FFCP PHASE1:Hg19::chr3:238332..238343,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10752|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1939|TSSclassifier=S|UniProt=O00533|association_with_transcript=53bp_to_ENST00000256509,NM_001253387,NM_006614_5end|coexpression_cluster_id=C10|description=CAGE_peak_9_at_CHL1_5end|id=chr3:238332..238343,+|ontology_enrichment_celltype=CL:0000047!7.07e-09!8|ontology_enrichment_celltype_v019=CL:0000047;4.44e-20;2!CL:0000540;2.87e-07;6!CL:0000404;2.87e-07;6|ontology_enrichment_celltype_v019_2=CL:0000047,2.57e-19,8;CL:0000540,2.96e-07,6;CL:0000031,2.96e-07,6;CL:0000404,2.96e-07,6|ontology_enrichment_development_v019=UBERON:0006601;5.11e-08;82!CL:0000031;2.87e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;9.96e-11;1!DOID:1357;9.96e-11;1|ontology_enrichment_disease_v019_2=DOID:0050619,1.61e-10,1;DOID:1357,1.61e-10,1|ontology_enrichment_uberon=UBERON:0001017!8.50e-54!82;UBERON:0001893!1.86e-53!34;UBERON:0001049!2.61e-53!57;UBERON:0005068!2.61e-53!57;UBERON:0006241!2.61e-53!57;UBERON:0007135!2.61e-53!57;UBERON:0005743!2.71e-53!86;UBERON:0002791!5.27e-51!33;UBERON:0001869!2.19e-49!32;UBERON:0002020!2.63e-49!34;UBERON:0003528!2.63e-49!34;UBERON:0000073!3.81e-47!94;UBERON:0001016!3.81e-47!94;UBERON:0002780!2.46e-46!41;UBERON:0001890!2.46e-46!41;UBERON:0006240!2.46e-46!41;UBERON:0002616!3.08e-45!59;UBERON:0003080!4.68e-45!42;UBERON:0002619!2.39e-43!22;UBERON:0001950!3.96e-43!20;UBERON:0000955!7.18e-42!69;UBERON:0006238!7.18e-42!69;UBERON:0007023!1.69e-41!115;UBERON:0003075!2.04e-40!86;UBERON:0007284!2.04e-40!86;UBERON:0002346!3.96e-38!90;UBERON:0000956!1.18e-37!25;UBERON:0000203!1.18e-37!25;UBERON:0003056!5.34e-33!61;UBERON:0000033!6.84e-25!123;UBERON:0004121!1.06e-24!169;UBERON:0000924!7.67e-24!173;UBERON:0006601!7.67e-24!173;UBERON:0000153!3.10e-23!129;UBERON:0007811!3.10e-23!129;UBERON:0002420!1.92e-17!9;UBERON:0007245!1.92e-17!9;UBERON:0010009!1.92e-17!9;UBERON:0010011!1.92e-17!9;UBERON:0000454!1.92e-17!9;UBERON:0001871!1.64e-16!7;UBERON:0000200!4.18e-16!6;UBERON:0000025!1.84e-15!194;UBERON:0002021!1.52e-13!5;UBERON:0002308!6.94e-13!9;UBERON:0000125!6.94e-13!9;UBERON:0009663!1.33e-12!7;UBERON:0004111!1.62e-12!241;UBERON:0000064!1.81e-12!219;UBERON:0002298!7.01e-11!8;UBERON:0000477!1.17e-10!286;UBERON:0003076!9.78e-10!15;UBERON:0003057!9.78e-10!15;UBERON:0000483!1.38e-09!309;UBERON:0000119!2.23e-09!312;UBERON:0000475!4.34e-09!365;UBERON:0001872!5.13e-09!5;UBERON:0000349!6.18e-09!5;UBERON:0002771!7.97e-09!3;UBERON:0001896!2.03e-08!3;UBERON:0005290!2.03e-08!3;UBERON:0010096!2.03e-08!3;UBERON:0004733!3.95e-07!12;UBERON:0002028!3.95e-07!12;UBERON:0007277!3.95e-07!12;UBERON:0000481!4.22e-07!347|ontology_enrichment_uberon_v019=UBERON:0001950;2.43e-35;20!UBERON:0002619;3.58e-32;22!UBERON:0000956;2.47e-28;25!UBERON:0000203;2.47e-28;25!UBERON:0001869;5.46e-24;32!UBERON:0001893;6.23e-23;34!UBERON:0001871;6.31e-22;6!UBERON:0002791;5.22e-20;32!UBERON:0003528;4.15e-19;34!UBERON:0002020;4.15e-19;34!UBERON:0001017;7.63e-15;75!UBERON:0002780;1.06e-13;41!UBERON:0001890;1.06e-13;41!UBERON:0001016;1.65e-13;83!UBERON:0000955;5.90e-12;68!UBERON:0000073;1.24e-11;53!UBERON:0002616;1.24e-11;53!UBERON:0002022;9.96e-11;1!UBERON:0001764;9.96e-11;1!UBERON:0001825;9.96e-11;1!UBERON:0007190;9.96e-11;1!UBERON:0002021;1.20e-08;5!UBERON:0000200;3.57e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.56e-35,20;UBERON:0001017,2.85e-34,81;UBERON:0002619,2.39e-32,22;UBERON:0001016,1.15e-30,89;UBERON:0000956,1.73e-28,25;UBERON:0000203,1.73e-28,25;UBERON:0001869,2.45e-27,32;UBERON:0001893,1.07e-25,34;UBERON:0002791,3.34e-22,32;UBERON:0001871,3.77e-22,6;UBERON:0002780,3.50e-21,41;UBERON:0001890,3.50e-21,41;UBERON:0003080,3.50e-21,41;UBERON:0006240,3.50e-21,41;UBERON:0003528,7.22e-21,34;UBERON:0002020,7.22e-21,34;UBERON:0000955,8.62e-21,68;UBERON:0006238,8.62e-21,68;UBERON:0000073,1.46e-19,53;UBERON:0002