FFCP PHASE1:Mm9::chr11:100334039..100334073,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=217194|HGNC=|MCL_coexpression_id=2616|UniProt=Q8CE33|association_with_transcript=0bp_to_ENSMUST00000056665_5end|description=CAGE_peak_2_at_Klhl11_5end|id=chr11:100334039..100334073,-|ontology_enrichment_celltype=CL:0000117!1.68e-07!23;CL:0000337!1.68e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-07,23;CL:0000337,1.68e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.55e-20!94;UBERON:0000033!1.55e-19!63;UBERON:0007811!1.69e-19!86;UBERON:0000955!1.71e-16!50;UBERON:0006238!1.71e-16!50;UBERON:0002346!2.40e-16!71;UBERON:0003075!2.40e-16!71;UBERON:0007284!2.40e-16!71;UBERON:0002616!7.68e-16!49;UBERON:0003056!1.02e-15!49;UBERON:0001049!2.45e-15!52;UBERON:0005068!2.45e-15!52;UBERON:0006241!2.45e-15!52;UBERON:0007135!2.45e-15!52;UBERON:0004121!1.80e-14!102;UBERON:0000924!1.80e-14!102;UBERON:0006601!1.80e-14!102;UBERON:0000475!3.45e-14!200;UBERON:0003080!1.24e-13!40;UBERON:0002780!5.04e-13!39;UBERON:0001890!5.04e-13!39;UBERON:0006240!5.04e-13!39;UBERON:0001017!8.71e-13!73;UBERON:0005743!8.71e-13!73;UBERON:0000073!3.82e-12!75;UBERON:0001016!3.82e-12!75;UBERON:0002020!1.04e-11!34;UBERON:0002791!5.38e-11!29;UBERON:0003528!5.38e-11!29;UBERON:0001893!5.38e-11!29;UBERON:0000956!1.52e-07!21;UBERON:0001869!1.52e-07!21;UBERON:0000203!1.52e-07!21;UBERON:0002021!6.06e-07!10;UBERON:0000411!6.06e-07!10;UBERON:0001950!6.06e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.33e-17,73;UBERON:0002346,6.05e-17,64;UBERON:0003075,6.05e-17,64;UBERON:0007284,6.05e-17,64;UBERON:0000073,1.01e-16,54;UBERON:0003056,1.02e-15,49;UBERON:0001049,2.45e-15,52;UBERON:0005068,2.45e-15,52;UBERON:0006241,2.45e-15,52;UBERON:0007135,2.45e-15,52;UBERON:0004121,1.43e-14,95;UBERON:0000924,1.43e-14,95;UBERON:0006601,1.43e-14,95;UBERON:0000955,1.59e-14,47;UBERON:0006238,1.59e-14,47;UBERON:0002616,6.78e-14,46;UBERON:0003080,1.24e-13,40;UBERON:0002780,5.04e-13,39;UBERON:0001890,5.04e-13,39;UBERON:0006240,5.04e-13,39;UBERON:0001017,8.71e-13,73;UBERON:0001016,3.82e-12,75;UBERON:0002020,1.04e-11,34;UBERON:0003528,5.38e-11,29;UBERON:0002791,5.38e-11,29;UBERON:0001893,5.38e-11,29;UBERON:0010314,5.98e-11,92;UBERON:0000956,1.52e-07,21;UBERON:0001869,1.52e-07,21;UBERON:0000203,1.52e-07,21;UBERON:0002021,6.06e-07,10;UBERON:0000411,6.06e-07,10;UBERON:0001950,6.06e-07,10|phase1_expression=12.9720566154883,1.39590163055744,1.36499771816861,3.0246421130683,2.00358291978539,4.02910252588535,2.10251376535973,5.81054955487093,15.4867594366833,13.5757425266756,6.8487187290202,5.66382328866889,7.70403284690426,6.7313709862628,3.99731714178795,3.84703008040669,3.49780939064073,5.99378114180652,6.03303507865251,5.94145512517242,11.5658874605455,4.76596565764249,4.96279599363977,1.59992422793407,1.60586496747019,2.8711598205751,0.86152399231815,1.939241094173,1.52018735565099,3.78045194639896,2.66076612786366,3.17515336729816,2.46025915033828,0,2.3108129580102,3.98963148860382,2.85837098767317,5.4409111995798,3.1253413780952,6.28228492768558,5.