FFCP PHASE1:Mm9::chr11:69810795..69810830,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69810795..69810830,-|id=chr11:69810795..69810830,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,1.49e-07,9;CL:0000789,1.49e-07,9;CL:0002420,1.49e-07,9;CL:0002419,1.49e-07,9;CL:0000790,1.49e-07,9;CL:0000624,3.54e-07,8;CL:0000075,7.11e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.15e-08,69;UBERON:0006562,2.44e-08,24;UBERON:0001557,2.44e-08,24;UBERON:0001042,2.44e-08,24;UBERON:0008814,2.44e-08,24;UBERON:0009145,2.44e-08,24;UBERON:0003408,4.65e-08,24;UBERON:0002370,7.26e-08,23;UBERON:0000974,7.26e-08,23;UBERON:0004807,7.26e-08,23;UBERON:0005058,7.26e-08,23;UBERON:0003351,7.26e-08,23;UBERON:0009113,7.26e-08,23;UBERON:0003295,7.26e-08,23;UBERON:0009722,7.26e-08,23;UBERON:0005562,7.26e-08,23;UBERON:0007690,7.26e-08,23;UBERON:0007811,7.54e-08,36;UBERON:0003929,1.91e-07,55;UBERON:0001004,2.11e-07,42;UBERON:0000065,3.39e-07,41;UBERON:0000490,3.80e-07,66|phase1_expression=0.960893082628764,6.2815573375085,5.0049916332849,5.44435580352294,8.5152274090879,2.51818907867835,2.10251376535973,2.1950964985068,10.559154161375,14.9801296846076,3.08192342805909,4.22792442675283,1.19840510951844,2.53519167015092,0.666219523631325,0.404950534779652,0,0.946386496074713,1.37114433605739,2.54633791078818,1.19060606211498,0.397163804803541,0,0.639969691173627,0,4.01962374880514,1.7230479846363,1.939241094173,0.380046838912748,0.504060259519861,0.886922042621219,1.90509202037889,5.53558308826113,0,2.3108129580102,0.997407872150954,2.6542016314108,0.418531630736908,0,2.09409497589519,0.588231488031014,0.683045484958446,0,1.51076181570693,1.01376931219515,1.65192076945513,0.782391344348039,0,0.219686182734472,0.58328969722285,0,0,2.18117387875057,2.90144856804538,1.68046899571232,0,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0,0.299600110518405,0.768436610643109,0.622137673850866,0.270011876663381,0.210324961351382,0,0.220868540951614,0.244981598429908,0.575072826109418,0.919218786610021,0,0.510749352340751,0.46081959976873,0.263772575460388,0.548925861614458,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.681535739998656,0.529000920747499,3.18850937571846,0,1.3599426674155,0,0,0.448026887097336,0.702222100658759,0.852151612890289,1.81850203222008,1.7666978725517,1.83096445709685,0,7.64415719119937,0,0.865964164044856,0.253359865475099,0,0.45673551887624,7.25026074212081,0.742210695324124,0.867426633830679,0.304465478312141,2.30615497256059,0.753613202763113,0.470354828542819,1.38233250462643,0.988779870937496,1.59059292611903,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,1.86391761218122,0.292780797011547,0,0.766371165625774,0.599075622529601,1.19980546198682,0.635351135365324,0.149790639404823,0.457500602818626,0.376963056338593,0.521472960576829,0,0,0.162241263067758,0.101839363850316,0.622034853050465,0.252722758433675,0.841767423545896,1.43132487258974,1.14951052216736,0.900310649026746,2.10986744970001,0.748401490664606,1.5373646434182,1.12442069471675,0.258703370739016,0.646703978798527,0.756424320671277,0.879755620819744,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,1.79130840136644,0.702213187313235,0.772043721344145,0.852490498186778,0.621377317606506,0.938104239924385,0.540186184383045,0,0,0.771335564436891,1.16266972375204,1.3413670069981,0.467061369468678,0.16455984991348,0.164167464079095,1.29710095273369,0.877199924551994,0.219550115291051,0.402619256281115,0.420579897128254,0.411618449517138,1.32167513193519,0.793351699990633,0.639864751605702,2.78684006232526,0.77320476793256,0.403367049246685,1.33426826306922,0.380451252225118,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0.898819408654