FFCP PHASE1:Hg19::chr3:141105560..141105572,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C91|description=CAGE_peak_at_chr3:141105560..141105572,-|id=chr3:141105560..141105572,-|ontology_enrichment_celltype=CL:0002504!6.29e-10!3;CL:1000279!6.29e-10!3;CL:1000280!6.29e-10!3;CL:0000569!2.54e-08!4;CL:0000011!2.54e-08!4;CL:1000306!7.81e-08!4;CL:0002547!7.81e-08!4;CL:0002195!2.40e-07!2;CL:0002571!2.40e-07!2|ontology_enrichment_celltype_v019=CL:0000569;9.87e-34;4!CL:0002600;9.07e-18;2!CL:1000306;1.12e-09;4!CL:0002547;1.12e-09;4!CL:0002494;3.01e-09;16!CL:0002595;6.55e-08;5|ontology_enrichment_celltype_v019_2=CL:0000569,8.36e-34,4;CL:0000011,8.36e-34,4;CL:0002600,1.07e-17,2;CL:1000306,1.12e-09,4;CL:0002547,1.12e-09,4;CL:0002494,2.89e-09,16;CL:0002595,7.49e-08,5|ontology_enrichment_development_v019=CL:0000011;9.87e-34;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;5.05e-34;1!DOID:0070004;5.05e-34;1|ontology_enrichment_disease_v019_2=DOID:4960,2.58e-34,1;DOID:0070004,2.58e-34,1|ontology_enrichment_uberon=UBERON:0001049!1.48e-11!57;UBERON:0005068!1.48e-11!57;UBERON:0006241!1.48e-11!57;UBERON:0007135!1.48e-11!57;UBERON:0002616!1.17e-09!59;UBERON:0001893!2.53e-09!34;UBERON:0002780!1.07e-08!41;UBERON:0001890!1.07e-08!41;UBERON:0006240!1.07e-08!41;UBERON:0001869!1.97e-08!32;UBERON:0003080!1.97e-08!42;UBERON:0000200!2.07e-08!6;UBERON:0002791!4.95e-08!33;UBERON:0000073!7.70e-08!94;UBERON:0001016!7.70e-08!94;UBERON:0000415!7.81e-08!4;UBERON:0007240!7.81e-08!4;UBERON:0005742!7.81e-08!4;UBERON:0005734!7.81e-08!4;UBERON:0004664!7.81e-08!4;UBERON:0004663!7.81e-08!4;UBERON:0002020!8.61e-08!34;UBERON:0003528!8.61e-08!34;UBERON:0000025!1.03e-07!194;UBERON:0001017!1.27e-07!82;UBERON:0000955!1.40e-07!69;UBERON:0006238!1.40e-07!69;UBERON:0000483!1.65e-07!309;UBERON:0000119!2.40e-07!312;UBERON:0003075!3.21e-07!86;UBERON:0007284!3.21e-07!86;UBERON:0004111!4.20e-07!241;UBERON:0005743!4.32e-07!86;UBERON:0002619!6.75e-07!22;UBERON:0000475!9.43e-07!365|ontology_enrichment_uberon_v019=UBERON:0004797;1.12e-09;4!UBERON:0000415;1.12e-09;4!UBERON:0007240;1.12e-09;4!UBERON:0005742;1.12e-09;4!UBERON:0005734;1.12e-09;4!UBERON:0004664;1.12e-09;4!UBERON:0004663;1.12e-09;4!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0000948;5.57e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.12e-09,4;UBERON:0007240,1.12e-09,4;UBERON:0005742,1.12e-09,4;UBERON:0005734,1.12e-09,4;UBERON:0004664,1.12e-09,4;UBERON:0004663,1.12e-09,4;UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5;UBERON:0004872,6.53e-07,83|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,10.4603252842443,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0.61246251376468,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529536760149002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,1.37304041038154,0.756154618816195,0,1.33069634990671,0.318593534327405,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41477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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr3:141105560..141105572,- | |||
|id=chr3:141105560..141105572,- | |||
