Personal tools

FFCP PHASE1:Mm9::chr11:117734778..117734795,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=71776|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=0bp_to_ENSMUST00000153989_5end|description=CAGE_peak_2_at_Tha1_5end|id=chr11:117734778..117734795,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.53e-11!43;UBERON:0000344!3.29e-08!15;UBERON:0001242!1.51e-07!13;UBERON:0000060!1.51e-07!13;UBERON:0001262!1.51e-07!13;UBERON:0004786!1.51e-07!13;UBERON:0005409!3.85e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.74e-12,31;UBERON:0000344,2.80e-08,15;UBERON:0001242,1.30e-07,13;UBERON:0001262,1.30e-07,13;UBERON:0004786,1.30e-07,13|phase1_expression=0.480446541314382,22.6834014965585,18.654968814971,28.1291716515352,32.0573267165662,2.85394762250213,5.37309073369709,2.32421982194837,1.40788722151667,2.10658073689794,0.34243593645101,0.717949430958028,4.10881751834894,2.79745287740792,0.666219523631325,1.01237633694913,0,2.05050407482854,3.83920414096069,2.12194825899015,2.72138528483423,1.29078236561151,0.783599367416806,2.71987118748791,5.27641346454491,12.0588712464154,6.46142994238612,6.89507944594845,9.31114755336232,6.80481350351813,5.76499327703792,0,0,0,3.17736781726402,1.99481574430191,3.67504841272264,0,0,0,0,0,0,0.881277725829041,1.21652317463417,1.28482726513177,0.782391344348039,3.48840250208714,0.439372365468944,1.55543919259427,0.979904951377538,1.43752564364972,1.67782606057736,0.725362142011344,1.00828139742739,0.257259436035947,2.86533439938757,2.06268836910977,1.01158230429799,1.5869729378161,3.80298842103708,0.677689064138264,1.77858959222228,0.899899717281399,0,2.8419204597844,0.898800331555214,3.84218305321555,0.622137673850866,0.810035629990144,0.210324961351382,1.14260393761521,0.883474163806454,0.857435594504678,1.24599112323707,3.67687514644008,6.60695285996332,1.53224805702225,2.61131106535614,1.45074916503213,2.10421580285542,0.52091337055676,3.35019598801657,1.68828783009504,3.81995619442025,2.06240009831567,1.70846016958924,0.931997229126503,1.13589289999776,0.68014404096107,3.47837386442013,4.30211938490693,1.3599426674155,2.15881276655127,4.54843492213368,1.79210754838934,2.10666630197628,2.04516387093669,1.29893002301434,1.41335829804136,2.39433813620357,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,4.33898742932428,3.36619248741323,3.41416919849097,2.60227990149204,3.65358573974569,2.30615497256059,2.11011696773672,1.76383060703557,3.76999773989026,2.47194967734374,3.32578520915797,0.884610551949874,1.13236794963186,1.32504911076236,0.969750506270444,3.72783522436244,3.80615036115011,2.51336048176146,9.45191104271788,0.958520996047362,1.19980546198682,0.635351135365324,3.59497534571574,4.57500602818627,1.13088916901578,3.99795936442236,4.60287823194595,2.0778804455956,2.43361894601636,1.73126918545538,1.36847667671102,1.26361379216837,1.47309299120532,1.69156575851515,1.14951052216736,1.26043490863744,1.80845781402858,2.04109497453984,2.17793324484245,1.87403449119458,1.81092359517311,0.215567992932842,0,1.05570674498369,0.657587197282725,1.11218899690239,2.089512999133,1.02891068203972,1.19420560091096,0.702213187313235,0.772043721344145,0,1.44988040774851,1.40715635988658,1.08037236876609,0.946978942340841,0.983821158737019,2.00547246753592,2.09280550275367,2.95100741539581,1.40118410840603,2.46839774870221,1.80584210487005,2.26992666728396,2.19299981137998,2.41505126820156,2.41571553768669,2.94405927989778,1.54356918568927,5.61711931072457,14.2803305998314,2.13288250535234,1.16118335930219,1.80414445850931,2.62188582010345,3.55804870151792,5.51654315726422,7.11793592316767,3.78807595865225,3.51869292320377,2.58643413653496,3.50935356814416,7.19055526923377,3.8904848977445,2.58883655230677,1.51734320