616,1.46e-19,53;UBERON:0001049,1.91e-18,56;UBERON:0005068,1.91e-18,56;UBERON:0006241,1.91e-18,56;UBERON:0007135,1.91e-18,56;UBERON:0004121,6.08e-15,171;UBERON:0000924,6.08e-15,171;UBERON:0006601,6.08e-15,171;UBERON:0011216,5.94e-14,223;UBERON:0003056,6.88e-14,61;UBERON:0003075,3.80e-12,82;UBERON:0007284,3.80e-12,82;UBERON:0002346,1.64e-11,86;UBERON:0002022,7.46e-11,1;UBERON:0007190,1.33e-10,1;UBERON:0001764,1.61e-10,1;UBERON:0001825,1.61e-10,1;UBERON:0010371,3.01e-09,104;UBERON:0002021,1.27e-08,5;UBERON:0000200,3.36e-07,6;UBERON:0010314,6.07e-07,132;UBERON:0007023,9.26e-07,114|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1939 | |||
|TSSclassifier=S | |||
|UniProt=O00533 | |||
|association_with_transcript=53bp_to_ENST00000256509,NM_001253387,NM_006614_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_9_at_CHL1_5end | |||
|id=chr3:238332..238343,+ | |||
|ontology_enrichment_celltype=CL:0000047!7.07e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.44e-20;2!CL:0000540;2.87e-07;6!CL:0000404;2.87e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.57e-19,8;CL:0000540,2.96e-07,6;CL:0000031,2.96e-07,6;CL:0000404,2.96e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.11e-08;82!CL:0000031;2.87e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.96e-11;1!DOID:1357;9.96e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.61e-10,1;DOID:1357,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.50e-54!82;UBERON:0001893!1.86e-53!34;UBERON:0001049!2.61e-53!57;UBERON:0005068!2.61e-53!57;UBERON:0006241!2.61e-53!57;UBERON:0007135!2.61e-53!57;UBERON:0005743!2.71e-53!86;UBERON:0002791!5.27e-51!33;UBERON:0001869!2.19e-49!32;UBERON:0002020!2.63e-49!34;UBERON:0003528!2.63e-49!34;UBERON:0000073!3.81e-47!94;UBERON:0001016!3.81e-47!94;UBERON:0002780!2.46e-46!41;UBERON:0001890!2.46e-46!41;UBERON:0006240!2.46e-46!41;UBERON:0002616!3.08e-45!59;UBERON:0003080!4.68e-45!42;UBERON:0002619!2.39e-43!22;UBERON:0001950!3.96e-43!20;UBERON:0000955!7.18e-42!69;UBERON:0006238!7.18e-42!69;UBERON:0007023!1.69e-41!115;UBERON:0003075!2.04e-40!86;UBERON:0007284!2.04e-40!86;UBERON:0002346!3.96e-38!90;UBERON:0000956!1.18e-37!25;UBERON:0000203!1.18e-37!25;UBERON:0003056!5.34e-33!61;UBERON:0000033!6.84e-25!123;UBERON:0004121!1.06e-24!169;UBERON:0000924!7.67e-24!173;UBERON:0006601!7.67e-24!173;UBERON:0000153!3.10e-23!129;UBERON:0007811!3.10e-23!129;UBERON:0002420!1.92e-17!9;UBERON:0007245!1.92e-17!9;UBERON:0010009!1.92e-17!9;UBERON:0010011!1.92e-17!9;UBERON:0000454!1.92e-17!9;UBERON:0001871!1.64e-16!7;UBERON:0000200!4.18e-16!6;UBERON:0000025!1.84e-15!194;UBERON:0002021!1.52e-13!5;UBERON:0002308!6.94e-13!9;UBERON:0000125!6.94e-13!9;UBERON:0009663!1.33e-12!7;UBERON:0004111!1.62e-12!241;UBERON:0000064!1.81e-12!219;UBERON:0002298!7.01e-11!8;UBERON:0000477!1.17e-10!286;UBERON:0003076!9.78e-10!15;UBERON:0003057!9.78e-10!15;UBERON:0000483!1.38e-09!309;UBERON:0000119!2.23e-09!312;UBERON:0000475!4.34e-09!365;UBERON:0001872!5.13e-09!5;UBERON:0000349!6.18e-09!5;UBERON:0002771!7.97e-09!3;UBERON:0001896!2.03e-08!3;UBERON:0005290!2.03e-08!3;UBERON:0010096!2.03e-08!3;UBERON:0004733!3.95e-07!12;UBERON:0002028!3.95e-07!12;UBERON:0007277!3.95e-07!12;UBERON:0000481!4.22e-07!347 | |||
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|short_description=p9@CHL1 | |||
}} |
Revision as of 23:42, 12 September 2013
Short description: | p9@CHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CHL1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 53bp_to_ENST00000256509, NM_001253387, NM_006614_5end |
EntrezGene: | CHL1 |
HGNC: | 1939 |
UniProt: | O00533 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.57e-19 | 8 |
neuron | 2.96e-07 | 6 |
neuroblast | 2.96e-07 | 6 |
electrically signaling cell | 2.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.61e-10 | 1 |
maxillary sinus cancer | 1.61e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.