FFCP PHASE1:Mm9::chr11:27827040..27827043,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=550|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:27827040..27827043,+|id=chr11:27827040..27827043,+|ontology_enrichment_celltype=CL:0000239!8.69e-19!6;CL:0000677!8.69e-19!6;CL:0000212!8.69e-19!6;CL:0000584!8.69e-19!6;CL:0000066!1.01e-16!25;CL:0002076!2.90e-16!15;CL:0000075!3.75e-16!7;CL:0002563!1.25e-12!9;CL:0002251!1.25e-12!9;CL:0000223!3.87e-12!20;CL:0000068!5.56e-10!3;CL:0002202!5.56e-10!3;CL:0000069!5.56e-10!3;CL:0002632!5.56e-10!3;CL:0002368!5.56e-10!3;CL:0000307!5.56e-10!3;CL:0000377!5.56e-10!3;CL:0000473!1.14e-09!3;CL:0000627!1.14e-09!3;CL:0000682!1.14e-09!3|ontology_enrichment_celltype_v019_2=CL:0000239,1.60e-22,6;CL:0000677,1.60e-22,6;CL:0000584,1.60e-22,6;CL:0000075,1.96e-19,7;CL:0002563,2.64e-15,9;CL:0002251,2.64e-15,9;CL:0002076,1.73e-09,15;CL:0000223,2.75e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.86e-36!15;UBERON:0001242!2.91e-25!13;UBERON:0000060!2.91e-25!13;UBERON:0001262!2.91e-25!13;UBERON:0004786!2.91e-25!13;UBERON:0004923!2.48e-22!24;UBERON:0001962!6.53e-15!2;UBERON:0001961!6.53e-15!2;UBERON:0001744!6.53e-15!2;UBERON:0003350!1.25e-12!9;UBERON:0004808!1.25e-12!9;UBERON:0001277!1.25e-12!9;UBERON:0000485!2.21e-10!11;UBERON:0002465!2.97e-10!3;UBERON:0000331!5.01e-10!3;UBERON:0002116!5.01e-10!3;UBERON:0001204!5.01e-10!3;UBERON:0001168!5.01e-10!3;UBERON:0003126!5.56e-10!3;UBERON:0001005!5.56e-10!3;UBERON:0007196!5.56e-10!3;UBERON:0001558!5.56e-10!3;UBERON:0003199!2.54e-08!1;UBERON:0000160!2.67e-07!43;UBERON:0000064!2.88e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.27e-35,15;UBERON:0001962,1.31e-29,2;UBERON:0001961,1.31e-29,2;UBERON:0001744,1.31e-29,2;UBERON:0004923,3.63e-22,24;UBERON:0002465,3.89e-20,3;UBERON:0001242,1.60e-18,13;UBERON:0001262,1.60e-18,13;UBERON:0004786,1.60e-18,13;UBERON:0003199,9.51e-16,1;UBERON:0003350,2.64e-15,9;UBERON:0004808,2.64e-15,9;UBERON:0001277,2.64e-15,9;UBERON:0000485,1.14e-12,11;UBERON:0000160,4.27e-08,31|phase1_expression=0,0.348975407639361,0,9.98131897312539,8.01433167914156,0,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23970448894286,7.79991555628378,0,0.430761996159075,0.215471232685889,9.88121781173144,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:27827040..27827043,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=550 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:27827040..27827043,+ | |||
|id=chr11:27827040..27827043,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.69e-19!6;CL:0000677!8.69e-19!6;CL:0000212!8.69e-19!6;CL:0000584!8.69e-19!6;CL:0000066!1.01e-16!25;CL:0002076!2.90e-16!15;CL:0000075!3.75e-16!7;CL:0002563!1.25e-12!9;CL:0002251!1.25e-12!9;CL:0000223!3.87e-12!20;CL:0000068!5.56e-10!3;CL:0002202!5.56e-10!3;CL:0000069!5.56e-10!3;CL:0002632!5.56e-10!3;CL:0002368!5.56e-10!3;CL:0000307!5.56e-10!3;CL:0000377!5.56e-10