FFCP PHASE1:Hg19::chr3:13114871..13114882,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9922|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29112|TSSclassifier=W|UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90|association_with_transcript=-254bp_to_ENST00000429247,ENST00000435445,NM_001134382,uc011auw.1_5end|description=CAGE_peak_15_at_IQSEC1_5end|id=chr3:13114871..13114882,-|ontology_enrichment_celltype=CL:0000838!3.18e-26!52;CL:0000542!1.51e-25!53;CL:0000051!1.51e-25!53;CL:0000945!3.56e-24!24;CL:0000826!3.56e-24!24;CL:0000236!2.31e-19!14;CL:0002087!1.97e-13!119;CL:0000738!3.05e-13!140;CL:0000080!3.23e-10!6;CL:0002031!5.99e-10!124;CL:0000988!2.29e-09!182;CL:0000037!1.06e-08!172;CL:0000566!1.06e-08!172;CL:0000623!3.37e-07!3;CL:0000825!3.37e-07!3;CL:0002032!5.80e-07!165;CL:0000837!5.80e-07!165|ontology_enrichment_celltype_v019=CL:0000236;2.10e-35;13!CL:0000945;1.49e-24;24!CL:0000623;1.23e-13;3!CL:0000542;2.19e-13;53!CL:0000946;7.43e-11;1!CL:0002127;7.43e-11;1!CL:0000911;7.43e-11;1!CL:0000814;7.43e-11;1!CL:0000786;7.43e-11;1|ontology_enrichment_celltype_v019_2=CL:0000236,6.97e-43,14;CL:0000945,1.16e-24,24;CL:0000826,1.16e-24,24;CL:0000838,1.21e-20,52;CL:0000542,3.20e-20,53;CL:0000051,3.20e-20,53;CL:0000623,1.32e-13,3;CL:0000825,1.32e-13,3;CL:0002127,3.41e-11,1;CL:0000914,3.41e-11,1;CL:0000911,3.41e-11,1;CL:0000814,3.41e-11,1;CL:0002042,3.41e-11,1;CL:0002039,3.41e-11,1;CL:0002040,3.41e-11,1;CL:0002041,3.41e-11,1;CL:0000946,1.21e-10,1;CL:0000786,1.21e-10,1;CL:0000980,1.21e-10,1;CL:0000738,1.00e-09,136;CL:0002087,2.55e-08,115;CL:0002031,6.62e-08,120;CL:0000037,1.76e-07,168;CL:0000988,5.38e-07,177|ontology_enrichment_development_v019=UBERON:0006215;1.23e-13;3!CL:0000051;2.19e-13;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.47e-27!115;UBERON:0001049!1.61e-23!57;UBERON:0005068!1.61e-23!57;UBERON:0006241!1.61e-23!57;UBERON:0007135!1.61e-23!57;UBERON:0002616!7.06e-21!59;UBERON:0000955!1.31e-17!69;UBERON:0006238!1.31e-17!69;UBERON:0002780!3.29e-16!41;UBERON:0001890!3.29e-16!41;UBERON:0006240!3.29e-16!41;UBERON:0001017!1.10e-15!82;UBERON:0003080!1.11e-15!42;UBERON:0005743!1.20e-15!86;UBERON:0003075!9.56e-15!86;UBERON:0007284!9.56e-15!86;UBERON:0000073!2.22e-14!94;UBERON:0001016!2.22e-14!94;UBERON:0002346!1.11e-13!90;UBERON:0002020!3.17e-13!34;UBERON:0003528!3.17e-13!34;UBERON:0001893!3.28e-13!34;UBERON:0001869!1.54e-12!32;UBERON:0002791!5.42e-12!33;UBERON:0002619!3.63e-11!22;UBERON:0001950!8.66e-11!20;UBERON:0003056!5.38e-10!61;UBERON:0004733!8.01e-10!12;UBERON:0002028!8.01e-10!12;UBERON:0007277!8.01e-10!12;UBERON:0000153!1.13e-09!129;UBERON:0007811!1.13e-09!129;UBERON:0000956!1.72e-09!25;UBERON:0000203!1.72e-09!25;UBERON:0003076!2.88e-09!15;UBERON:0003057!2.88e-09!15;UBERON:0004732!6.24e-09!13;UBERON:0000033!2.30e-08!123;UBERON:0002680!5.77e-08!9;UBERON:0001895!5.77e-08!9;UBERON:0010092!5.77e-08!9;UBERON:0000200!8.32e-08!6;UBERON:0000988!4.02e-07!3|ontology_enrichment_uberon_v019=UBERON:0004733;1.16e-19;12!UBERON:0002028;1.16e-19;12!UBERON:0004732;3.78e-18;13!UBERON:0002680;4.11e-17;9!UBERON:0001895;4.11e-17;9!UBERON:0002298;7.72e-15;6!UBERON:0000988;1.23e-13;3!UBERON:0002037;2.95e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0004733,8.83e-20,12;UBERON:0002028,8.83e-20,12;UBERON:0007277,8.83e-20,12;UBERON:0004732,2.95e-18,13;UBERON:0002680,3.21e-17,9;UBERON:0001895,3.21e-17,9;UBERON:0010092,3.21e-17,9;UBERON:0003076,8.17e-16,15;UBERON:0003057,8.17e-16,15;UBERON:0002298,5.83e-15,6;UBERON:0000988,9.00e-14,3;UBERON:0000073,7.08e-08,53;UBERON:0002616,7.08e-08,53;UBERON:0001049,2.01e-07,56;UBERON:0005068,2.01e-07,56;UBERON:0006241,2.01e-07,56;UBERON:0007135,2.01e-07,56;UBERON:0002037,2.87e-07,6;UBERON:0006215,2.87e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,1.15148819429164,0.464448369948228,0,0,0,0.309868802321207,0.284338464974843,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,1.77901850772711,0.853460445133014,1.20118796110804,0.574752439954483,0.661044872784862,1.90810750907073,2.27685187643779,2.93618594685469,1.14681968437569,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9922 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29112 | |||
|TSSclassifier=W | |||
|UniProt=C9JMG9,E9PG60,B4DGC5,Q6DN90 | |||
|association_with_transcript=-254bp_to_ENST00000429247,ENST00000435445,NM_001134382,uc011auw.1_5end | |||
|description=CAGE_peak_15_at_IQSEC1_5end | |||
|id=chr3:13114871..13114882,- | |||
|ontology_enrichment_celltype=CL:0000838!3.18e-26!52;CL:0000542!1.51e-25!53;CL:0000051!1.51e-25!53;CL:0000945!3.56e-24!24;CL:0000826!3.56e-24!24;CL:0000236!2.31e-19!14;CL:0002087!1.97e-13!119;CL:0000738!3.05e-13!140;CL:0000080!3.23e-10!6;CL:0002031!5.99e-10!124;CL:0000988!2.29e-09!182;CL:0000037!1.06e-08!172;CL:0000566!1.06e-08!172;CL:0000623!3.37e-07!3;CL:0000825!3.37e-07!3;CL:0002032!5.80e-07!165;CL:0000837!5.80e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.10e-35;13!CL:0000945;1.49e-24;24!CL:0000623;1.23e-13;3!CL:0000542;2.19e-13;53!CL:0000946;7.43e-11;1!CL:0002127;7.43e-11;1!CL:0000911;7.43e-11;1!CL:0000814;7.43e-11;1!CL:0000786;7.43e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.97e-43,14;CL:0000945,1.16e-24,24;CL:0000826,1.16e-24,24;CL:0000838,1.21e-20,52;CL:0000542,3.20e-20,53;CL:0000051,3.20e-20,53;CL:0000623,1.32e-13,3;CL:0000825,1.32e-13,3;CL:0002127,3.41e-11,1;CL:0000914,3.41e-11,1;CL:0000911,3.41e-11,1;CL:0000814,3.41e-11,1;CL:0002042,3.41e-11,1;CL:0002039,3.41e-11,1;CL:0002040,3.41e-11,1;CL:0002041,3.41e-11,1;CL:0000946,1.21e-10,1;CL:0000786,1.21e-10,1;CL:0000980,1.21e-10,1;CL:0000738,1.00e-09,136;CL:0002087,2.55e-08,115;CL:0002031,6.62e-08,120;CL:0000037,1.76e-07,168;CL:0000988,5.38e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.23e-13;3!CL:0000051;2.19e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.47e-27!115;UBERON:0001049!1.61e-23!57;UBERON:0005068!1.61e-23!57;UBERON:0006241!1.61e-23!57;UBERON:0007135!1.61e-23!57;UBERON:0002616!7.06e-21!59;UBERON:0000955!1.31e-17!69;UBERON:0006238!1.31e-17!69;UBERON:0002780!3.29e-16!41;UBERON:0001890!3.29e-16!41;UBERON:0006240!3.29e-16!41;UBERON:0001017!1.10e-15!82;UBERON:0003080!1.11e-15!42;UBERON:0005743!1.20e-15!86;UBERON:0003075!9.56e-15!86;UBERON:0007284!9.56e-15!86;UBERON:0000073!2.22e-14!94;UBERON:0001016!2.22e-14!94;UBERON:0002346!1.11e-13!90;UBERON:0002020!3.17e-13!34;UBERON:0003528!3.17e-13!34;UBERON:0001893!3.28e-13!34;UBERON:0001869!1.54e-12!32;UBERON:0002791!5.42e-12!33;UBERON:0002619!3.63e-11!22;UBERON:0001950!8.66e-11!20;UBERON:0003056!5.38e-10!61;UBERON:0004733!8.01e-10!12;UBERON:0002028!8.01e-10!12;UBERON:0007277!8.01e-10