|ontology_enrichment_celltype=CL:0002504!6.29e-10!3;CL:1000279!6.29e-10!3;CL:1000280!6.29e-10!3;CL:0000569!2.54e-08!4;CL:0000011!2.54e-08!4;CL:1000306!7.81e-08!4;CL:0002547!7.81e-08!4;CL:0002195!2.40e-07!2;CL:0002571!2.40e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000569;9.87e-34;4!CL:0002600;9.07e-18;2!CL:1000306;1.12e-09;4!CL:0002547;1.12e-09;4!CL:0002494;3.01e-09;16!CL:0002595;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,8.36e-34,4;CL:0000011,8.36e-34,4;CL:0002600,1.07e-17,2;CL:1000306,1.12e-09,4;CL:0002547,1.12e-09,4;CL:0002494,2.89e-09,16;CL:0002595,7.49e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000011;9.87e-34;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;5.05e-34;1!DOID:0070004;5.05e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.58e-34,1;DOID:0070004,2.58e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-11!57;UBERON:0005068!1.48e-11!57;UBERON:0006241!1.48e-11!57;UBERON:0007135!1.48e-11!57;UBERON:0002616!1.17e-09!59;UBERON:0001893!2.53e-09!34;UBERON:0002780!1.07e-08!41;UBERON:0001890!1.07e-08!41;UBERON:0006240!1.07e-08!41;UBERON:0001869!1.97e-08!32;UBERON:0003080!1.97e-08!42;UBERON:0000200!2.07e-08!6;UBERON:0002791!4.95e-08!33;UBERON:0000073!7.70e-08!94;UBERON:0001016!7.70e-08!94;UBERON:0000415!7.81e-08!4;UBERON:0007240!7.81e-08!4;UBERON:0005742!7.81e-08!4;UBERON:0005734!7.81e-08!4;UBERON:0004664!7.81e-08!4;UBERON:0004663!7.81e-08!4;UBERON:0002020!8.61e-08!34;UBERON:0003528!8.61e-08!34;UBERON:0000025!1.03e-07!194;UBERON:0001017!1.27e-07!82;UBERON:0000955!1.40e-07!69;UBERON:0006238!1.40e-07!69;UBERON:0000483!1.65e-07!309;UBERON:0000119!2.40e-07!312;UBERON:0003075!3.21e-07!86;UBERON:0007284!3.21e-07!86;UBERON:0004111!4.20e-07!241;UBERON:0005743!4.32e-07!86;UBERON:0002619!6.75e-07!22;UBERON:0000475!9.43e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.12e-09;4!UBERON:0000415;1.12e-09;4!UBERON:0007240;1.12e-09;4!UBERON:0005742;1.12e-09;4!UBERON:0005734;1.12e-09;4!UBERON:0004664;1.12e-09;4!UBERON:0004663;1.12e-09;4!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0000948;5.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.12e-09,4;UBERON:0007240,1.12e-09,4;UBERON:0005742,1.12e-09,4;UBERON:0005734,1.12e-09,4;UBERON:0004664,1.12e-09,4;UBERON:0004663,1.12e-09,4;UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5;UBERON:0004872,6.53e-07,83 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,10.4603252842443,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0.61246251376468,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529536760149002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,1.37304041038154,0.756154618816195,0,1.33069634990671,0.318593534327405,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:141105560..141105572,- | |||
}} |
Revision as of 21:49, 12 September 2013
Short description: | p@chr3:141105560..141105572, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:141105560..141105572, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 8.36e-34 | 4 |
migratory trunk neural crest cell | 8.36e-34 | 4 |
smooth muscle cell of trachea | 1.07e-17 | 2 |
fibroblast of tunica adventitia of artery | 1.12e-09 | 4 |
fibroblast of the aortic adventitia | 1.12e-09 | 4 |
cardiocyte | 2.89e-09 | 16 |
smooth muscle cell of the subclavian artery | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.12e-09 | 4 |
tunica adventitia of artery | 1.12e-09 | 4 |
adventitia | 1.12e-09 | 4 |
tunica adventitia of blood vessel | 1.12e-09 | 4 |
aorta tunica adventitia | 1.12e-09 | 4 |
aorta wall | 1.12e-09 | 4 |
thoracic segment blood vessel | 7.49e-08 | 5 |
subclavian artery | 7.49e-08 | 5 |
splanchnic layer of lateral plate mesoderm | 6.53e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.58e-34 | 1 |
myeloma | 2.58e-34 | 1 |
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