221,0,0.796565093017469,0.948339504765408,1.37098215131675,0,1.62921062276251,2.32742984601151,1.33258057791605,0.758838445491087,0.590440591918409,0.784993639206874,0.740382983530803,0.296452627087149,0.83422552858047,0.589676985339609,1.57403478669398,1.01430060694251,0.964708639009667,0.50925170356284,0.575392274901621,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,1.4473305640901,0.369506380333209,0.757965647081939,0.488894929326078,1.18821560042632,1.87752198630802,1.34005005953453,1.90434912708811,1.95133647857799,1.26108115284953,0.664394068946325,1.91345722388985,0.983179888294428,1.03610989119537,1.01254341007058,3.01582567878545,0.54390568381871,0,1.37968373152366,0.642202359951168,0.586058432961016,1.14754461763673,0,0.631016438832513,2.34263246577983,0.861693590931196,1.67278158566786,2.00518806674155,2.26461224631066,2.02405350837447,1.75353514746787,0.395287777946524,0,1.98716119291576,0.712262414669021,0.81443479676788,1.81467135269789,0,0.728341908464944,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,0,1.02131881726136,0.900305470156551,1.81102157295856,1.28602221018955,1.77340233642274,0.891844088010353,1.64549020602121,0.608929898229199,0.469343416127421,0.63549621259146,1.54369878638473,4.61681508236144,0.645857706783622,1.68876189798836,0.358117032009409,1.14898629821543,1.1659233465194,0.18542530201051,1.70870880797853,0.82554747185289,0.555583582109135,0.376736914009382,0.956859594047176,1.37266903923914,0.849892149969277,0.979660166265606,0.414599921413271,0.954670618015114,1.10717597753397,1.01659733563424,0.756037385752609,0.836353184057875,0.218362563746178,0,0.0826534557253359,0,1.03691978633434,1.24267862617385,1.69107881605257,2.0932316446157,1.65458490457098,1.16670713006429,1.29159823477731,1.18269287843545,0.821500670520278,1.8228613878153,1.57289016638566,2.65742532908607,2.30424005006292,1.58005560314089,1.62180172232131,1.23253148597793,0.51968329191118,1.25318686967237,1.58945083825012,0.961563596159751,1.03382669022204,2.1202954489111,1.295515713135,1.31074040677893,2.82627854145282,3.46362629905186,2.22066114144981,1.81384306892169,0,1.97370484540847,0,0.965947970160952,0.375364950902364,1.46521299413812,1.92931541171159,1.00314420807073,0,0,1.71868654031819,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,1.66059756134683,2.39414924040619,1.02440163452481,1.45864030240976,0.628839487883947,1.10306105070008,0.666740183404846,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,1.12369808963859,0.704276676453562,0.976402972245426,0,0.811190281613988,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.532427418478012,0.476872379894642,1.0174249164263,0.376437521661322,0.507687647350059,0.548783918618318,1.05227884575137,0.407412341537585,2.24456908663095,0.355905054372522,1.37906275325789,0.818462086339379,0.619747364743864,0.578719832943424,1.24905288968973,0.701794825336225,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843|short_description=p@chr11:69810795..69810830,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69810795..69810830,- | |||
|id=chr11:69810795..69810830,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.49e-07,9;CL:0000789,1.49e-07,9;CL:0002420,1.49e-07,9;CL:0002419,1.49e-07,9;CL:0000790,1.49e-07,9;CL:0000624,3.54e-07,8;CL:0000075,7.11e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.15e-08,69;UBERON:0006562,2.44e-08,24;UBERON:0001557,2.44e-08,24;UBERON:0001042,2.44e-08,24;UBERON:0008814,2.44e-08,24;UBERON:0009145,2.44e-08,24;UBERON:0003408,4.65e-08,24;UBERON:0002370,7.26e-08,23;UBERON:0000974,7.26e-08,23;UBERON:0004807,7.26e-08,23;UBERON:0005058,7.26e-08,23;UBERON:0003351,7.26e-08,23;UBERON:0009113,7.26e-08,23;UBERON:0003295,7.26e-08,23;UBERON:0009722,7.26e-08,23;UBERON:0005562,7.26e-08,23;UBERON:0007690,7.26e-08,23;UBERON:0007811,7.54e-08,36;UBERON:0003929,1.91e-07,55;UBERON:0001004,2.11e-07,42;UBERON:0000065,3.39e-07,41;UBERON:0000490,3.80e-07,66 | |||
