FFCP PHASE1:Hg19::chr2:9614652..9614697,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285148|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27696|TSSclassifier=S|UniProt=B4DMV3,F8WF34,Q2TAA2|association_with_transcript=0bp_to_ENST00000470914,ENST00000492223,ENST00000495050,ENST00000497473,NM_001039613,uc002qzr.2,uc002qzs.2,uc002qzt.2,uc010yiz.1_5end|description=CAGE_peak_1_at_IAH1_5end|id=chr2:9614652..9614697,+|ontology_enrichment_celltype=CL:0000055!1.31e-19!180;CL:0000057!2.40e-12!75;CL:0000680!9.80e-10!57;CL:0000056!9.80e-10!57;CL:0000355!9.80e-10!57;CL:0000187!4.02e-09!54;CL:0000183!5.94e-08!59;CL:0000192!1.31e-07!42;CL:0000514!1.31e-07!42;CL:0000393!1.76e-07!60;CL:0000211!1.76e-07!60|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,8.04e-13,76;CL:0000680,4.30e-10,58;CL:0000056,4.30e-10,58;CL:0000355,4.30e-10,58;CL:0000187,1.77e-09,55;CL:0000192,5.81e-08,43;CL:0000514,5.81e-08,43;CL:0000393,8.45e-08,61;CL:0000211,8.45e-08,61;CL:0000222,9.82e-07,121|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!3.69e-16!83;UBERON:0002329!3.69e-16!83;UBERON:0003077!3.69e-16!83;UBERON:0003059!3.69e-16!83;UBERON:0007282!3.69e-16!83;UBERON:0009618!3.69e-16!83;UBERON:0007285!3.69e-16!83;UBERON:0000486!2.08e-12!82;UBERON:0004290!8.42e-12!70;UBERON:0001134!1.49e-09!61;UBERON:0002036!1.49e-09!61;UBERON:0003082!1.49e-09!61;UBERON:0002385!3.05e-09!63;UBERON:0001015!3.05e-09!63;UBERON:0000383!3.05e-09!63;UBERON:0005256!3.75e-09!143;UBERON:0002100!9.61e-09!216;UBERON:0000475!1.00e-07!365|ontology_enrichment_uberon_v019=UBERON:0000075;8.61e-08;16|ontology_enrichment_uberon_v019_2=UBERON:0000486,9.09e-13,83;UBERON:0007524,2.53e-12,73;UBERON:0002329,3.63e-12,71;UBERON:0003059,3.63e-12,71;UBERON:0007282,3.63e-12,71;UBERON:0004290,3.63e-12,71;UBERON:0009618,3.63e-12,71;UBERON:0003077,6.77e-12,72;UBERON:0007285,6.77e-12,72;UBERON:0007503,4.63e-10,78;UBERON:0001134,6.67e-10,62;UBERON:0002036,6.67e-10,62;UBERON:0003082,6.67e-10,62;UBERON:0002385,1.39e-09,64;UBERON:0001015,1.39e-09,64;UBERON:0000383,1.39e-09,64;UBERON:0003104,8.05e-08,160;UBERON:0009142,8.05e-08,160;UBERON:0000075,8.64e-08,16|phase1_expression=60.3172219178248,76.005685981299,67.9400227742581,82.0601046495669,81.3469191857664,82.872159789535,55.7259731970283,44.852111013305,72.3484190113553,56.518805395347,30.7032513907868,57.013198125975,62.249006861915,97.6516524854768,96.1052389610956,68.5771649380811,77.144899587069,75.2219393098994,76.1175166113191,90.7402198025927,69.9722370967788,23.5091041108566,78.1424244867785,59.9509981819233,88.2564756351464,39.5057307716908,36.9452652524756,39.2766798755259,16.1279353508051,18.039981710569,29.1054311834223,65.2789069380038,26.2049149337078,72.8415400028572,31.7615522379237,0,38.461657552865,27.6997704265939,28.27676709329,27.5603805809132,40.9765317859062,48.5840499028469,48.4242067152271,32.7146037254021,38.5433462562586,30.8081757708527,26.0320521334367,25.0812411693314,27.5638670096642,29.9200088015036,28.1776777182011,32.1615832648476,28.958637181876,20.0100251910986,21.6682378550947,26.9186545545925,24.2886473551483,29.214052977861,22.6502080354468,18.9348125974895,19.1801137739712,37.6030482212856,29.5206213280015,22.5899117782328,24.3775760448011,24.9649498864101,18.6846674698673,30.9035858265794,26.5956288394303,29.3204940351907,30.8753746343018,19.5187147073409,21.5194423459801,57.6726931631601,47.4107588922047,58.2851034513285,53.0191139011457,47.756251923599,34.3952755531751,55.007459542061,47.7400025277816,52.4246121304499,59.8387231168497,39.3219800108735,64.044666278176,47.7937