!3;CL:0000473!1.14e-09!3;CL:0000627!1.14e-09!3;CL:0000682!1.14e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.60e-22,6;CL:0000677,1.60e-22,6;CL:0000584,1.60e-22,6;CL:0000075,1.96e-19,7;CL:0002563,2.64e-15,9;CL:0002251,2.64e-15,9;CL:0002076,1.73e-09,15;CL:0000223,2.75e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.86e-36!15;UBERON:0001242!2.91e-25!13;UBERON:0000060!2.91e-25!13;UBERON:0001262!2.91e-25!13;UBERON:0004786!2.91e-25!13;UBERON:0004923!2.48e-22!24;UBERON:0001962!6.53e-15!2;UBERON:0001961!6.53e-15!2;UBERON:0001744!6.53e-15!2;UBERON:0003350!1.25e-12!9;UBERON:0004808!1.25e-12!9;UBERON:0001277!1.25e-12!9;UBERON:0000485!2.21e-10!11;UBERON:0002465!2.97e-10!3;UBERON:0000331!5.01e-10!3;UBERON:0002116!5.01e-10!3;UBERON:0001204!5.01e-10!3;UBERON:0001168!5.01e-10!3;UBERON:0003126!5.56e-10!3;UBERON:0001005!5.56e-10!3;UBERON:0007196!5.56e-10!3;UBERON:0001558!5.56e-10!3;UBERON:0003199!2.54e-08!1;UBERON:0000160!2.67e-07!43;UBERON:0000064!2.88e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.27e-35,15;UBERON:0001962,1.31e-29,2;UBERON:0001961,1.31e-29,2;UBERON:0001744,1.31e-29,2;UBERON:0004923,3.63e-22,24;UBERON:0002465,3.89e-20,3;UBERON:0001242,1.60e-18,13;UBERON:0001262,1.60e-18,13;UBERON:0004786,1.60e-18,13;UBERON:0003199,9.51e-16,1;UBERON:0003350,2.64e-15,9;UBERON:0004808,2.64e-15,9;UBERON:0001277,2.64e-15,9;UBERON:0000485,1.14e-12,11;UBERON:0000160,4.27e-08,31 | |||
|phase1_expression=0,0.348975407639361,0,9.98131897312539,8.01433167914156,0,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23970448894286,7.79991555628378,0,0.430761996159075,0.215471232685889,9.88121781173144,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:27827040..27827043,+ | |||
}} |
Revision as of 19:19, 12 September 2013
Short description: | p@chr11:27827040..27827043, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:27827040..27827043, + |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.60e-22 | 6 |
gut absorptive cell | 1.60e-22 | 6 |
enterocyte | 1.60e-22 | 6 |
columnar/cuboidal epithelial cell | 1.96e-19 | 7 |
intestinal epithelial cell | 2.64e-15 | 9 |
epithelial cell of alimentary canal | 2.64e-15 | 9 |
endo-epithelial cell | 1.73e-09 | 15 |
endodermal cell | 2.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.27e-35 | 15 |
gut-associated lymphoid tissue | 1.31e-29 | 2 |
mucosa-associated lymphoid tissue | 1.31e-29 | 2 |
lymphoid tissue | 1.31e-29 | 2 |
organ component layer | 3.63e-22 | 24 |
lymphoid system | 3.89e-20 | 3 |
intestinal mucosa | 1.60e-18 | 13 |
wall of intestine | 1.60e-18 | 13 |
gastrointestinal system mucosa | 1.60e-18 | 13 |
egg chamber | 9.51e-16 | 1 |
epithelium of mucosa | 2.64e-15 | 9 |
gastrointestinal system epithelium | 2.64e-15 | 9 |
intestinal epithelium | 2.64e-15 | 9 |
simple columnar epithelium | 1.14e-12 | 11 |
intestine | 4.27e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.