FFCP PHASE1:Hg19::chr3:178916550..178916554,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5290|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=8975|TSSclassifier=W|UniProt=P42336|association_with_transcript=13bp_to_BC113601,BC113603_5end|description=CAGE_peak_7_at_PIK3CA_5end|id=chr3:178916550..178916554,+|ontology_enrichment_celltype=CL:0000738!2.38e-08!140;CL:0002031!1.19e-07!124;CL:0002087!6.43e-07!119|ontology_enrichment_celltype_v019=CL:0000453;1.16e-09;5!CL:0000135;2.91e-07;3!CL:0000388;2.91e-07;3|ontology_enrichment_celltype_v019_2=CL:0000453,1.64e-09,5;CL:0000135,2.74e-07,3;CL:0000388,2.74e-07,3|ontology_enrichment_development_v019=UBERON:0006241;2.91e-07;3!UBERON:0003057;2.91e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002021;1.35e-09;5!UBERON:0002240;2.91e-07;3!UBERON:0007846;2.91e-07;3!UBERON:0005174;2.91e-07;3!UBERON:0000043;2.91e-07;3!UBERON:0007845;2.91e-07;3!UBERON:0001137;2.91e-07;3!UBERON:0002619;3.68e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.12e-10,5;UBERON:0002619,2.28e-07,22;UBERON:0002240,2.57e-07,3;UBERON:0005174,2.57e-07,3;UBERON:0001137,2.57e-07,3;UBERON:0007846,2.74e-07,3;UBERON:0000043,2.74e-07,3;UBERON:0007845,2.74e-07,3;UBERON:0001049,6.42e-07,56;UBERON:0005068,6.42e-07,56;UBERON:0006241,6.42e-07,56;UBERON:0007135,6.42e-07,56|phase1_expression=0.181678379270557,1.71280419112787,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.618831764800233,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.251085279189606,0.305653622991805,0.0821005894499457,0.236132343941038,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0.377875943688809,0.242584061187816,0.929716147622738,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0.545812300115692,0.674170453335254,0.612167784741805,0,0.639337125799041,1.31940520074686,0.797854630486527,0,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,0.633765858935825,0.212604299965044,0,0.336985893439485,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,2.93618594685469,0.382273228125229,0,0,0.526768169550154,0,1.17903228824749,0.616804496998528,0.167186495390678,1.30368906653436,0,0,0.668462741311041,0.589211814949674,0.221533894583621,0.270803863765016,0.25618263945135,0.520237390239513,0,0,0.289803085735052,0.593146252648242,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.868946423296794,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0.665188192387692,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,1.15235184896,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.0920498986422993,0.161646056818812,0,0.503760491138201,0,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0,0.297262324577456,0,0,0.425325291727159,0,0,0,1.47798971368783,0.616339038092582,0.414656231081544,0.576479813667846,1.64115163454294,0,0,0,0,0,0,0.571652865261156,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.699810938274399,1.2162378064119,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.336255431980582,0.197030760201927,1.50939302401662,0.385029108839245,0,0,0.773288812777695,0.335032530668698,1.27587750330633,3.74503511973591,0,0.828831026872071,0.24538298343828,0,0.271265023699736,0.207970861530807,0.892144943985809,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.355123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085281,0,0.0717222053926763,0.665320713092027,0.162806537221949,0,0,0,0,0.122241444182866,0.406896178315738,0,0.805095174364105,0|short_description=p7@PIK3CA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5290 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8975 | |||
|TSSclassifier=W | |||
|UniProt=P42336 | |||
|association_with_transcript=13bp_to_BC113601,BC113603_5end | |||
|description=CAGE_peak_7_at_PIK3CA_5end | |||
