FFCP PHASE1:Mm9::chr11:103224942..103224953,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=544817|HGNC=|MCL_coexpression_id=58|UniProt=A2AB59,A2AKN5|association_with_transcript=52bp_to_ENSMUST00000116102,NM_001205236,NM_183288_5end|description=CAGE_peak_12_at_Arhgap27_5end|id=chr11:103224942..103224953,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,4.47e-25,3;CL:0000239,5.69e-22,6;CL:0000677,5.69e-22,6;CL:0000584,5.69e-22,6;CL:0000075,6.79e-19,7;CL:0000066,1.27e-15,25;CL:0002563,8.80e-15,9;CL:0002251,8.80e-15,9;CL:0000473,3.93e-11,7;CL:0002076,5.42e-09,15;CL:0000223,8.38e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!1.67e-07!41;UBERON:0001004!3.47e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-25,15;UBERON:0001962,9.93e-17,2;UBERON:0001961,9.93e-17,2;UBERON:0001744,9.93e-17,2;UBERON:0004923,5.52e-16,24;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0003350,8.80e-15,9;UBERON:0004808,8.80e-15,9;UBERON:0001277,8.80e-15,9;UBERON:0000485,3.71e-12,11;UBERON:0002465,1.75e-11,3;UBERON:0003199,3.65e-09,1;UBERON:0000996,6.33e-09,1|phase1_expression=0,8.37540978334467,10.9199817453489,0,0,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0,0,0,2.55987876469451,2.06468352960453,4.59385571292016,3.4460959692726,3.66301095566011,0,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.670025029767263,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0.680191150845634,0,0.179427713218951,0,0,0,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0.191288332068843,0,0|short_description=p12@Arhgap27}} | ||
|EntrezGene=544817 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=A2AB59,A2AKN5 | |||
|association_with_transcript=52bp_to_ENSMUST00000116102,NM_001205236,NM_183288_5end | |||
|description=CAGE_peak_12_at_Arhgap27_5end | |||
|id=chr11:103224942..103224953,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.47e-25,3;CL:0000239,5.69e-22,6;CL:0000677,5.69e-22,6;CL:0000584,5.69e-22,6;CL:0000075,6.79e-19,7;CL:0000066,1.27e-15,25;CL:0002563,8.80e-15,9;CL:0002251,8.80e-15,9;CL:0000473,3.93e-11,7;CL:0002076,5.42e-09,15;CL:0000223,8.38e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.67e-07!41;UBERON:0001004!3.47e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-25,15;UBERON:0001962,9.93e-17,2;UBERON:0001961,9.93e-17,2;UBERON:0001744,9.93e-17,2;UBERON:0004923,5.52e-16,24;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0003350,8.80e-15,9;UBERON:0004808,8.80e-15,9;UBERON:0001277,8.80e-15,9;UBERON:0000485,3.71e-12,11;UBERON:0002465,1.75e-11,3;UBERON:0003199,3.65e-09,1;UBERON:0000996,6.33e-09,1 | |||
|phase1_expression=0,8.37540978334467,10.9199817453489,0,0,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0,0,0,2.55987876469451,2.06468352960453,4.59385571292016,3.4460959692726,3.66301095566011,0,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0.670025029767263,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,0.680191150845634,0,0.179427713218951,0,0,0,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0.191288332068843,0,0 | |||
|short_description=p12@Arhgap27 | |||
}} |
Revision as of 18:25, 12 September 2013
Short description: | p12@Arhgap27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Arhgap27_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 52bp_to_ENSMUST00000116102, NM_001205236, NM_183288_5end |
EntrezGene: | Arhgap27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.47e-25 | 3 |
brush border epithelial cell | 5.69e-22 | 6 |
gut absorptive cell | 5.69e-22 | 6 |
enterocyte | 5.69e-22 | 6 |
columnar/cuboidal epithelial cell | 6.79e-19 | 7 |
epithelial cell | 1.27e-15 | 25 |
intestinal epithelial cell | 8.80e-15 | 9 |
epithelial cell of alimentary canal | 8.80e-15 | 9 |
defensive cell | 3.93e-11 | 7 |
endo-epithelial cell | 5.42e-09 | 15 |
endodermal cell | 8.38e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.02e-25 | 15 |
gut-associated lymphoid tissue | 9.93e-17 | 2 |
mucosa-associated lymphoid tissue | 9.93e-17 | 2 |
lymphoid tissue | 9.93e-17 | 2 |
organ component layer | 5.52e-16 | 24 |
intestinal mucosa | 1.57e-15 | 13 |
wall of intestine | 1.57e-15 | 13 |
gastrointestinal system mucosa | 1.57e-15 | 13 |
epithelium of mucosa | 8.80e-15 | 9 |
gastrointestinal system epithelium | 8.80e-15 | 9 |
intestinal epithelium | 8.80e-15 | 9 |
simple columnar epithelium | 3.71e-12 | 11 |
lymphoid system | 1.75e-11 | 3 |
egg chamber | 3.65e-09 | 1 |
vagina | 6.33e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.