762465,1.37098215131675,0,1.4255592949172,2.32742984601151,1.54298803758701,1.89709611372772,2.80459281161244,1.56998727841375,3.08492909804501,3.26097889795864,0.667380422864376,0.589676985339609,0.224862112384854,1.01430060694251,0.964708639009667,2.5462585178142,3.16465751195892,2.7562988551756,2.74561413188081,8.62609239164127,4.83783231969054,2.18426371180192,2.77836765741823,3.22915344339442,1.92977408545347,3.32555742299888,0.757965647081939,0.651859905768103,0.678980343100753,1.17345124144251,1.50755631697634,1.42826184531608,1.95133647857799,1.41871629695572,1.32878813789265,1.59454768657487,2.78567635016755,2.41758974612254,2.02508682014116,3.01582567878545,2.17562273527484,0.983528546038072,1.65562047782839,2.24770825982909,2.46144541843627,0,3.02965112645248,1.89304931649754,1.17131623288992,1.72338718186239,2.38968797952552,3.34198011123591,2.54768877709949,1.61924280669958,2.33804686329049,1.97643888973262,1.92792789853084,3.12268187458191,2.13678724400706,0.488660878060728,2.14461159864296,1.32745138339963,0.728341908464944,2.11626489875326,2.45186603682668,0.885905678642318,1.84461088766356,4.39328098385976,2.54473610634254,2.85197902707777,5.05658812697306,5.27093042874994,2.06271086496374,6.12791290356818,1.26042765821917,2.97524972700335,3.85806663056866,3.90148514013002,2.14042581122485,2.13913726782757,2.74018454203139,1.17335854031855,0.42366414172764,2.64634077665954,0.65954501176592,0.484393280087717,0.72375509913787,0.238744688006273,0.984845398470368,4.08073171281791,2.03967832211561,2.05045056957423,1.03193433981611,0.555583582109135,0.753473828018764,1.23024804948923,1.14389086603261,1.69978429993855,0.979660166265606,0.829199842826543,2.86401185404534,0.790839983952838,0.609958401380546,1.94409613479242,1.04544148007234,2.40198820120795,1.34864346384821,0.991841468704031,3.92633912976044,2.85152941241944,2.4853572523477,1.12738587736838,0.897099276263873,1.82004339502807,1.36115831840833,1.42075805825504,0.675824501963113,1.05621514781179,1.5624526181274,1.25831213310853,0.966336483304024,1.72818003754719,1.89606672376907,3.44632865993279,2.56777392912068,2.5984164595559,4.65469408735452,1.98681354781265,2.52410443991935,2.21534290761866,2.22126189885925,2.59103142626999,1.91569751759997,0.877120926657772,1.53938946624527,3.27255326108393,2.49403421976732,0,0,0,2.31827512838629,1.87682475451182,1.28206136987086,1.50057865355346,2.00628841614145,4.51801474093653,4.14292712856459,2.86447756719698,1.54667864109319,3.42541259885321,3.7769694869485,2.70009000092722,3.15224842256954,2.71885445390523,4.14208249401456,0.31136204275253,2.39414924040619,1.36586884603307,1.45864030240976,0.419226325255965,2.02227859295016,1.55572709461131,2.67845574410562,0.64183841918363,1.51618327058278,3.8021894983536,2.45214243801899,2.34103768674706,2.11283002936069,2.35485422718014,2.85776214769844,2.89710814862139,2.70072908649187,2.06042950401653,1.91358596174717,2.40008476669791,3.37204031702741,2.14592570952589,1.59881058295561,2.1645157495526,2.96151127620868,3.10977553883713,1.05227884575137,1.90125759384206,1.68342681497322,2.96587545310435,2.26560309463796,3.6830793885272,1.70430525304563,1.35034627686799,1.49886346762768,1.87145286756327,1.93383948643468,1.53030665655075,1.76473135295612,2.08681052058379|short_description=p2@Tha1}}
|EntrezGene=71776
|HGNC=
|MCL_coexpression_id=24
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000153989_5end
|description=CAGE_peak_2_at_Tha1_5end
|id=chr11:117734778..117734795,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.53e-11!43;UBERON:0000344!3.29e-08!15;UBERON:0001242!1.51e-07!13;UBERON:0000060!1.51e-07!13;UBERON:0001262!1.51e-07!13;UBERON:0004786!1.51e-07!13;UBERON:0005409!3.85e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.74e-12,31;UBERON:0000344,2.80e-08,15;UBERON:0001242,1.30e-07,13;UBERON:0001262,1.30e-07,13;UBERON:0004786,1.30e-07,13