|id=chr3:178916550..178916554,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.38e-08!140;CL:0002031!1.19e-07!124;CL:0002087!6.43e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.16e-09;5!CL:0000135;2.91e-07;3!CL:0000388;2.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.64e-09,5;CL:0000135,2.74e-07,3;CL:0000388,2.74e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.91e-07;3!UBERON:0003057;2.91e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.35e-09;5!UBERON:0002240;2.91e-07;3!UBERON:0007846;2.91e-07;3!UBERON:0005174;2.91e-07;3!UBERON:0000043;2.91e-07;3!UBERON:0007845;2.91e-07;3!UBERON:0001137;2.91e-07;3!UBERON:0002619;3.68e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.12e-10,5;UBERON:0002619,2.28e-07,22;UBERON:0002240,2.57e-07,3;UBERON:0005174,2.57e-07,3;UBERON:0001137,2.57e-07,3;UBERON:0007846,2.74e-07,3;UBERON:0000043,2.74e-07,3;UBERON:0007845,2.74e-07,3;UBERON:0001049,6.42e-07,56;UBERON:0005068,6.42e-07,56;UBERON:0006241,6.42e-07,56;UBERON:0007135,6.42e-07,56 | |||
|phase1_expression=0.181678379270557,1.71280419112787,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.618831764800233,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.251085279189606,0.305653622991805,0.0821005894499457,0.236132343941038,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0.377875943688809,0.242584061187816,0.929716147622738,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.376484679085209,0.545812300115692,0.674170453335254,0.612167784741805,0,0.639337125799041,1.31940520074686,0.797854630486527,0,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,0.633765858935825,0.212604299965044,0,0.336985893439485,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,2.93618594685469,0.382273228125229,0,0,0.526768169550154,0,1.17903228824749,0.616804496998528,0.167186495390678,1.30368906653436,0,0,0.668462741311041,0.589211814949674,0.221533894583621,0.270803863765016,0.25618263945135,0.520237390239513,0,0,0.289803085735052,0.593146252648242,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.868946423296794,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0.665188192387692,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,1.15235184896,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.0920498986422993,0.161646056818812,0,0.503760491138201,0,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0,0.246217006087397,0,0.297262324577456,0,0,0.425325291727159,0,0,0,1.47798971368783,0.616339038092582,0.414656231081544,0.576479813667846,1.64115163454294,0,0,0,0,0,0,0.571652865261156,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.699810938274399,1.2162378064119,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.336255431980582,0.197030760201927,1.50939302401662,0.385029108839245,0,0,0.773288812777695,0.335032530668698,1.27587750330633,3.74503511973591,0,0.828831026872071,0.24538298343828,0,0.271265023699736,0.207970861530807,0.892144943985809,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0,0,1.00253235151642,0.276242966807689,0,0.182091168006717,0.262248829918848,0,0.231046011313244,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0.551346289938122,0.214840489736547,0.290033387828457,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0.822724546172388,0,0.540031437238115,0.79312517629427,0,0,0,0.371606350251437,0,0.142283686696828,0.318852545457645,0.199579371432817,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.47748896947538,0.890894042497916,0,0,0.562677665642051,0.111308705022906,0,0.211125408127993,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,1.77148277162768,0,3.05163472634166,0.331737779793674,0.295547618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| |||
|short_description=p7@PIK3CA | |||
}} |
Revision as of 22:50, 12 September 2013
Short description: | p7@PIK3CA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_PIK3CA_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_BC113601, BC113603_5end |
EntrezGene: | PIK3CA |
HGNC: | 8975 |
UniProt: | P42336 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.64e-09 | 5 |
fibrocyte | 2.74e-07 | 3 |
tendon cell | 2.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.12e-10 | 5 |
regional part of cerebral cortex | 2.28e-07 | 22 |
spinal cord | 2.57e-07 | 3 |
dorsal region element | 2.57e-07 | 3 |
dorsum | 2.57e-07 | 3 |
dense regular connective tissue | 2.74e-07 | 3 |
tendon | 2.74e-07 | 3 |
regular connective tissue | 2.74e-07 | 3 |
neural tube | 6.42e-07 | 56 |
neural rod | 6.42e-07 | 56 |
future spinal cord | 6.42e-07 | 56 |
neural keel | 6.42e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.