FFCP PHASE1:Mm9::chr11:83943259..83943286,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=28|UniProt=|association_with_transcript=57bp_to_uc007kqh.1_5end|description=CAGE_peak_1_at_uc007kqh.1_5end|id=chr11:83943259..83943286,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.04e-14!63;UBERON:0004121!1.05e-11!102;UBERON:0000924!1.05e-11!102;UBERON:0006601!1.05e-11!102;UBERON:0002346!1.53e-11!71;UBERON:0003075!1.53e-11!71;UBERON:0007284!1.53e-11!71;UBERON:0001049!2.27e-11!52;UBERON:0005068!2.27e-11!52;UBERON:0006241!2.27e-11!52;UBERON:0007135!2.27e-11!52;UBERON:0000955!3.95e-11!50;UBERON:0006238!3.95e-11!50;UBERON:0002420!8.45e-11!8;UBERON:0007245!8.45e-11!8;UBERON:0010009!8.45e-11!8;UBERON:0010011!8.45e-11!8;UBERON:0000454!8.45e-11!8;UBERON:0002616!2.52e-10!49;UBERON:0003056!1.82e-09!49;UBERON:0002298!2.08e-09!6;UBERON:0007811!6.60e-09!86;UBERON:0001017!1.21e-08!73;UBERON:0005743!1.21e-08!73;UBERON:0000073!3.29e-08!75;UBERON:0001016!3.29e-08!75;UBERON:0000153!4.02e-08!94;UBERON:0002020!8.15e-08!34;UBERON:0005085!2.24e-07!13;UBERON:0000369!3.26e-07!5;UBERON:0002435!3.26e-07!5;UBERON:0000204!3.26e-07!5;UBERON:0010082!3.26e-07!5;UBERON:0003076!5.56e-07!12;UBERON:0003057!5.56e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.94e-18,2;UBERON:0002298,1.94e-18,2;UBERON:0005290,1.94e-18,2;UBERON:0010096,1.94e-18,2;UBERON:0000993,3.04e-10,1;UBERON:0010371,2.80e-09,73;UBERON:0002346,2.16e-08,64;UBERON:0003075,2.16e-08,64;UBERON:0007284,2.16e-08,64;UBERON:0007023,3.38e-08,51;UBERON:0003076,3.03e-07,12;UBERON:0003057,3.03e-07,12;UBERON:0004121,5.42e-07,95;UBERON:0000924,5.42e-07,95;UBERON:0006601,5.42e-07,95;UBERON:0005085,7.57e-07,13;UBERON:0004733,9.13e-07,6;UBERON:0004732,9.13e-07,6;UBERON:0002028,9.13e-07,6;UBERON:0007277,9.13e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.893811366596314,0.614426133024974,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.748953197024114,1.37250180845588,0.628271760564322,0.173824320192276,0,1.66230435647648,1.62241263067758,0,0,0,86.7020446252273,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,18.1092359517311,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,3.31124095565679,3.53211297973142,2.69586879162067,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,5.44401405809367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.549454872801795,0,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p1@uc007kqh.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt= | |||
|association_with_transcript=57bp_to_uc007kqh.1_5end | |||
|description=CAGE_peak_1_at_uc007kqh.1_5end | |||
|id=chr11:83943259..83943286,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.04e-14!63;UBERON:0004121!1.05e-11!102;UBERON:0000924!1.05e-11!102;UBERON:0006601!1.05e-11!102;UBERON:0002346!1.53e-11!71;UBERON:0003075!1.53e-11!71;UBERON:0007284!1.53e-11!71;UBERON:0001049!2.27e-11!52;UBERON:0005068!2.27e-11!52;UBERON:0006241!2.27e-11!52;UBERON:0007135!2.27e-11!52;UBERON:0000955!3.95e-11!50;UBERON:0006238!3.95e-11!50;UBERON:0002420!8.45e-11!8;UBERON:0007245!8.45e-11!8;UBERON:0010009!8.45e-11!8;UBERON:0010011!8.45e-11!8;UBERON:0000454!8.45e-11!8;UBERON:0002616!2.52e-10!49;UBERON:0003056!1.82e-09!49;UBERON:0002298!2.08e-09!6;UBERON:0007811!6.60e-09!86;UBERON:0001017!1.21e-08!73;UBERON:0005743!1.21e-08!73;UBERON:0000073!3.29e-08!75;UBERON:0001016!3.29e-08!75;UBERON:0000153!4.02e-08!94;UBERON:0002020!8.15e-08!34;UBERON:0005085!2.24e-07!13;UBERON:0000369!3.26e-07!5;UBERON:0002435!3.26e-07!5;UBERON:0000204!3.26e-07!5;UBERON:0010082!3.26e-07!5;UBERON:0003076!5.56e-07!12;UBERON:0003057!5.56e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.94e-18,2;UBERON:0002298,1.94e-18,2;UBERON:0005290,1.94e-18,2;UBERON:0010096,1.94e-18,2;UBERON:0000993,3.04e-10,1;UBERON:0010371,2.80e-09,73;UBERON:0002346,2.16e-08,64;UBERON:0003075,2.16e-08,64;UBERON:0007284,2.16e-08,64;UBERON:0007023,3.38e-08,51;UBERON:0003076,3.03e-07,12;UBERON:0003057,3.03e-07,12;UBERON:0004121,5.42e-07,95;UBERON:0000924,5.42e-07,95;UBERON:0006601,5.42e-07,95;UBERON:0005085,7.57e-07,13;UBERON:0004733,9.13e-07,6;UBERON:0004732,9.13e-07,6;UBERON:0002028,9.13e-07,6;UBERON:0007277,9.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0.893811366596314,0.614426133024974,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.748953197024114,1.37250180845588,0.628271760564322,0.173824320192276,0,1.66230435647648,1.62241263067758,0,0,0,86.7020446252273,0.130120442962704,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,18.1092359517311,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0.983528546038072,3.31124095565679,3.53211297973142,2.69586879162067,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,5.44401405809367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0.549454872801795,0,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p1@uc007kqh.1 | |||
}} |
Revision as of 21:14, 12 September 2013
Short description: | p1@uc007kqh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007kqh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 57bp_to_uc007kqh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.94e-18 | 2 |
brainstem | 1.94e-18 | 2 |
myelencephalon | 1.94e-18 | 2 |
future myelencephalon | 1.94e-18 | 2 |
oviduct | 3.04e-10 | 1 |
ecto-epithelium | 2.80e-09 | 73 |
neurectoderm | 2.16e-08 | 64 |
neural plate | 2.16e-08 | 64 |
presumptive neural plate | 2.16e-08 | 64 |
adult organism | 3.38e-08 | 51 |
posterior neural tube | 3.03e-07 | 12 |
chordal neural plate | 3.03e-07 | 12 |
ectoderm-derived structure | 5.42e-07 | 95 |
ectoderm | 5.42e-07 | 95 |
presumptive ectoderm | 5.42e-07 | 95 |
ectodermal placode | 7.57e-07 | 13 |
segmental subdivision of hindbrain | 9.13e-07 | 6 |
segmental subdivision of nervous system | 9.13e-07 | 6 |
hindbrain | 9.13e-07 | 6 |
presumptive hindbrain | 9.13e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.