|phase1_expression=0.960893082628764,6.2815573375085,5.0049916332849,5.44435580352294,8.5152274090879,2.51818907867835,2.10251376535973,2.1950964985068,10.559154161375,14.9801296846076,3.08192342805909,4.22792442675283,1.19840510951844,2.53519167015092,0.666219523631325,0.404950534779652,0,0.946386496074713,1.37114433605739,2.54633791078818,1.19060606211498,0.397163804803541,0,0.639969691173627,0,4.01962374880514,1.7230479846363,1.939241094173,0.380046838912748,0.504060259519861,0.886922042621219,1.90509202037889,5.53558308826113,0,2.3108129580102,0.997407872150954,2.6542016314108,0.418531630736908,0,2.09409497589519,0.588231488031014,0.683045484958446,0,1.51076181570693,1.01376931219515,1.65192076945513,0.782391344348039,0,0.219686182734472,0.58328969722285,0,0,2.18117387875057,2.90144856804538,1.68046899571232,0,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0,0.299600110518405,0.768436610643109,0.622137673850866,0.270011876663381,0.210324961351382,0,0.220868540951614,0.244981598429908,0.575072826109418,0.919218786610021,0,0.510749352340751,0.46081959976873,0.263772575460388,0.548925861614458,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0.372798891650601,0.681535739998656,0.529000920747499,3.18850937571846,0,1.3599426674155,0,0,0.448026887097336,0.702222100658759,0.852151612890289,1.81850203222008,1.7666978725517,1.83096445709685,0,7.64415719119937,0,0.865964164044856,0.253359865475099,0,0.45673551887624,7.25026074212081,0.742210695324124,0.867426633830679,0.304465478312141,2.30615497256059,0.753613202763113,0.470354828542819,1.38233250462643,0.988779870937496,1.59059292611903,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,1.86391761218122,0.292780797011547,0,0.766371165625774,0.599075622529601,1.19980546198682,0.635351135365324,0.149790639404823,0.457500602818626,0.376963056338593,0.521472960576829,0,0,0.162241263067758,0.101839363850316,0.622034853050465,0.252722758433675,0.841767423545896,1.43132487258974,1.14951052216736,0.900310649026746,2.10986744970001,0.748401490664606,1.5373646434182,1.12442069471675,0.258703370739016,0.646703978798527,0.756424320671277,0.879755620819744,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,1.79130840136644,0.702213187313235,0.772043721344145,0.852490498186778,0.621377317606506,0.938104239924385,0.540186184383045,0,0,0.771335564436891,1.16266972375204,1.3413670069981,0.467061369468678,0.16455984991348,0.164167464079095,1.29710095273369,0.877199924551994,0.219550115291051,0.402619256281115,0.420579897128254,0.411618449517138,1.32167513193519,0.793351699990633,0.639864751605702,2.78684006232526,0.77320476793256,0.403367049246685,1.33426826306922,0.380451252225118,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0.898819408654221,0,0.796565093017469,0.948339504765408,1.37098215131675,0,1.62921062276251,2.32742984601151,1.33258057791605,0.758838445491087,0.590440591918409,0.784993639206874,0.740382983530803,0.296452627087149,0.83422552858047,0.589676985339609,1.57403478669398,1.01430060694251,0.964708639009667,0.50925170356284,0.575392274901621,0.324270453550071,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.358794827043824,1.4473305640901,0.369506380333209,0.757965647081939,0.488894929326078,1.18821560042632,1.87752198630802,1.34005005953453,1.90434912708811,1.95133647857799,1.26108115284953,0.664394068946325,1.91345722388985,0.983179888294428,1.03610989119537,1.01254341007058,3.01582567878545,0.54390568381871,0,1.37968