|phase1_expression=0.480446541314382,22.6834014965585,18.654968814971,28.1291716515352,32.0573267165662,2.85394762250213,5.37309073369709,2.32421982194837,1.40788722151667,2.10658073689794,0.34243593645101,0.717949430958028,4.10881751834894,2.79745287740792,0.666219523631325,1.01237633694913,0,2.05050407482854,3.83920414096069,2.12194825899015,2.72138528483423,1.29078236561151,0.783599367416806,2.71987118748791,5.27641346454491,12.0588712464154,6.46142994238612,6.89507944594845,9.31114755336232,6.80481350351813,5.76499327703792,0,0,0,3.17736781726402,1.99481574430191,3.67504841272264,0,0,0,0,0,0,0.881277725829041,1.21652317463417,1.28482726513177,0.782391344348039,3.48840250208714,0.439372365468944,1.55543919259427,0.979904951377538,1.43752564364972,1.67782606057736,0.725362142011344,1.00828139742739,0.257259436035947,2.86533439938757,2.06268836910977,1.01158230429799,1.5869729378161,3.80298842103708,0.677689064138264,1.77858959222228,0.899899717281399,0,2.8419204597844,0.898800331555214,3.84218305321555,0.622137673850866,0.810035629990144,0.210324961351382,1.14260393761521,0.883474163806454,0.857435594504678,1.24599112323707,3.67687514644008,6.60695285996332,1.53224805702225,2.61131106535614,1.45074916503213,2.10421580285542,0.52091337055676,3.35019598801657,1.68828783009504,3.81995619442025,2.06240009831567,1.70846016958924,0.931997229126503,1.13589289999776,0.68014404096107,3.47837386442013,4.30211938490693,1.3599426674155,2.15881276655127,4.54843492213368,1.79210754838934,2.10666630197628,2.04516387093669,1.29893002301434,1.41335829804136,2.39433813620357,0,0,0,0.432982082022428,0.253359865475099,1.01104889002957,4.33898742932428,3.36619248741323,3.41416919849097,2.60227990149204,3.65358573974569,2.30615497256059,2.11011696773672,1.76383060703557,3.76999773989026,2.47194967734374,3.32578520915797,0.884610551949874,1.13236794963186,1.32504911076236,0.969750506270444,3.72783522436244,3.80615036115011,2.51336048176146,9.45191104271788,0.958520996047362,1.19980546198682,0.635351135365324,3.59497534571574,4.57500602818627,1.13088916901578,3.99795936442236,4.60287823194595,2.0778804455956,2.43361894601636,1.73126918545538,1.36847667671102,1.26361379216837,1.47309299120532,1.69156575851515,1.14951052216736,1.26043490863744,1.80845781402858,2.04109497453984,2.17793324484245,1.87403449119458,1.81092359517311,0.215567992932842,0,1.05570674498369,0.657587197282725,1.11218899690239,2.089512999133,1.02891068203972,1.19420560091096,0.702213187313235,0.772043721344145,0,1.44988040774851,1.40715635988658,1.08037236876609,0.946978942340841,0.983821158737019,2.00547246753592,2.09280550275367,2.95100741539581,1.40118410840603,2.46839774870221,1.80584210487005,2.26992666728396,2.19299981137998,2.41505126820156,2.41571553768669,2.94405927989778,1.54356918568927,5.61711931072457,14.2803305998314,2.13288250535234,1.16118335930219,1.80414445850931,2.62188582010345,3.55804870151792,5.51654315726422,7.11793592316767,3.78807595865225,3.51869292320377,2.58643413653496,3.50935356814416,7.19055526923377,3.8904848977445,2.58883655230677,1.51734320762465,1.37098215131675,0,1.4255592949172,2.32742984601151,1.54298803758701,1.89709611372772,2.80459281161244,1.56998727841375,3.08492909804501,3.26097889795864,0.667380422864376,0.589676985339609,0.224862112384854,1.01430060694251,0.964708639009667,2.5462585178142,3.16465751195892,2.7562988551756,2.74561413188081,8.62609239164127,4.83783231969054,2.18426371180192,2.77836765741823,3.22915344339442,1.92977408545347,3.32555742299888,0.757965647081939,0.651859905768103,0.678980343100753,1.17345124