FFCP PHASE1:Hg19::chr2:239756739..239756755,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=117581 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20670 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=13bp_to_uc010zny.1_5end | |||
|coexpression_cluster_id=C4207 | |||
|description=CAGE_peak_2_at_TWIST2_5end | |||
|id=chr2:239756739..239756755,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.05e-42!180;CL:0000057!5.15e-31!75;CL:0000680!6.40e-19!57;CL:0000056!6.40e-19!57;CL:0000355!6.40e-19!57;CL:0000187!2.96e-18!54;CL:0000183!3.85e-17!59;CL:0000393!5.35e-16!60;CL:0000211!5.35e-16!60;CL:0000192!1.16e-15!42;CL:0000514!1.16e-15!42;CL:0002620!2.97e-14!23;CL:0000222!3.40e-12!119;CL:0000359!1.30e-11!32;CL:0000136!1.84e-10!15;CL:0000048!3.07e-09!430;CL:0002371!5.00e-09!591;CL:0000723!5.40e-09!436;CL:0000144!1.56e-08!625;CL:0000034!1.40e-07!444;CL:0002334!2.50e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.84e-16;23!CL:0000057;3.07e-14;73!CL:0000192;4.75e-13;43!CL:0000359;3.22e-12;32!CL:0000187;8.85e-12;55!CL:0000136;3.29e-10;13!CL:0000393;9.44e-10;61!CL:0000211;9.44e-10;61!CL:0002320;8.66e-09;188!CL:0002334;4.98e-08;12!CL:0000134;6.26e-07;55!CL:0002494;8.47e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.83e-35,76;CL:0000680,1.40e-21,58;CL:0000056,1.40e-21,58;CL:0000355,1.40e-21,58;CL:0000187,7.90e-21,55;CL:0000393,2.61e-18,61;CL:0000211,2.61e-18,61;CL:0000192,6.59e-18,43;CL:0000514,6.59e-18,43;CL:0002620,7.78e-16,23;CL:0000048,1.09e-15,427;CL:0000723,3.36e-15,433;CL:0000034,1.15e-13,441;CL:0000359,7.23e-13,32;CL:0000222,4.80e-12,121;CL:0000136,1.43e-11,15;CL:0002334,4.75e-08,12;CL:0002321,5.61e-07,250;CL:0002494,6.98e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.75e-13;43!CL:0000355;1.01e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.31e-25!83;UBERON:0002329!3.31e-25!83;UBERON:0003077!3.31e-25!83;UBERON:0003059!3.31e-25!83;UBERON:0007282!3.31e-25!83;UBERON:0009618!3.31e-25!83;UBERON:0007285!3.31e-25!83;UBERON:0004290!8.19e-24!70;UBERON:0000486!3.12e-21!82;UBERON:0001134!5.58e-19!61;UBERON:0002036!5.58e-19!61;UBERON:0003082!5.58e-19!61;UBERON:0002385!1.27e-18!63;UBERON:0001015!1.27e-18!63;UBERON:0000383!1.27e-18!63;UBERON:0003102!5.43e-17!95;UBERON:0002199!2.91e-15!45;UBERON:0002416!2.91e-15!45;UBERON:0005256!1.23e-12!143;UBERON:0004872!1.61e-12!84;UBERON:0002097!1.97e-12!40;UBERON:0001637!2.89e-12!42;UBERON:0003509!2.89e-12!42;UBERON:0004572!2.89e-12!42;UBERON:0000475!2.25e-11!365;UBERON:0001981!1.03e-10!60;UBERON:0007500!1.03e-10!60;UBERON:0004537!1.03e-10!60;UBERON:0006965!1.03e-10!60;UBERON:0002100!1.07e-10!216;UBERON:0004573!2.24e-10!33;UBERON:0004571!2.24e-10!33;UBERON:0002049!2.78e-10!79;UBERON:0007798!2.78e-10!79;UBERON:0001013!9.15e-10!14;UBERON:0000490!2.26e-09!138;UBERON:0000468!2.94e-09!659;UBERON:0003104!1.19e-08!238;UBERON:0009142!1.19e-08!238;UBERON:0000467!1.36e-08!625;UBERON:0000480!2.06e-08!626;UBERON:0004535!2.35e-08!110;UBERON:0000055!2.60e-08!69;UBERON:0001009!4.65e-08!113;UBERON:0000926!5.65e-08!448;UBERON:0004120!5.65e-08!448;UBERON:0006603!5.65e-08!448;UBERON:0000481!2.26e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.23e-11;46!UBERON:0002416;1.23e-11;46!UBERON:0001013;7.96e-11;14!UBERON:0002097;8.46e-11;41!UBERON:0003102;1.97e-10;50!UBERON:0004573;3.68e-10;33!UBERON:0004571;3.68e-10;33!UBERON:0002384;5.37e-10;198!UBERON:0001637;3.34e-09;42!UBERON:0003509;3.34e-09;42!UBERON:0004572;3.34e-09;42!UBERON:0002385;4.34e-08;31!UBERON:0001015;4.34e-08;31!UBERON:0000383;4.34e-08;31!UBERON:0002067;5.61e-07;9 | |||
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| |||
|short_description=p2@TWIST2 | |||
}} |
Revision as of 17:42, 12 September 2013
Short description: | p2@TWIST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TWIST2_5end |
Coexpression cluster: | C4207_Mesenchymal_Fibroblast_Adipocyte_Pancreatic_Trabecular_tenocyte_Hair |
Association with transcript: | 13bp_to_uc010zny.1_5end |
EntrezGene: | TWIST2 |
HGNC: | 20670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.83e-35 | 76 |
muscle precursor cell | 1.40e-21 | 58 |
myoblast | 1.40e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.40e-21 | 58 |
muscle cell | 7.90e-21 | 55 |
electrically responsive cell | 2.61e-18 | 61 |
electrically active cell | 2.61e-18 | 61 |
smooth muscle cell | 6.59e-18 | 43 |
smooth muscle myoblast | 6.59e-18 | 43 |
skin fibroblast | 7.78e-16 | 23 |
multi fate stem cell | 1.09e-15 | 427 |
somatic stem cell | 3.36e-15 | 433 |
stem cell | 1.15e-13 | 441 |
vascular associated smooth muscle cell | 7.23e-13 | 32 |
mesodermal cell | 4.80e-12 | 121 |
fat cell | 1.43e-11 | 15 |
preadipocyte | 4.75e-08 | 12 |
embryonic cell | 5.61e-07 | 250 |
cardiocyte | 6.98e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.