29408339227913,3.41522742479223,1.94204141212461,6.29484089877886,7.29913904780505,5.87349606917381,2.34717403304412,1.09012578190223,1.97717564461025,3.4997381833371,1.95980990275508,1.43752564364972,13.4226084846189,10.1550699881588,12.0993767691287,5.14518872071894,2.86533439938757,5.67239301505187,6.47412674750713,9.52183762689659,5.07065122804943,1.35537812827653,1.77858959222228,3.1496490104849,0,0.7104801149461,1.19840044207362,1.92109152660777,9.7468235569969,6.21027316325777,9.46462326081219,5.42736870367227,5.96345060569357,9.55428233876641,8.05101956553185,8.27296907949019,26.4278114398533,25.6651549551227,21.5049146558741,9.36392642884376,7.31901148819277,9.89735404057844,18.1468949350898,19.6966913511088,21.697351184307,8.54422897873636,14.8066548031067,9.69277118291563,4.01348824665875,4.83657984683427,8.11620568364698,1.72084775396277,2.03991400112325,1.61910957491345,3.89865850468601,3.13618820968135,4.63466586434781,4.60161870960756,3.89679006904303,2.47337702157238,8.45060518660083,6.41632387071589,12.7402619853323,14.2213340630666,1.94841936910093,2.28023878927589,3.0331466700887,4.33898742932428,5.95557132388495,12.0238132642508,6.07198643681475,2.13125834818499,6.45723392316964,3.61734337326294,6.23220147819235,9.17366116706631,3.70792451601561,4.04878199375753,2.65383165584962,4.36770494858005,4.41683036920787,5.33362778448744,3.72783522436244,18.4451902117275,21.5730108017859,3.0654846625031,4.91242010474273,2.39961092397363,3.81210681219194,21.4200614348896,11.4375150704657,15.7067940141081,22.4233373048037,23.0143911597297,21.6099566341943,23.8494656709604,10.4894544765826,6.22034853050465,9.09801930361229,8.20723237957248,4.29397461776922,9.42598628177239,9.54329287968351,7.08312643827861,10.6136938676071,8.19927809823039,11.2442069471675,14.7460921321239,6.03590380211958,8.13156144721623,6.68614271823006,8.98702502953057,5.56094498451196,7.66154766348766,6.58502836505419,4.57778813682534,1.40442637462647,2.573479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| ||
|EntrezGene=217194 | |||
|HGNC= | |||
|MCL_coexpression_id=2616 | |||
|UniProt=Q8CE33 | |||
|association_with_transcript=0bp_to_ENSMUST00000056665_5end | |||
|description=CAGE_peak_2_at_Klhl11_5end | |||
|id=chr11:100334039..100334073,- | |||
|ontology_enrichment_celltype=CL:0000117!1.68e-07!23;CL:0000337!1.68e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.68e-07,23;CL:0000337,1.68e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.55e-20!94;UBERON:0000033!1.55e-19!63;UBERON:0007811!1.69e-19!86;UBERON:0000955!1.71e-16!50;UBERON:0006238!1.71e-16!50;UBERON:0002346!2.40e-16!71;UBERON:0003075!2.40e-16!71;UBERON:0007284!2.40e-16!71;UBERON:0002616!7.68e-16!49;UBERON:0003056!1.02e-15!49;UBERON:0001049!2.45e-15!52;UBERON:0005068!2.45e-15!52;UBERON:0006241!2.45e-15!52;UBERON:0007135!2.45e-15!52;UBERON:0004121!1.80e-14!102;UBERON:0000924!1.80e-14!102;UBERON:0006601!1.80e-14!102;UBERON:0000475!3.45e-14!200;UBERON:0003080!1.24e-13!40;UBERON:0002780!5.04e-13!39;UBERON:0001890!5.04e-13!39;UBERON