FFCP PHASE1:Hg19::chr3:112324210..112324254,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C401|description=CAGE_peak_at_chr3:112324210..112324254,-|id=chr3:112324210..112324254,-|ontology_enrichment_celltype=CL:0000055!2.53e-17!180;CL:0000057!2.06e-11!75;CL:0000680!1.06e-09!57;CL:0000056!1.06e-09!57;CL:0000355!1.06e-09!57;CL:0002334!7.10e-09!12;CL:0000136!1.54e-08!15;CL:0000187!2.48e-08!54;CL:0002620!4.63e-08!23;CL:0000393!1.04e-07!60;CL:0000211!1.04e-07!60;CL:0000183!9.51e-07!59|ontology_enrichment_celltype_v019=CL:0002334;1.35e-11;12!CL:0000136;2.02e-09;13!CL:1000306;8.31e-09;4!CL:0002547;8.31e-09;4!CL:0002620;2.87e-08;23!CL:0002615;1.50e-07;3!CL:0000135;3.36e-07;3!CL:0000388;3.36e-07;3!CL:0002579;4.52e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,4.23e-15,76;CL:0000136,6.78e-12,15;CL:0002334,2.17e-11,12;CL:1000306,5.81e-09,4;CL:0002547,5.81e-09,4;CL:0002320,1.16e-08,361;CL:0002620,2.48e-08,23;CL:0000134,3.58e-08,354;CL:0000048,5.12e-08,427;CL:0000723,1.17e-07,433;CL:0002615,1.68e-07,3;CL:0000034,3.37e-07,441;CL:0000135,3.46e-07,3;CL:0000388,3.46e-07,3;CL:0002579,6.59e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;4.78e-07;5!DOID:450;4.78e-07;5!DOID:66;4.78e-07;5!DOID:423;4.78e-07;5!DOID:0080000;4.78e-07;5!DOID:11722;4.78e-07;5|ontology_enrichment_disease_v019_2=DOID:17,3.36e-07,5;DOID:450,3.36e-07,5;DOID:66,3.36e-07,5;DOID:423,3.36e-07,5;DOID:0080000,3.36e-07,5;DOID:11722,3.36e-07,5|ontology_enrichment_uberon=UBERON:0002385!2.22e-10!63;UBERON:0001015!2.22e-10!63;UBERON:0000383!2.22e-10!63;UBERON:0001134!8.55e-10!61;UBERON:0002036!8.55e-10!61;UBERON:0003082!8.55e-10!61;UBERON:0004290!3.14e-09!70;UBERON:0000948!2.66e-08!24;UBERON:0005498!2.66e-08!24;UBERON:0004140!2.66e-08!24;UBERON:0009881!2.66e-08!24;UBERON:0004141!2.66e-08!24;UBERON:0003084!2.66e-08!24;UBERON:0007005!2.66e-08!24;UBERON:0004139!2.66e-08!24;UBERON:0004291!2.66e-08!24;UBERON:0000914!3.58e-08!83;UBERON:0002329!3.58e-08!83;UBERON:0003077!3.58e-08!83;UBERON:0003059!3.58e-08!83;UBERON:0007282!3.58e-08!83;UBERON:0009618!3.58e-08!83;UBERON:0007285!3.58e-08!83;UBERON:0000486!7.10e-08!82;UBERON:0007100!2.19e-07!27;UBERON:0004872!4.60e-07!84;UBERON:0001013!5.89e-07!14;UBERON:0003688!9.76e-07!6;UBERON:0002358!9.76e-07!6;UBERON:0003684!9.76e-07!6;UBERON:0001178!9.76e-07!6|ontology_enrichment_uberon_v019=UBERON:0004457;1.69e-14;9!UBERON:0000042;1.69e-14;9!UBERON:0003688;5.84e-13;6!UBERON:0002358;5.84e-13;6!UBERON:0003684;5.84e-13;6!UBERON:0001178;5.84e-13;6!UBERON:0001013;2.56e-09;14!UBERON:0004797;8.31e-09;4!UBERON:0000415;8.31e-09;4!UBERON:0007240;8.31e-09;4!UBERON:0005742;8.31e-09;4!UBERON:0005734;8.31e-09;4!UBERON:0004664;8.31e-09;4!UBERON:0004663;8.31e-09;4!UBERON:0002199;1.41e-07;46!UBERON:0002416;1.41e-07;46!UBERON:0007846;3.36e-07;3!UBERON:0000043;3.36e-07;3!UBERON:0007845;3.36e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.54e-13,6;UBERON:0002358,9.54e-13,6;UBERON:0003684,9.54e-13,6;UBERON:0001178,9.54e-13,6;UBERON:0004797,1.23e-10,7;UBERON:0004457,2.65e-10,12;UBERON:0000042,2.65e-10,12;UBERON:0002199,2.77e-10,46;UBERON:0002416,2.77e-10,46;UBERON:0002384,1.80e-09,371;UBERON:0001013,2.17e-09,14;UBERON:0000415,5.81e-09,4;UBERON:0007240,5.81e-09,4;UBERON:0005742,5.81e-09,4;UBERON:0005734,5.