373152366,0.642202359951168,0.586058432961016,1.14754461763673,0,0.631016438832513,2.34263246577983,0.861693590931196,1.67278158566786,2.00518806674155,2.26461224631066,2.02405350837447,1.75353514746787,0.395287777946524,0,1.98716119291576,0.712262414669021,0.81443479676788,1.81467135269789,0,0.728341908464944,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0,1.05418608574999,0,1.02131881726136,0.900305470156551,1.81102157295856,1.28602221018955,1.77340233642274,0.891844088010353,1.64549020602121,0.608929898229199,0.469343416127421,0.63549621259146,1.54369878638473,4.61681508236144,0.645857706783622,1.68876189798836,0.358117032009409,1.14898629821543,1.1659233465194,0.18542530201051,1.70870880797853,0.82554747185289,0.555583582109135,0.376736914009382,0.956859594047176,1.37266903923914,0.849892149969277,0.979660166265606,0.414599921413271,0.954670618015114,1.10717597753397,1.01659733563424,0.756037385752609,0.836353184057875,0.218362563746178,0,0.0826534557253359,0,1.03691978633434,1.24267862617385,1.69107881605257,2.0932316446157,1.65458490457098,1.16670713006429,1.29159823477731,1.18269287843545,0.821500670520278,1.8228613878153,1.57289016638566,2.65742532908607,2.30424005006292,1.58005560314089,1.62180172232131,1.23253148597793,0.51968329191118,1.25318686967237,1.58945083825012,0.961563596159751,1.03382669022204,2.1202954489111,1.295515713135,1.31074040677893,2.82627854145282,3.46362629905186,2.22066114144981,1.81384306892169,0,1.97370484540847,0,0.965947970160952,0.375364950902364,1.46521299413812,1.92931541171159,1.00314420807073,0,0,1.71868654031819,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,1.66059756134683,2.39414924040619,1.02440163452481,1.45864030240976,0.628839487883947,1.10306105070008,0.666740183404846,0.618105171716683,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,1.12369808963859,0.704276676453562,0.976402972245426,0,0.811190281613988,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.532427418478012,0.476872379894642,1.0174249164263,0.376437521661322,0.507687647350059,0.548783918618318,1.05227884575137,0.407412341537585,2.24456908663095,0.355905054372522,1.37906275325789,0.818462086339379,0.619747364743864,0.578719832943424,1.24905288968973,0.701794825336225,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr11:69810795..69810830,- | |||
}} |
Revision as of 20:42, 12 September 2013
Short description: | p@chr11:69810795..69810830, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69810795..69810830, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.49e-07 | 9 |
alpha-beta T cell | 1.49e-07 | 9 |
immature T cell | 1.49e-07 | 9 |
mature T cell | 1.49e-07 | 9 |
immature alpha-beta T cell | 1.49e-07 | 9 |
CD4-positive, alpha-beta T cell | 3.54e-07 | 8 |
columnar/cuboidal epithelial cell | 7.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 2.15e-08 | 69 |
pharynx | 2.44e-08 | 24 |
upper respiratory tract | 2.44e-08 | 24 |
chordate pharynx | 2.44e-08 | 24 |
pharyngeal arch system | 2.44e-08 | 24 |
pharyngeal region of foregut | 2.44e-08 | 24 |
gland of gut | 4.65e-08 | 24 |
thymus | 7.26e-08 | 23 |
neck | 7.26e-08 | 23 |
respiratory system epithelium | 7.26e-08 | 23 |
hemolymphoid system gland | 7.26e-08 | 23 |
pharyngeal epithelium | 7.26e-08 | 23 |
thymic region | 7.26e-08 | 23 |
pharyngeal gland | 7.26e-08 | 23 |
entire pharyngeal arch endoderm | 7.26e-08 | 23 |
thymus primordium | 7.26e-08 | 23 |
early pharyngeal endoderm | 7.26e-08 | 23 |
craniocervical region | 7.54e-08 | 36 |
gut epithelium | 1.91e-07 | 55 |
respiratory system | 2.11e-07 | 42 |
respiratory tract | 3.39e-07 | 41 |
unilaminar epithelium | 3.80e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.