:0006240!5.04e-13!39;UBERON:0001017!8.71e-13!73;UBERON:0005743!8.71e-13!73;UBERON:0000073!3.82e-12!75;UBERON:0001016!3.82e-12!75;UBERON:0002020!1.04e-11!34;UBERON:0002791!5.38e-11!29;UBERON:0003528!5.38e-11!29;UBERON:0001893!5.38e-11!29;UBERON:0000956!1.52e-07!21;UBERON:0001869!1.52e-07!21;UBERON:0000203!1.52e-07!21;UBERON:0002021!6.06e-07!10;UBERON:0000411!6.06e-07!10;UBERON:0001950!6.06e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.33e-17,73;UBERON:0002346,6.05e-17,64;UBERON:0003075,6.05e-17,64;UBERON:0007284,6.05e-17,64;UBERON:0000073,1.01e-16,54;UBERON:0003056,1.02e-15,49;UBERON:0001049,2.45e-15,52;UBERON:0005068,2.45e-15,52;UBERON:0006241,2.45e-15,52;UBERON:0007135,2.45e-15,52;UBERON:0004121,1.43e-14,95;UBERON:0000924,1.43e-14,95;UBERON:0006601,1.43e-14,95;UBERON:0000955,1.59e-14,47;UBERON:0006238,1.59e-14,47;UBERON:0002616,6.78e-14,46;UBERON:0003080,1.24e-13,40;UBERON:0002780,5.04e-13,39;UBERON:0001890,5.04e-13,39;UBERON:0006240,5.04e-13,39;UBERON:0001017,8.71e-13,73;UBERON:0001016,3.82e-12,75;UBERON:0002020,1.04e-11,34;UBERON:0003528,5.38e-11,29;UBERON:0002791,5.38e-11,29;UBERON:0001893,5.38e-11,29;UBERON:0010314,5.98e-11,92;UBERON:0000956,1.52e-07,21;UBERON:0001869,1.52e-07,21;UBERON:0000203,1.52e-07,21;UBERON:0002021,6.06e-07,10;UBERON:0000411,6.06e-07,10;UBERON:0001950,6.06e-07,10 | |||
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| |||
|short_description=p2@Klhl11 | |||
}} |
Revision as of 18:10, 12 September 2013
Short description: | p2@Klhl11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Klhl11_5end |
Coexpression cluster: | MCL_coexpression_mm9:2616 |
Association with transcript: | 0bp_to_ENSMUST00000056665_5end |
EntrezGene: | Klhl11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.68e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.33e-17 | 73 |
neurectoderm | 6.05e-17 | 64 |
neural plate | 6.05e-17 | 64 |
presumptive neural plate | 6.05e-17 | 64 |
regional part of nervous system | 1.01e-16 | 54 |
pre-chordal neural plate | 1.02e-15 | 49 |
neural tube | 2.45e-15 | 52 |
neural rod | 2.45e-15 | 52 |
future spinal cord | 2.45e-15 | 52 |
neural keel | 2.45e-15 | 52 |
ectoderm-derived structure | 1.43e-14 | 95 |
ectoderm | 1.43e-14 | 95 |
presumptive ectoderm | 1.43e-14 | 95 |
brain | 1.59e-14 | 47 |
future brain | 1.59e-14 | 47 |
regional part of brain | 6.78e-14 | 46 |
anterior neural tube | 1.24e-13 | 40 |
regional part of forebrain | 5.04e-13 | 39 |
forebrain | 5.04e-13 | 39 |
future forebrain | 5.04e-13 | 39 |
central nervous system | 8.71e-13 | 73 |
nervous system | 3.82e-12 | 75 |
gray matter | 1.04e-11 | 34 |
brain grey matter | 5.38e-11 | 29 |
regional part of telencephalon | 5.38e-11 | 29 |
telencephalon | 5.38e-11 | 29 |
structure with developmental contribution from neural crest | 5.98e-11 | 92 |
cerebral cortex | 1.52e-07 | 21 |
cerebral hemisphere | 1.52e-07 | 21 |
pallium | 1.52e-07 | 21 |
occipital lobe | 6.06e-07 | 10 |
visual cortex | 6.06e-07 | 10 |
neocortex | 6.06e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.