FFCP PHASE1:Mm9::chr10:32802946..32802960,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76757|HGNC=|MCL_coexpression_id=19|UniProt=E9Q9U7,E9PWI1,E9Q9K5,Q9CV36,Q8VIN9,Q8VIN8,Q8VIN7|association_with_transcript=-328bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end|description=CAGE_peak_4_at_Trdn_5end|id=chr10:32802946..32802960,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.08e-23!18;UBERON:0000948!1.08e-23!18;UBERON:0005498!1.08e-23!18;UBERON:0004140!1.08e-23!18;UBERON:0009881!1.08e-23!18;UBERON:0004141!1.08e-23!18;UBERON:0003084!1.08e-23!18;UBERON:0007005!1.08e-23!18;UBERON:0004139!1.08e-23!18;UBERON:0004291!1.08e-23!18;UBERON:0004535!1.81e-17!23;UBERON:0001009!1.81e-17!23;UBERON:0004872!2.97e-12!33;UBERON:0003103!2.29e-09!43;UBERON:0003914!3.40e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.38e-63,18;UBERON:0000948,1.38e-63,18;UBERON:0005498,1.38e-63,18;UBERON:0004140,1.38e-63,18;UBERON:0009881,1.38e-63,18;UBERON:0004141,1.38e-63,18;UBERON:0003084,1.38e-63,18;UBERON:0007005,1.38e-63,18;UBERON:0004139,1.38e-63,18;UBERON:0004291,1.38e-63,18;UBERON:0004535,2.15e-49,23;UBERON:0001009,2.15e-49,23;UBERON:0004872,6.88e-34,33;UBERON:0003103,1.41e-25,43;UBERON:0003914,3.07e-23,47;UBERON:0003081,2.23e-15,87;UBERON:0010314,6.94e-11,92;UBERON:0000926,1.48e-10,120;UBERON:0004120,1.48e-10,120;UBERON:0006603,1.48e-10,120;UBERON:0001048,3.21e-09,134;UBERON:0000025,2.27e-08,114;UBERON:0004111,1.12e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44988040774851,1.40715635988658,1.80062061461015,3.55117103377815,1.77087808572663,2.93107514486019,2.79040733700489,2.14618721119695,3.97002164048376,2.79751744852917,1.97000956894914,3.56702762001765,2.77779976108131,1.75640092232841,2.41571553768669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.714130922658041,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.256100609619477,0.34461281373368,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.338458431566706,0.548783918618318,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p4@Trdn}} | ||
|EntrezGene=76757 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=E9Q9U7,E9PWI1,E9Q9K5,Q9CV36,Q8VIN9,Q8VIN8,Q8VIN7 | |||
|association_with_transcript=-328bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end | |||
|description=CAGE_peak_4_at_Trdn_5end | |||
|id=chr10:32802946..32802960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.08e-23!18;UBERON:0000948!1.08e-23!18;UBERON:0005498!1.08e-23!18;UBERON:0004140!1.08e-23!18;UBERON:0009881!1.08e-23!18;UBERON:0004141!1.08e-23!18;UBERON:0003084!1.08e-23!18;UBERON:0007005!1.08e-23!18;UBERON:0004139!1.08e-23!18;UBERON:0004291!1.08e-23!18;UBERON:0004535!1.81e-17!23;UBERON:0001009!1.81e-17!23;UBERON:0004872!2.97e-12!33;UBERON:0003103!2.29e-09!43;UBERON:0003914!3.40e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.38e-63,18;UBERON:0000948,1.38e-63,18;UBERON:0005498,1.38e-63,18;UBERON:0004140,1.38e-63,18;UBERON:0009881,1.38e-63,18;UBERON:0004141,1.38e-63,18;UBERON:0003084,1.38e-63,18;UBERON:0007005,1.38e-63,18;UBERON:0004139,1.38e-63,18;UBERON:0004291,1.38e-63,18;UBERON:0004535,2.15e-49,23;UBERON:0001009,2.15e-49,23;UBERON:0004872,6.88e-34,33;UBERON:0003103,1.41e-25,43;UBERON:0003914,3.07e-23,47;UBERON:0003081,2.23e-15,87;UBERON:0010314,6.94e-11,92;UBERON:0000926,1.48e-10,120;UBERON:0004120,1.48e-10,120;UBERON:0006603,1.48e-10,120;UBERON:0001048,3.21e-09,134;UBERON:0000025,2.27e-08,114;UBERON:0004111,1.12e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,1.45590164952668,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44988040774851,1.40715635988658,1.80062061461015,3.55117103377815,1.77087808572663,2.93107514486019,2.79040733700489,2.14618721119695,3.97002164048376,2.79751744852917,1.97000956894914,3.56702762001765,2.77779976108131,1.75640092232841,2.41571553768669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.714130922658041,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0.256100609619477,0.34461281373368,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.338458431566706,0.548783918618318,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Trdn | |||
}} |
Revision as of 16:35, 12 September 2013
Short description: | p4@Trdn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trdn_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -328bp_to_ENSMUST00000050626, ENSMUST00000075979, ENSMUST00000095762, NM_029726, uc007etz.2, uc007eua.2, uc007eub.2, uc011xcl.1_5end |
EntrezGene: | Trdn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.38e-63 | 18 |
heart | 1.38e-63 | 18 |
primitive heart tube | 1.38e-63 | 18 |
primary heart field | 1.38e-63 | 18 |
anterior lateral plate mesoderm | 1.38e-63 | 18 |
heart tube | 1.38e-63 | 18 |
heart primordium | 1.38e-63 | 18 |
cardiac mesoderm | 1.38e-63 | 18 |
cardiogenic plate | 1.38e-63 | 18 |
heart rudiment | 1.38e-63 | 18 |
cardiovascular system | 2.15e-49 | 23 |
circulatory system | 2.15e-49 | 23 |
splanchnic layer of lateral plate mesoderm | 6.88e-34 | 33 |
compound organ | 1.41e-25 | 43 |
epithelial tube | 3.07e-23 | 47 |
lateral plate mesoderm | 2.23e-15 | 87 |
structure with developmental contribution from neural crest | 6.94e-11 | 92 |
mesoderm | 1.48e-10 | 120 |
mesoderm-derived structure | 1.48e-10 | 120 |
presumptive mesoderm | 1.48e-10 | 120 |
primordium | 3.21e-09 | 134 |
tube | 2.27e-08 | 114 |
anatomical conduit | 1.12e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.