FFCP PHASE1:Mm9::chr13:23636327..23636345,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15077,260423,319148,319149,319150,319151,319154,97114|HGNC=|MCL_coexpression_id=154|UniProt=P84228,B9EI85|association_with_transcript=406bp_to_ENSMUST00000075558,NM_013548,uc007ptz.2_5end|description=CAGE_peak_3_at_Hist1h3e_5end,CAGE_peak_3_at_Hist1h3f_5end,CAGE_peak_3_at_Hist2h3c1_5end,CAGE_peak_3_at_Hist2h3c2-ps_5end,CAGE_peak_4_at_Hist1h3b_5end,CAGE_peak_4_at_Hist1h3c_5end,CAGE_peak_4_at_Hist1h3d_5end,CAGE_peak_4_at_Hist2h3b_5end|id=chr13:23636327..23636345,+|ontology_enrichment_celltype=CL:0000049!9.96e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,9.96e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=191.538021137334,93.5254092473488,74.6198752598839,38.1104906246606,69.1236107325959,277.000798654618,234.780703798503,97.4881091983901,21.8222519335083,28.3218076849612,33.7299397404245,36.6154209788594,64.7138759139958,76.4928521166227,1829.77192165344,3207.81566125701,5455.18352564329,184.860828899927,168.513638901453,548.311430123055,55.9584849194039,636.454997197675,631.319890348807,227.669217635018,340.902191665815,230.841249574238,297.225777349762,249.731158682945,230.878454639494,439.036486041799,554.769737659572,7608.9375293933,5199.14264945237,8954.21497737229,772.389231214908,1246.26113625262,900.386861117048,1800.10454379944,2958.91694971163,1431.83743976834,1236.46258784119,1884.52249300035,1005.97745148055,53.6320444575959,39.7397570380497,37.9941776974681,201.856966841794,231.978766388795,50.308135846194,29.9422044574396,96.1706716566241,133.689884859424,176.003953754565,96.4731648875088,82.0068869907612,96.4722885134801,68.4814921453629,36.097046459421,148.095649349226,139.124627548545,147.68271701694,215.166277863899,216.098635455007,76.9414258275596,115.697364420336,105.151057012023,227.096883772951,239.75222252065,267.00075169433,408.392963453364,381.739804852758,108.547374073445,103.808214247258,476.121736548526,437.151193314176,309.776731087577,29.731287869835,12.896421146604,9.06278546211836,98.1233980712642,69.6220967814337,101.578107258568,18.1468949350898,23.6360296213306,16.8078072554491,124.922520240835,71.3282120803506,76.7965716800238,24.2323818666189,117.740490646372,70.4370707545077,47.3233132339763,3.39985666853875,11.873470216032,14.2950811838487,9.85659151614138,113.759980306719,207.413702577496,381.106068752408,265.358020457266,176.899335239511,75.7126216744475,10.1922095882658,7.11066703153331,874.623805685305,699.779948442222,702.173454125534,108.588869612826,57.2252722860249,16.7739617143252,465.287646386776,375.710400237182,219.545953387768,142.432895322228,78.6668450737865,34.1813128416717,9.39340877390621,12.7247434089522,575.881469319368,183.605374690309,436.382840477738,586.699056293619,72.6927868750676,5.85561594023094,8.3778682725382,121.853015334498,4404.04453146411,3808.18253634615,3129.48555235544,5.99162557619291,11.8950156732843,55.1622605775475,10.7771078519211,5.8814555185976,9.97382613885888,10.5456820994042,176.793135644149,407.308421777445,39.9301958325206,17.2562321826909,477.151664344235,754.998510959525,374.709292124932,409.917104513145,267.315405165567,359.743326559858,322.802441108266,12.6764651662118,641.530346968138,343.038429424424,239.997333359626,327.916815711652,242.179154075496,128.505049446679,132.729477983124,328.605574517332,1391.08432406752,1643.9384306488,1959.8756553314,257.043083716558,305.352930095387,234.26074196078,155.304546543898,172.365467010726,205.020993027326,165.56416866229,151.574471790785,96.9152341647507,56.6085883702373,47.2802296547794,17.5108628619048,20.1755982646959,27.2242142960903,29.3912057085214,12.6173969138476,44.0431740983337,17.5121954981413,141.216602598333,458.996315151823,429.637842941811,250.904947194116,160.338402075557,138.541521315354,159.409074682325,169.881404032935,93.0549094190661,130.44297336734,145.23