FFCP PHASE1:Hg19::chr3:13053554..13053562,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:13053554..13053562,+|id=chr3:13053554..13053562,+|ontology_enrichment_celltype=CL:0000838!1.85e-25!52;CL:0000542!8.31e-25!53;CL:0000051!8.31e-25!53;CL:0000945!3.69e-19!24;CL:0000826!3.69e-19!24;CL:0000037!8.69e-19!172;CL:0000566!8.69e-19!172;CL:0002032!3.64e-18!165;CL:0000837!3.64e-18!165;CL:0000988!7.15e-18!182;CL:0000738!3.14e-14!140;CL:0002031!1.77e-13!124;CL:0002087!1.88e-12!119;CL:0000084!2.66e-07!25;CL:0000827!2.66e-07!25;CL:0000817!2.88e-07!3;CL:0000236!7.55e-07!14|ontology_enrichment_celltype_v019=CL:1001319;1.61e-13;1!CL:1000600;1.61e-13;1!CL:0000946;2.46e-13;1!CL:0000786;2.46e-13;1!CL:0000945;3.35e-12;24!CL:0000236;1.30e-08;13!CL:0001014;4.17e-07;2!CL:0000771;4.17e-07;2!CL:0001016;4.17e-07;2|ontology_enrichment_celltype_v019_2=CL:0000236,1.45e-13,14;CL:1001319,1.61e-13,1;CL:1000600,1.61e-13,1;CL:0000946,2.32e-13,1;CL:0000786,2.32e-13,1;CL:0000980,2.32e-13,1;CL:0000945,3.64e-12,24;CL:0000826,3.64e-12,24;CL:0000838,1.90e-10,52;CL:0000542,3.07e-10,53;CL:0000051,3.07e-10,53;CL:0000785,2.58e-07,2;CL:0000955,2.58e-07,2;CL:0000818,2.58e-07,2;CL:0000954,2.58e-07,2;CL:0000816,2.58e-07,2;CL:0001014,4.42e-07,2;CL:0001016,4.42e-07,2;CL:0000771,5.28e-07,2|ontology_enrichment_development_v019=CL:0000954;2.66e-07;2|ontology_enrichment_disease=DOID:2531!8.45e-18!51;DOID:0060083!8.45e-18!51;DOID:162!1.57e-13!235;DOID:0050686!2.47e-13!137;DOID:14566!6.23e-13!239;DOID:0060058!1.33e-12!10;DOID:1240!2.80e-10!39;DOID:305!9.37e-07!106|ontology_enrichment_disease_v019=DOID:2355;1.82e-13;1!DOID:3111;6.05e-13;1!DOID:3603;6.05e-13;1!DOID:74;2.28e-07;2!DOID:4929;4.17e-07;2|ontology_enrichment_disease_v019_2=DOID:2355,1.82e-13,1;DOID:3111,7.68e-13,1;DOID:3603,7.68e-13,1;DOID:74,2.28e-07,2;DOID:4929,3.93e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004645;1.61e-13;1!UBERON:0001256;1.61e-13;1!UBERON:0001259;1.61e-13;1!UBERON:0004913;6.05e-13;1!UBERON:0003703;6.05e-13;1!UBERON:0001174;6.05e-13;1!UBERON:0004914;6.05e-13;1!UBERON:0001255;2.15e-07;2!UBERON:0001556;2.15e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.61e-13,1;UBERON:0001256,1.61e-13,1;UBERON:0001259,1.61e-13,1;UBERON:0004913,5.38e-13,1;UBERON:0003703,5.38e-13,1;UBERON:0001174,5.38e-13,1;UBERON:0004914,5.38e-13,1;UBERON:0001255,2.15e-07,2;UBERON:0001556,2.15e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.57470412614962,0.629686250509434,0,0,0.154816123316076,0,0,0.369754010166788,0.309868802321207,0.568676929949686,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,1.75996244461323,1.09227722252426,0,0,0,0,1.32208974556972,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.577076851905779,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0.228234679033192,0.783399478865116,0,0,0,0.201799707191048,1.70338495076131,0.343505344755765,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,1.6480387422676,0,0.19924798825107,0,0.251932747854276,0,0.615424027305347,0,0.988551862620595,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0.796554137998498,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0.335643173951685,0.569261198172555,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.547364367646998,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,1.58499458869517,0.114536596165916,0.171594997861965,0.720273989940749,0,0,0.135904206073614,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55627994676295,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:13053554..13053562,+ | |||
|id=chr3:13053554..13053562,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.85e-25!52;CL:0000542!8.31e-25!53;CL:0000051!8.31e-25!53;CL:0000945!3.69e-19!24;CL:0000826!3.69e-19!24;CL:0000037!8.69e-19!172;CL:0000566!8.69e-19!172;CL:0002032!3.64e-18!165;CL:0000837!3.64e-18!165;CL:0000988!7.15e-18!182;CL:0000738!3.14e-14!140;CL:0002031!1.77e-13!124;CL:0002087!1.88e-12!119;CL:0000084!2.66e-07!25;CL:0000827!2.66e-07!25;CL:0000817!2.88e-07!3;CL:0000236!7.55e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.61e-13;1!CL:1000600;1.61e-13;1!CL:0000946;2.46e-13;1!CL:0000786;2.46e-13;1!CL:0000945;3.35e-12;24!CL:0000236;1.30e-08;13!CL:0001014;4.17e-07;2!CL:0000771;4.17e-07;2!CL:0001016;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.45e-13,14;CL:1001319,1.61e-13,1;CL:1000600,1.61e-13,1;CL:0000946,2.32e-13,1;CL:0000786,2.32e-13,1;CL:0000980,2.32e-13,1;CL:0000945,3.64e-12,24;CL:0000826,3.64e-12,24;CL:0000838,1.90e-10,52;CL:0000542,3.07e-10,53;CL:0000051,3.07e-10,53;CL:0000785,2.58e-07,2;CL:0000955,2.58e-07,2;CL:0000818,2.58e-07,2;CL:0000954,2.58e-07,2;CL:0000816,2.58e-07,2;CL:0001014,4.42e-07,2;CL:0001016,4.42e-07,2;CL:0000771,5.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;2.66e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!8.45e-18!51;DOID:0060083!8.45e-18!51;DOID:162!1.57e-13!235;DOID:0050686!2.47e-13!137;DOID:14566!6.23e-13!239;DOID:0060058!1.33e-12!10;DOID:1240!2.80e-10!39;DOID:305!9.37e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.82e-13;1!DOID:3111;6.05e-13;1!DOID:3603;6.05e-13;1!DOID:74;2.28e-07;2!DOID:4929;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.82e-13,1;DOID:3111,7.68e-13,1;DOID:3603,7.68e-13,1;DOID:74,2.28e-07,2;DOID:4929,3.93e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.61e-13;1!UBERON:0001256;1.61e-13;1!UBERON:0001259;1.61e-13;1!UBERON:0004913;6.05e-13;1!UBERON:0003703;6.05e-13;1!UBERON:0001174;6.05e-13;1!UBERON:0004914;6.05e-13;1!UBERON:0001255;2.15e-07;2!UBERON:0001556;2.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.61e-13,1;UBERON:0001256,1.61e-13,1;UBERON:0001259,1.61e-13,1;UBERON:0004913,5.38e-13,1;UBERON:0003703,5.38e-13,1;UBERON:0001174,5.38e-13,1;UBERON:0004914,5.38e-13,1;UBERON:0001255,2.15e-07,2;UBERON:0001556,2.15e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.57470412614962,0.629686250509434,0,0,0.154816123316076,0,0,0.369754010166788,0.309868802321207,0.568676929949686,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,1.75996244461323,1.09227722252426,0,0,0,0,1.32208974556972,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.577076851905779,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0.228234679033192,0.783399478865116,0,0,0,0.201799707191048,1.70338495076131,0.343505344755765,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,1.6480387422676,0,0.19924798825107,0,0.251932747854276,0,0.615424027305347,0,0.988551862620595,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0.796554137998498,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0.335643173951685,0.569261198172555,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.547364367646998,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,1.58499458869517,0.114536596165916,0.171594997861965,0.720273989940749,0,0,0.135904206073614,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55627994676295,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0.35857467866569,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0,0,0,0,0,0.327872630709804,0.628216385000937,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0.327130788511688,0,0,1.47918486351039,0.59996218756479,0.213383459388282,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0.163771917510097,1.6264169483875,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,2.30467975111558,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0.22589216407792,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.399764623699716,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,8.38453666693037,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr3:13053554..13053562,+ | |||
}} |
Revision as of 21:32, 12 September 2013
Short description: | p@chr3:13053554..13053562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:13053554..13053562, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.45e-13 | 14 |
bladder cell | 1.61e-13 | 1 |
lower urinary tract cell | 1.61e-13 | 1 |
antibody secreting cell | 2.32e-13 | 1 |
plasma cell | 2.32e-13 | 1 |
plasmablast | 2.32e-13 | 1 |
lymphocyte of B lineage | 3.64e-12 | 24 |
pro-B cell | 3.64e-12 | 24 |
lymphoid lineage restricted progenitor cell | 1.90e-10 | 52 |
lymphocyte | 3.07e-10 | 53 |
common lymphoid progenitor | 3.07e-10 | 53 |
mature B cell | 2.58e-07 | 2 |
pre-B-II cell | 2.58e-07 | 2 |
transitional stage B cell | 2.58e-07 | 2 |
small pre-B-II cell | 2.58e-07 | 2 |
immature B cell | 2.58e-07 | 2 |
CD1a-positive Langerhans cell | 4.42e-07 | 2 |
immature CD1a-positive Langerhans cell | 4.42e-07 | 2 |
eosinophil | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.61e-13 | 1 |
wall of urinary bladder | 1.61e-13 | 1 |
mucosa of urinary bladder | 1.61e-13 | 1 |
hepatopancreatic ampulla | 5.38e-13 | 1 |
extrahepatic bile duct | 5.38e-13 | 1 |
common bile duct | 5.38e-13 | 1 |
duodenal papilla | 5.38e-13 | 1 |
urinary bladder | 2.15e-07 | 2 |
lower urinary tract | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.82e-13 | 1 |
cystadenocarcinoma | 7.68e-13 | 1 |
mucinous cystadenocarcinoma | 7.68e-13 | 1 |
hematopoietic system disease | 2.28e-07 | 2 |
tubular adenocarcinoma | 3.93e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.