849274488,40.4399946906373,47.1297000762676,37.6795577487371,37.2080964268792,26.7530095481441,22.3150131960957,23.318666915639,31.7211188589662,28.5859367120583,39.5076127162616,31.0801436779856,30.6548394944348,30.2234203529279,50.9918810941568,47.5846509285042,30.3006595670229,64.2928203746107,67.8489682430707,57.1535460501184,56.712677013407,49.8279109327629,62.6366553458552,66.4603266030978,75.9703119268984,80.9705552112536,57.9606171470105,41.0753779958907,46.0170224314307,41.8142095219907,56.8812900341782,46.7529002194344,48.4514698130508,39.7240916470619,48.4219429772627,43.62259140838,65.5811910669378,47.4311625094984,48.3789390163702,57.4681342140791,44.9876778883632,54.1944477967891,26.6120901056647,30.7556225151033,30.1234760076222,39.0090986102339,85.1790091823618,72.6259351271252,77.3479786102972,114.806381535619,110.228200929187,78.7333087580588,79.3214838593296,68.3486728096211,72.727242367721,68.2476284835589,41.4548773950261,31.3293947931586,36.7076598356585,56.7957938895696,65.9951704364223,66.8778541409892,44.3592561207936,45.7595928624102,51.26113518348,34.1871340670733,43.8719643504123,39.5740171832657,36.1797082831366,31.4624577157429,27.5118041940067,37.6190939766259,31.7852613778275,27.7497684895634,25.7734871828796,49.9508353215342,83.6299316290364,57.1105214662717,48.89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016686472783,40.3127359952019,79.4717970691869,37.5126725391884,0,41.4342951300545,71.858057901484,43.7643548327197,48.4268421140585,34.7233818121989,45.7862149600007,77.6704228805872,35.6367548457168,56.0718631579903,61.203193037148,25.6802479555587,37.4991285114801,37.6637768885083,50.3781451516404,37.7919237643154,23.2400209826114,29.2694328391679,63.9650275201571,45.9475394923382,43.2127122307918,59.0969204419841,53.9472299176535,39.403532610958,39.9073598386645,29.7088493112616,50.2237296280223,138.409585971136,161.95782219371,37.6681387810979,1.73814972905999,91.5982431900827,30.2513393806488,56.921506895848,45.3803399517051,47.2890181550241,26.9591268107496,41.7320538055669,39.2862242425477,42.9475559986155,33.8709640152743,55.6729690562042,77.8618028017443,68.7988036063752,38.0308468112494,0,59.9836190912766,49.8520204634679,46.3009258921674,51.0318349788808,35.9426134863763,18.9490965404306,66.6485096790583,32.1084245099435,30.4954421505192,49.8030540856794,71.7073506941699,42.2914386431537,36.062327483153,21.1642783362685,51.4811475683202,75.4164950725203,38.6727680216442,34.7544288382691,41.4202613031732,76.8070558388932,32.0485160311301,26.5566498451138,42.3750501121699,57.1372603538104,22.93816666152,19.6591348388462,38.7078285770654,35.3221548221496,41.5684791139209,66.4218276833307,39.9110047420669,75.9250201192257,42.322147241232,82.5828940330188,103.527340813438,93.8799639808622,0,0,57.5211194591924,13.1565590367156,10.1542614000913,0,9.0254714145255,60.6987372728098,75.2979205738862,37.3126247756451,33.9260226427016,34.5439050679589,43.8038553893282,30.0338430737428,29.0509662904615,45.9740636580515,43.7892448953775,45.0721331376829,38.9712978735561,64.3398606040328,32.665745712075,30.4102150864948,46.9051102729879,46.4812663768664,55.0713104729012,17.3765054058246,96.4722670624743,70.3922827210363,40.7064009128945,54.1171917159932,30.6248116125336,37.8394731951129,67.3193833836789|short_description=p1@IAH1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=285148 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27696 | |||
|TSSclassifier=S | |||
|UniProt=B4DMV3,F8WF34,Q2TAA2 | |||