81e-09,4;UBERON:0004664,5.81e-09,4;UBERON:0004663,5.81e-09,4;UBERON:0002097,2.34e-08,41;UBERON:0007846,3.46e-07,3;UBERON:0000043,3.46e-07,3;UBERON:0007845,3.46e-07,3|phase1_expression=3.08853244759946,6.20891519283851,6.48390258841467,6.00439790118782,4.02264984984559,10.4680622892044,2.53299878168311,0.631719873426831,1.04474251279935,0,0,1.52908960491121,0.527533956456907,1.36142988256051,1.65698687863958,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3233045996527,0.670700859703636,0.895037932904712,1.44575660953827,1.00267582127178,4.49024208778554,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96366342034382,4.05217637326655,1.85372853138506,11.7603014507014,3.54668382198357,2.24271040056923,0,0.98667019366864,0.311211035399766,0,0,0,1.15235184896,0,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0.567160915800105,4.48474089222155,2.98980344345994,4.23863802319124,2.70081986475962,0.309157587715317,2.31876486041066,1.30281799432113,2.86919764810153,0.68205903612839,2.01947019395292,2.57739716198438,0.969876340912871,6.7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0,0,0.122241444182866,2.03448089157869,0,0.201273793591026,0|short_description=p@chr3:112324210..112324254,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_at_chr3:112324210..112324254,- | |||
|id=chr3:112324210..112324254,- | |||
|ontology_enrichment_celltype=CL:0000055!2.53e-17!180;CL:0000057!2.06e-11!75;CL:0000680!1.06e-09!57;CL:0000056!1.06e-09!57;CL:0000355!1.06e-09!57;CL:0002334!7.10e-09!12;CL:0000136!1.54e-08!15;CL:0000187!2.48e-08!54;CL:0002620!4.63e-08!23;CL:0000393!1.04e-07!60;CL:0000211!1.04e-07!60;CL:0000183!9.51e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.35e-11;12!CL:0000136;2.02e-09;13!CL:1000306;8.31e-09;4!CL:0002547;8.31e-09;4!CL:0002620;2.87e-08;23!CL:0002615;1.50e-07;3!CL:0000135;3.36e-07;3!CL:0000388;3.36e-07;3!CL:0002579;4.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.23e-15,76;CL:0000136,6.78e-12,15;CL:0002334,2.17e-11,12;CL:1000306,5.81e-09,4;CL:0002547,5.81e-09,4;CL:0002320,1.16e-08,361;CL:0002620,2.48e-08,23;CL:0000134,3.58e-08,354;CL:0000048,5.12e-08,427;CL:0000723,1.17e-07,433;CL:0002615,1.68e-07,3;CL:0000034,3.37e-07,441;CL:0000135,3.46e-07,3;CL:0000388,3.46e-07,3;CL:0002579,6.59e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.78e-07;5!DOID:450;4.78e-07;5!DOID:66;4.78e-07;5!DOID:423;4.78e-07;5!DOID:0080000;4.78e-07;5!DOID:11722;4.78e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.36e-07,5;DOID:450,3.36e-07,5;DOID:66,3.36e-07,5;DOID:423,3.36e-07,5;DOID:0080000,3.36e-07,5;DOID:11722,3.36e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.22e-10!63;UBERON:0001015!2.22e-10!63;UBERON:0000383!2.22e-10!63;UBERON:0001134!8.55e-10!61;UBERON:0002036!8.55e-10!61;UBERON:0003082!8.55e-10!61;UBERON:0004290!3.14e-09!70;UBERON:0000948!2.66e-08!24;UBERON:0005498!2.66e-08!24;UBERON:0004140!2.66e-08!24;UBERON:0009881!2.66e-08!24;UBERON:0004141!2.66e-08!24;UBERON:0003084!2.66e-08!24;UBERON:0007005!2.66e-08!24;UBERON:0004139!2.66e-08!24;UBERON:0004291!2.66e-08!24;UBERON:0000914!3.58e-08!83;UBERON:0002329!3.58e-08!83;UBERON:0003077!3.58e-08!83;UBERON:0003059!3.58e-08!83;UBERON:0007282!3.58e-08!83;UBERON:0009618!3.58e-08!83;UBERON:0007285!3.58e-08!83