_at_Ncoa7_5end | |||
|id=chr10:30522690..30522752,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!5.84e-08!10;UBERON:0000411!5.84e-08!10;UBERON:0001950!5.84e-08!10;UBERON:0002346!3.93e-07!71;UBERON:0003075!3.93e-07!71;UBERON:0007284!3.93e-07!71;UBERON:0000479!5.21e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.73e-08,10;UBERON:0000411,5.73e-08,10;UBERON:0001950,5.73e-08,10;UBERON:0000479,4.51e-07,349;UBERON:0000073,8.33e-07,54 | |||
|phase1_expression=2.5623815536767,0.697950815278722,1.36499771816861,0.60492842261366,5.00895729946347,0.33575854382378,0.700837921786577,3.35720640948098,0.985521055061667,0.234064526321993,0.513653904676515,0.319088635981346,2.73921167889929,2.44777126773193,13.9906099962578,29.7638643063044,32.1798463938947,3.47008381894061,4.79900517620086,5.09267582157636,9.26971862646661,3.07801948722744,3.39559725880616,1.59992422793407,1.37645568640302,1.14846392823004,0.430761996159075,0,0.570070258369122,1.00812051903972,0.886922042621219,3.81018404075779,1.84519436275371,0,0.288851619751275,0.498703936075477,0.204169356262369,1.67412652294763,3.1253413780952,0,0.588231488031014,0.683045484958446,0.971020706062307,7.67970589651021,5.06884656097573,2.75320128242522,1.56478268869608,0.872100625521786,0.439372365468944,0.58328969722285,0.699932108126813,0,3.18786951509699,3.62681071005672,6.38578218370682,2.82985379639542,4.58453503902011,2.06268836910977,3.43937983461316,3.70293685490423,1.90149421051854,1.35537812827653,0,1.3498495759221,0.988866362566974,2.8419204597844,1.19840044207362,1.92109152660777,3.62913643079672,3.10513658162888,2.52389953621658,8.2838785477103,4.63823935998388,3.30725157880376,2.30029130443767,1.83843757322004,5.50579404996943,19.5361627270337,20.8904885228491,4.08847491963601,4.39140689291566,7.8137005583514,12.0048689570594,7.87867654044352,16.8078072554491,12.6690291753677,13.6676813567139,7.82877672466262,1.81742863999642,5.97015324843606,3.76823835312181,4.30211938490693,0,0,0.649776417447669,0.448026887097336,4.35377702408431,8.35108580632483,6.23486411046885,5.3000936176551,2.81686839553361,15.3991772897181,25.4805239706646,14.2213340630666,0.216491041011214,0.253359865475099,0.505524445014783,5.02409070763864,13.7237078333001,15.4379824627418,5.20455980298408,7.91610243611567,7.37969591219387,10.0984169170257,11.5236932992991,9.29932775839599,15.8204779349999,13.8815382643115,8.84610551949874,4.52947179852746,10.6003928860989,14.0613823409214,1.86391761218122,31.034764483224,26.1808383516819,2.81002760729451,2.15667224110656,0.599902730993408,2.79554499560742,27.4116870110826,26.0775343606617,10.178002521142,33.7219181173016,27.6172693916757,17.8697718321222,23.5249831448249,4.17541391786297,7.46441823660558,4.0435641349388,5.05060454127538,2.21204753036596,2.75882525320168,4.68161537493908,4.67184935290717,4.55844544313897,4.35586648968489,2.90475346135159,7.76110112217047,0.862271971731369,2.83659120251729,2.11141348996739,2.19195732427575,2.78047249225598,3.1342694986995,3.49829631893504,4.57778813682534,0.702213187313235,2.83082697826187,1.98914449576915,3.72826390563903,4.22146907965973,2.34080679899319,2.84093682702252,2.95146347621106,2.46827380619805,1.62773761325285,2.41446061259657,2.45207218971056,3.12663714835613,3.2833492815819,2.51313309592153,3.07019973593198,3.73235195994786,4.02619256281115,35.7492912559016,13.377599609307,17.8426142811251,3.96675849995316,2.98603550749328,3.94802342162745,1.9330119198314,3.83198696784351,4.00280478920767,5.70676878337677,7.11793592316767,5.27036655116835,9.55073793441024,6.16765063327568,5.8489226135736,5.39291645192533,4.75503709724327,7.36822711041159,0.948339504765408,4.91268604221834,5.63538678365402,8.34970444165788,9.50367187121366,9.18779240563173,17.706230394792,15.941895981797,19.3108435244891,11.9695249004147,0.889357881261447,11.5123122944105,15.1350426237166,17.0895205412489,23.5317740810663,24.1177159752417,23.9348300674535,18.1248566594011,9.40384315295205,6.31491250332587,11.5014565221884,1.86070473834252,2.49630138491648,2.27320990152401,1.25578189465339,1.4473305640901,8.68339993783042,2.65287976478679,3.25929952884052,4.07388205860452,4.92849521405854,6.365237782789,6.42717830392237,6.43941037930736,8.35466263762812,7.52979944805835,9.8861956567642,9.01248230936559,9.15230403889247,12.0058718622655,19.6028669121054,5.98296252200581,2.95058563811422,1.10374698521893,26.972499117949,21.918585392742,3.11476396215683,2.7771801992481,7.2566890465739,7.41833614163613,10.5557464889071,3.10659437338318,6.90675889655422,7.64306633129848,3.23848561339915,7.3063964477828,3.55759000151871,22.1711708331047,16.3231097989509,3.38324646967785,4.56083486190013,7.75359577970917,1.32745138339963,2.6705869977048,1.51161778482376,3.20628635585027,1.47650946440386,4.61152721915891,6.71913562237375,6.5436071305951,5.34746067577082,4.74055136903724,2.10837217149998,2.06271086496374,13.9580238359053,2.34079422240703,0.905510786479282,2.57204442037911,5.14286677562593,5.17269571046005,6.91105886528908,1.8267896946876,4.92810586933792,4.2366414172764,1.7642271844397,9.39851641766436,4.19807509409354,4.644095219468,2.50681922406587,3.77524069413641,6.41257840585672,23.1781627513137,18.9666677685616,5.15967169908056,10.0005044779644,24.4878994106098,28.7057878214153,29.7411625168479,1.5298058699447,1.6794174278839,2.3493995546752,6.68269432610579,3.32152793260192,4.87966721104437,4.64422965533745,3.55450103224597,7.20596460362386,6.7432173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| |||
|short_description=p2@Ncoa7 | |||
}} | |||
Revision as of 16:34, 12 September 2013
| Short description: | p2@Ncoa7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Ncoa7_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 160bp_to_ENSMUST00000068567, NM_172495, uc007etl.2, uc007eto.2_5end |
| EntrezGene: | Ncoa7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 5.73e-08 | 10 |
| visual cortex | 5.73e-08 | 10 |
| neocortex | 5.73e-08 | 10 |
| tissue | 4.51e-07 | 349 |
| regional part of nervous system | 8.33e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