|association_with_transcript=0bp_to_ENST00000470914,ENST00000492223,ENST00000495050,ENST00000497473,NM_001039613,uc002qzr.2,uc002qzs.2,uc002qzt.2,uc010yiz.1_5end | |||
|description=CAGE_peak_1_at_IAH1_5end | |||
|id=chr2:9614652..9614697,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-19!180;CL:0000057!2.40e-12!75;CL:0000680!9.80e-10!57;CL:0000056!9.80e-10!57;CL:0000355!9.80e-10!57;CL:0000187!4.02e-09!54;CL:0000183!5.94e-08!59;CL:0000192!1.31e-07!42;CL:0000514!1.31e-07!42;CL:0000393!1.76e-07!60;CL:0000211!1.76e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.04e-13,76;CL:0000680,4.30e-10,58;CL:0000056,4.30e-10,58;CL:0000355,4.30e-10,58;CL:0000187,1.77e-09,55;CL:0000192,5.81e-08,43;CL:0000514,5.81e-08,43;CL:0000393,8.45e-08,61;CL:0000211,8.45e-08,61;CL:0000222,9.82e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.69e-16!83;UBERON:0002329!3.69e-16!83;UBERON:0003077!3.69e-16!83;UBERON:0003059!3.69e-16!83;UBERON:0007282!3.69e-16!83;UBERON:0009618!3.69e-16!83;UBERON:0007285!3.69e-16!83;UBERON:0000486!2.08e-12!82;UBERON:0004290!8.42e-12!70;UBERON:0001134!1.49e-09!61;UBERON:0002036!1.49e-09!61;UBERON:0003082!1.49e-09!61;UBERON:0002385!3.05e-09!63;UBERON:0001015!3.05e-09!63;UBERON:0000383!3.05e-09!63;UBERON:0005256!3.75e-09!143;UBERON:0002100!9.61e-09!216;UBERON:0000475!1.00e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;8.61e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,9.09e-13,83;UBERON:0007524,2.53e-12,73;UBERON:0002329,3.63e-12,71;UBERON:0003059,3.63e-12,71;UBERON:0007282,3.63e-12,71;UBERON:0004290,3.63e-12,71;UBERON:0009618,3.63e-12,71;UBERON:0003077,6.77e-12,72;UBERON:0007285,6.77e-12,72;UBERON:0007503,4.63e-10,78;UBERON:0001134,6.67e-10,62;UBERON:0002036,6.67e-10,62;UBERON:0003082,6.67e-10,62;UBERON:0002385,1.39e-09,64;UBERON:0001015,1.39e-09,64;UBERON:0000383,1.39e-09,64;UBERON:0003104,8.05e-08,160;UBERON:0009142,8.05e-08,160;UBERON:0000075,8.64e-08,16 | |||
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| |||
|short_description=p1@IAH1 | |||
}} |
Revision as of 20:14, 12 September 2013
Short description: | p1@IAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_IAH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470914, ENST00000492223, ENST00000495050, ENST00000497473, NM_001039613, uc002qzr.2, uc002qzs.2, uc002qzt.2, uc010yiz.1_5end |
EntrezGene: | IAH1 |
HGNC: | 27696 |
UniProt: | B4DMV3F8WF34Q2TAA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.04e-13 | 76 |
muscle precursor cell | 4.30e-10 | 58 |
myoblast | 4.30e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.30e-10 | 58 |
muscle cell | 1.77e-09 | 55 |
smooth muscle cell | 5.81e-08 | 43 |
smooth muscle myoblast | 5.81e-08 | 43 |
electrically responsive cell | 8.45e-08 | 61 |
electrically active cell | 8.45e-08 | 61 |
mesodermal cell | 9.82e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 9.09e-13 | 83 |
dense mesenchyme tissue | 2.53e-12 | 73 |
somite | 3.63e-12 | 71 |
presomitic mesoderm | 3.63e-12 | 71 |
presumptive segmental plate | 3.63e-12 | 71 |
dermomyotome | 3.63e-12 | 71 |
trunk paraxial mesoderm | 3.63e-12 | 71 |
paraxial mesoderm | 6.77e-12 | 72 |
presumptive paraxial mesoderm | 6.77e-12 | 72 |
epithelial vesicle | 4.63e-10 | 78 |
skeletal muscle tissue | 6.67e-10 | 62 |
striated muscle tissue | 6.67e-10 | 62 |
myotome | 6.67e-10 | 62 |
muscle tissue | 1.39e-09 | 64 |
musculature | 1.39e-09 | 64 |
musculature of body | 1.39e-09 | 64 |
mesenchyme | 8.05e-08 | 160 |
entire embryonic mesenchyme | 8.05e-08 | 160 |
subdivision of skeletal system | 8.64e-08 | 16 |
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