822459004,92.2180132073438,119.542981351011,133.789452872436,95.5878111620963,639.749829914745,405.582219764537,247.957018480777,326.453078536039,227.11836247329,117.828177415735,70.1925562079256,23.7652338247159,29.3587621063371,29.6153193412321,16.6013471168803,749.301369770978,905.1541724963,941.497664555383,1233.3895380421,1146.79739462274,1251.99531320924,803.535311900114,744.200690897412,626.549144895202,189.774032616108,219.563159124417,89.8668498569934,26.2682033064996,49.3342887185259,11.0962009913574,40.2761954563198,683.874505079679,363.085967512834,596.484231414011,444.033949761846,184.424389443439,84.0294052327629,26.3430424608028,87.0145995466174,129.999772823831,42.5744232315491,23.2685906896348,34.8823663369109,46.8662949804097,25.6345182696763,48.4076058598651,64.4211197654937,47.1851836181093,6.74312477948726,6.32943107597897,377.21430931173,48.2219470960352,262.187330334909,253.785183792815,159.844161117737,129.521088490283,114.741317152433,119.458295992887,165.972387686707,101.120526837314,86.1727355923421,17.3513510867776,47.6918686299783,292.205655617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| ||
|EntrezGene=15077,260423,319148,319149,319150,319151,319154,97114 | |||
|HGNC= | |||
|MCL_coexpression_id=154 | |||
|UniProt=P84228,B9EI85 | |||
|association_with_transcript=406bp_to_ENSMUST00000075558,NM_013548,uc007ptz.2_5end | |||
|description=CAGE_peak_3_at_Hist1h3e_5end,CAGE_peak_3_at_Hist1h3f_5end,CAGE_peak_3_at_Hist2h3c1_5end,CAGE_peak_3_at_Hist2h3c2-ps_5end,CAGE_peak_4_at_Hist1h3b_5end,CAGE_peak_4_at_Hist1h3c_5end,CAGE_peak_4_at_Hist1h3d_5end,CAGE_peak_4_at_Hist2h3b_5end | |||
|id=chr13:23636327..23636345,+ | |||
|ontology_enrichment_celltype=CL:0000049!9.96e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,9.96e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=191.538021137334,93.5254092473488,74.6198752598839,38.1104906246606,69.1236107325959,277.000798654618,234.780703798503,97.4881091983901,21.8222519335083,28.3218076849612,33.7299397404245,36.6154209788594,64.7138759139958,76.4928521166227,1829.77192165344,3207.81566125701,5455.18352564329,184.860828899927,168.513638901453,548.311430123055,55.9584849194039,636.454997197675,631.319890348807,227.669217635018,340.902191665815,230.841249574238,297.225777349762,249.731158682945,230.878454639494,439.036486041799,554.769737659572,7608.9375293933,5199.14264945237,8954.21497737229,772.389231214908,1246.26113625262,900.386861117048,1800.10454379944,2958.91694971163,1431.83743976834,1236.46258784119,1884.52249300035,1005.97745148055,53.6320444575959,39.7397570380497,37.9941776974681,201.856966841794,231.978766388795,50.308135846194,29.9422044574396,96.1706716566241,133.689884859424,176.003953754565,96.4731648875088,82.0068869907612,96.4722885134801,68.4814921453629,36.097046459421,148.095649349226,139.124627548545,147.68271701694,215.166277863899,216.098635455007,76.9414258275596,115.697364420336,105.151057012023,227.096883772951,239.75222252065,267.00075169433,408.392963453364,381.739804852758,108.547374073445,103.808214247258,476.121736548526,437.151193314176,309.776731087577,29.731287869835,12.896421146604,9.06278546211836,98.1233980712642,69.6220967814337,101.578107258568,18.1468949350898,23.6360296213306,16.8078072554491,124.922520240835,71.3282120803506,76.7965716800238,24.2323818666189,117.740490646372,70.4370707545077,47.3233132339763,3.39985666853875,11.873470216032,14.2950811838487,9.85659151614138,113.759980306719,207.413702577496,381.106068752408,265.358020457266,176.899335239511,75.7126216744475,10.1922095882658,7.11066703153331,874.623805685305,699.779948442222,702.173454125534,108.588869612826,57.2252722860249,16.7739617143252,465.287646386776,375.710400237182,219.545953387768,142.432895322228,78.6668450737865,34.1813128416717,9.39340877390621,12.7247434089522,575.881469319368,183.605374690309,436.382840477738,586.699