!12;UBERON:0000153!1.13e-09!129;UBERON:0007811!1.13e-09!129;UBERON:0000956!1.72e-09!25;UBERON:0000203!1.72e-09!25;UBERON:0003076!2.88e-09!15;UBERON:0003057!2.88e-09!15;UBERON:0004732!6.24e-09!13;UBERON:0000033!2.30e-08!123;UBERON:0002680!5.77e-08!9;UBERON:0001895!5.77e-08!9;UBERON:0010092!5.77e-08!9;UBERON:0000200!8.32e-08!6;UBERON:0000988!4.02e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;1.16e-19;12!UBERON:0002028;1.16e-19;12!UBERON:0004732;3.78e-18;13!UBERON:0002680;4.11e-17;9!UBERON:0001895;4.11e-17;9!UBERON:0002298;7.72e-15;6!UBERON:0000988;1.23e-13;3!UBERON:0002037;2.95e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,8.83e-20,12;UBERON:0002028,8.83e-20,12;UBERON:0007277,8.83e-20,12;UBERON:0004732,2.95e-18,13;UBERON:0002680,3.21e-17,9;UBERON:0001895,3.21e-17,9;UBERON:0010092,3.21e-17,9;UBERON:0003076,8.17e-16,15;UBERON:0003057,8.17e-16,15;UBERON:0002298,5.83e-15,6;UBERON:0000988,9.00e-14,3;UBERON:0000073,7.08e-08,53;UBERON:0002616,7.08e-08,53;UBERON:0001049,2.01e-07,56;UBERON:0005068,2.01e-07,56;UBERON:0006241,2.01e-07,56;UBERON:0007135,2.01e-07,56;UBERON:0002037,2.87e-07,6;UBERON:0006215,2.87e-07,6 | |||
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|short_description=p15@IQSEC1 | |||
}} |
Revision as of 21:33, 12 September 2013
Short description: | p15@IQSEC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_IQSEC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -254bp_to_ENST00000429247, ENST00000435445, NM_001134382, uc011auw.1_5end |
EntrezGene: | IQSEC1 |
HGNC: | 29112 |
UniProt: | C9JMG9E9PG60B4DGC5Q6DN90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.97e-43 | 14 |
lymphocyte of B lineage | 1.16e-24 | 24 |
pro-B cell | 1.16e-24 | 24 |
lymphoid lineage restricted progenitor cell | 1.21e-20 | 52 |
lymphocyte | 3.20e-20 | 53 |
common lymphoid progenitor | 3.20e-20 | 53 |
natural killer cell | 1.32e-13 | 3 |
pro-NK cell | 1.32e-13 | 3 |
innate effector T cell | 3.41e-11 | 1 |
immature NK T cell | 3.41e-11 | 1 |
effector T cell | 3.41e-11 | 1 |
mature NK T cell | 3.41e-11 | 1 |
immature NK T cell stage IV | 3.41e-11 | 1 |
immature NK T cell stage I | 3.41e-11 | 1 |
immature NK T cell stage II | 3.41e-11 | 1 |
immature NK T cell stage III | 3.41e-11 | 1 |
antibody secreting cell | 1.21e-10 | 1 |
plasma cell | 1.21e-10 | 1 |
plasmablast | 1.21e-10 | 1 |
leukocyte | 1.00e-09 | 136 |
nongranular leukocyte | 2.55e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 6.62e-08 | 120 |
hematopoietic stem cell | 1.76e-07 | 168 |
hematopoietic cell | 5.38e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 8.83e-20 | 12 |
hindbrain | 8.83e-20 | 12 |
presumptive hindbrain | 8.83e-20 | 12 |
segmental subdivision of nervous system | 2.95e-18 | 13 |
regional part of metencephalon | 3.21e-17 | 9 |
metencephalon | 3.21e-17 | 9 |
future metencephalon | 3.21e-17 | 9 |
posterior neural tube | 8.17e-16 | 15 |
chordal neural plate | 8.17e-16 | 15 |
brainstem | 5.83e-15 | 6 |
pons | 9.00e-14 | 3 |
regional part of nervous system | 7.08e-08 | 53 |
regional part of brain | 7.08e-08 | 53 |
neural tube | 2.01e-07 | 56 |
neural rod | 2.01e-07 | 56 |
future spinal cord | 2.01e-07 | 56 |
neural keel | 2.01e-07 | 56 |
cerebellum | 2.87e-07 | 6 |
rhombic lip | 2.87e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.