;UBERON:0000486!7.10e-08!82;UBERON:0007100!2.19e-07!27;UBERON:0004872!4.60e-07!84;UBERON:0001013!5.89e-07!14;UBERON:0003688!9.76e-07!6;UBERON:0002358!9.76e-07!6;UBERON:0003684!9.76e-07!6;UBERON:0001178!9.76e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.69e-14;9!UBERON:0000042;1.69e-14;9!UBERON:0003688;5.84e-13;6!UBERON:0002358;5.84e-13;6!UBERON:0003684;5.84e-13;6!UBERON:0001178;5.84e-13;6!UBERON:0001013;2.56e-09;14!UBERON:0004797;8.31e-09;4!UBERON:0000415;8.31e-09;4!UBERON:0007240;8.31e-09;4!UBERON:0005742;8.31e-09;4!UBERON:0005734;8.31e-09;4!UBERON:0004664;8.31e-09;4!UBERON:0004663;8.31e-09;4!UBERON:0002199;1.41e-07;46!UBERON:0002416;1.41e-07;46!UBERON:0007846;3.36e-07;3!UBERON:0000043;3.36e-07;3!UBERON:0007845;3.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.54e-13,6;UBERON:0002358,9.54e-13,6;UBERON:0003684,9.54e-13,6;UBERON:0001178,9.54e-13,6;UBERON:0004797,1.23e-10,7;UBERON:0004457,2.65e-10,12;UBERON:0000042,2.65e-10,12;UBERON:0002199,2.77e-10,46;UBERON:0002416,2.77e-10,46;UBERON:0002384,1.80e-09,371;UBERON:0001013,2.17e-09,14;UBERON:0000415,5.81e-09,4;UBERON:0007240,5.81e-09,4;UBERON:0005742,5.81e-09,4;UBERON:0005734,5.81e-09,4;UBERON:0004664,5.81e-09,4;UBERON:0004663,5.81e-09,4;UBERON:0002097,2.34e-08,41;UBERON:0007846,3.46e-07,3;UBERON:0000043,3.46e-07,3;UBERON:0007845,3.46e-07,3 | |||
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| |||
|short_description=p@chr3:112324210..112324254,- | |||
}} |
Revision as of 20:46, 12 September 2013
Short description: | p@chr3:112324210..112324254, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:112324210..112324254, - |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.23e-15 | 76 |
fat cell | 6.78e-12 | 15 |
preadipocyte | 2.17e-11 | 12 |
fibroblast of tunica adventitia of artery | 5.81e-09 | 4 |
fibroblast of the aortic adventitia | 5.81e-09 | 4 |
connective tissue cell | 1.16e-08 | 361 |
skin fibroblast | 2.48e-08 | 23 |
mesenchymal cell | 3.58e-08 | 354 |
multi fate stem cell | 5.12e-08 | 427 |
somatic stem cell | 1.17e-07 | 433 |
adipocyte of omentum tissue | 1.68e-07 | 3 |
stem cell | 3.37e-07 | 441 |
fibrocyte | 3.46e-07 | 3 |
tendon cell | 3.46e-07 | 3 |
omentum preadipocyte | 6.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.54e-13 | 6 |
peritoneum | 9.54e-13 | 6 |
abdominal cavity | 9.54e-13 | 6 |
visceral peritoneum | 9.54e-13 | 6 |
blood vessel layer | 1.23e-10 | 7 |
cavity lining | 2.65e-10 | 12 |
serous membrane | 2.65e-10 | 12 |
integument | 2.77e-10 | 46 |
integumental system | 2.77e-10 | 46 |
connective tissue | 1.80e-09 | 371 |
adipose tissue | 2.17e-09 | 14 |
artery wall | 5.81e-09 | 4 |
tunica adventitia of artery | 5.81e-09 | 4 |
adventitia | 5.81e-09 | 4 |
tunica adventitia of blood vessel | 5.81e-09 | 4 |
aorta tunica adventitia | 5.81e-09 | 4 |
aorta wall | 5.81e-09 | 4 |
skin of body | 2.34e-08 | 41 |
dense regular connective tissue | 3.46e-07 | 3 |
tendon | 3.46e-07 | 3 |
regular connective tissue | 3.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.36e-07 | 5 |
myotonic disease | 3.36e-07 | 5 |
muscle tissue disease | 3.36e-07 | 5 |
myopathy | 3.36e-07 | 5 |
muscular disease | 3.36e-07 | 5 |
myotonic dystrophy | 3.36e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.