056293619,72.6927868750676,5.85561594023094,8.3778682725382,121.853015334498,4404.04453146411,3808.18253634615,3129.48555235544,5.99162557619291,11.8950156732843,55.1622605775475,10.7771078519211,5.8814555185976,9.97382613885888,10.5456820994042,176.793135644149,407.308421777445,39.9301958325206,17.2562321826909,477.151664344235,754.998510959525,374.709292124932,409.917104513145,267.315405165567,359.743326559858,322.802441108266,12.6764651662118,641.530346968138,343.038429424424,239.997333359626,327.916815711652,242.179154075496,128.505049446679,132.729477983124,328.605574517332,1391.08432406752,1643.9384306488,1959.8756553314,257.043083716558,305.352930095387,234.26074196078,155.304546543898,172.365467010726,205.020993027326,165.56416866229,151.574471790785,96.9152341647507,56.6085883702373,47.2802296547794,17.5108628619048,20.1755982646959,27.2242142960903,29.3912057085214,12.6173969138476,44.0431740983337,17.5121954981413,141.216602598333,458.996315151823,429.637842941811,250.904947194116,160.338402075557,138.541521315354,159.409074682325,169.881404032935,93.0549094190661,130.44297336734,145.23822459004,92.2180132073438,119.542981351011,133.789452872436,95.5878111620963,639.749829914745,405.582219764537,247.957018480777,326.453078536039,227.11836247329,117.828177415735,70.1925562079256,23.7652338247159,29.3587621063371,29.6153193412321,16.6013471168803,749.301369770978,905.1541724963,941.497664555383,1233.3895380421,1146.79739462274,1251.99531320924,803.535311900114,744.200690897412,626.549144895202,189.774032616108,219.563159124417,89.8668498569934,26.2682033064996,49.3342887185259,11.0962009913574,40.2761954563198,683.874505079679,363.085967512834,596.484231414011,444.033949761846,184.424389443439,84.0294052327629,26.3430424608028,87.0145995466174,129.999772823831,42.5744232315491,23.2685906896348,34.8823663369109,46.8662949804097,25.6345182696763,48.4076058598651,64.4211197654937,47.1851836181093,6.74312477948726,6.32943107597897,377.21430931173,48.2219470960352,262.187330334909,253.785183792815,159.844161117737,129.521088490283,114.741317152433,119.458295992887,165.972387686707,101.120526837314,86.1727355923421,17.3513510867776,47.6918686299783,292.205655617966,160.932315841333,33.6539050863972,23.8941249011933,733.925863096509,444.717952295149,265.555952296305,167.731475156279,99.9164230817764,82.955482106999,152.684166380552,171.475239003051,58.466800218126,44.2758156014995,40.2228618667929,21.1072555567349,459.155789779841,394.543985537401,244.98723104111,105.517439017153,194.778748821461,119.956236018946,281.32561298189,107.244970585116,21.8187032989735,17.642271844397,47.4872408471463,76.3726738271633,132.869373616727,214.392729829633,131.969283395029,107.847909553045,7.04616147639937,983.874531634036,481.087789222272,723.184629378724,2354.79408101564,1461.5346827932,1117.12381976745,1158.91293569811,1360.32811658596,1307.50995216365,1.90934123603023,355.5616567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| |||
|short_description=p3@Hist1h3e,p3@Hist1h3f,p3@Hist2h3c1,p3@Hist2h3c2-ps,p4@Hist1h3b,p4@Hist1h3c,p4@Hist1h3d,p4@Hist2h3b | |||
}} |
Revision as of 00:10, 13 September 2013
Short description: | p3@Hist1h3e, p3@Hist1h3f, p3@Hist2h3c1, p3@Hist2h3c2-ps, p4@Hist1h3b, p4@Hist1h3c, p4@Hist1h3d, p4@Hist2h3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hist1h3e_5end, CAGE_peak_3_at_Hist1h3f_5end, CAGE_peak_3_at_Hist2h3c1_5end, CAGE_peak_3_at_Hist2h3c2-ps_5end, CAGE_peak_4_at_Hist1h3b_5end, CAGE_peak_4_at_Hist1h3c_5end, CAGE_peak_4_at_Hist1h3d_5end, CAGE_peak_4_at_Hist2h3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:154 |
Association with transcript: | 406bp_to_ENSMUST00000075558, NM_013548, uc007ptz.2_5end |
EntrezGene: | 15077,260423,319148,319149,319150,319151,319154,97114 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 9.96e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.