144251,1.50755631697634,1.42826184531608,1.95133647857799,1.41871629695572,1.32878813789265,1.59454768657487,2.78567635016755,2.41758974612254,2.02508682014116,3.01582567878545,2.17562273527484,0.983528546038072,1.65562047782839,2.24770825982909,2.46144541843627,0,3.02965112645248,1.89304931649754,1.17131623288992,1.72338718186239,2.38968797952552,3.34198011123591,2.54768877709949,1.61924280669958,2.33804686329049,1.97643888973262,1.92792789853084,3.12268187458191,2.13678724400706,0.488660878060728,2.14461159864296,1.32745138339963,0.728341908464944,2.11626489875326,2.45186603682668,0.885905678642318,1.84461088766356,4.39328098385976,2.54473610634254,2.85197902707777,5.05658812697306,5.27093042874994,2.06271086496374,6.12791290356818,1.26042765821917,2.97524972700335,3.85806663056866,3.90148514013002,2.14042581122485,2.13913726782757,2.74018454203139,1.17335854031855,0.42366414172764,2.64634077665954,0.65954501176592,0.484393280087717,0.72375509913787,0.238744688006273,0.984845398470368,4.08073171281791,2.03967832211561,2.05045056957423,1.03193433981611,0.555583582109135,0.753473828018764,1.23024804948923,1.14389086603261,1.69978429993855,0.979660166265606,0.829199842826543,2.86401185404534,0.790839983952838,0.609958401380546,1.94409613479242,1.04544148007234,2.40198820120795,1.34864346384821,0.991841468704031,3.92633912976044,2.85152941241944,2.4853572523477,1.12738587736838,0.897099276263873,1.82004339502807,1.36115831840833,1.42075805825504,0.675824501963113,1.05621514781179,1.5624526181274,1.25831213310853,0.966336483304024,1.72818003754719,1.89606672376907,3.44632865993279,2.56777392912068,2.5984164595559,4.65469408735452,1.98681354781265,2.52410443991935,2.21534290761866,2.22126189885925,2.59103142626999,1.91569751759997,0.877120926657772,1.53938946624527,3.27255326108393,2.49403421976732,0,0,0,2.31827512838629,1.87682475451182,1.28206136987086,1.50057865355346,2.00628841614145,4.51801474093653,4.14292712856459,2.86447756719698,1.54667864109319,3.42541259885321,3.7769694869485,2.70009000092722,3.15224842256954,2.71885445390523,4.14208249401456,0.31136204275253,2.39414924040619,1.36586884603307,1.45864030240976,0.419226325255965,2.02227859295016,1.55572709461131,2.67845574410562,0.64183841918363,1.51618327058278,3.8021894983536,2.45214243801899,2.34103768674706,2.11283002936069,2.35485422718014,2.85776214769844,2.89710814862139,2.70072908649187,2.06042950401653,1.91358596174717,2.40008476669791,3.37204031702741,2.14592570952589,1.59881058295561,2.1645157495526,2.96151127620868,3.10977553883713,1.05227884575137,1.90125759384206,1.68342681497322,2.96587545310435,2.26560309463796,3.6830793885272,1.70430525304563,1.35034627686799,1.49886346762768,1.87145286756327,1.93383948643468,1.53030665655075,1.76473135295612,2.08681052058379
|short_description=p2@Tha1
}}

Revision as of 18:57, 12 September 2013

Short description:p2@Tha1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Tha1_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000153989_5end
EntrezGene:Tha1
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p2@Tha1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I522.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I328.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I432.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B99.31
Ileum epithelium, pool2.CNhs13232.10253-104C16.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A314.28
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I12.80
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
intestine1.74e-1231
mucosa2.80e-0815
intestinal mucosa1.30e-0713
wall of intestine1.30e-0713
gastrointestinal system mucosa1.30e-0713







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.